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run fix_outdated on GCZ
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usegalaxy.cz/annotation.yml.lock

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@@ -60,9 +60,9 @@ tools:
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- name: tbprofiler
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owner: iuc
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tool_panel_section_id: annotation
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tool_panel_section_label: Annotation
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- name: hmmer_nhmmer
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owner: iuc
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tool_panel_section_id: annotation
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tool_panel_section_label: Annotation
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- name: hmmer_hmmscan
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- name: hmmer_jackhmmer
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owner: iuc
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tool_panel_section_id: annotation
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tool_panel_section_label: Annotation
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- name: kofamscan
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owner: iuc
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tool_panel_section_id: annotation
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tool_panel_section_label: Annotation
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- name: tbl2gff3
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- name: ectyper
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owner: nml
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tool_panel_section_id: annotation
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tool_panel_section_label: Annotation
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- name: sistr_cmd
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- name: fastani
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owner: iuc
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tool_panel_section_id: annotation
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tool_panel_section_label: Annotation
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- name: fargene
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owner: iuc
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tool_panel_section_id: annotation
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tool_panel_section_label: Annotation
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- name: transtermhp
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owner: iuc
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tool_panel_section_id: annotation
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tool_panel_section_label: Annotation
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- name: nucleosome_prediction
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owner: bgruening
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tool_panel_section_id: annotation
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tool_panel_section_label: Annotation
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- name: hmmer_alimask
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owner: iuc
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tool_panel_section_id: annotation
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tool_panel_section_label: Annotation
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- name: hmmer_hmmalign
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owner: iuc
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tool_panel_section_id: annotation
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tool_panel_section_label: Annotation
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- name: hmmer_hmmconvert
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owner: iuc
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tool_panel_section_id: annotation
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tool_panel_section_label: Annotation
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- name: hmmer_hmmemit
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owner: iuc
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tool_panel_section_id: annotation
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tool_panel_section_label: Annotation
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- name: hmmer_hmmfetch
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owner: iuc
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tool_panel_section_id: annotation
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- name: find_subsequences
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owner: iuc
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tool_panel_section_label: Annotation
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- name: spotyping
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- name: homer_gtf_to_annotations
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owner: iuc
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tool_panel_section_id: annotation
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tool_panel_section_label: Annotation
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- name: hamronize_tool
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owner: iuc
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tool_panel_section_id: annotation
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tool_panel_section_label: Annotation
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- name: hamronize_summarize
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owner: iuc
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revisions:
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tool_panel_section_id: annotation
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tool_panel_section_label: Annotation
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- name: gecco
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- name: miniprot
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owner: iuc
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revisions:
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tool_panel_section_id: annotation
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- name: miniprot_index
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owner: iuc
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revisions:
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tool_panel_section_id: annotation
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tool_panel_section_label: Annotation
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- name: red
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owner: iuc
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revisions:
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tool_panel_section_id: annotation
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tool_panel_section_label: Annotation
@@ -787,7 +780,6 @@ tools:
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tool_panel_section_id: annotation
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tool_panel_section_label: Annotation
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- name: pfamscan
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owner: cpt
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tool_panel_section_id: annotation
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tool_panel_section_label: Annotation
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- name: cpt_intron_detection
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owner: cpt
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tool_panel_section_id: annotation
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tool_panel_section_label: Annotation
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- name: cpt_gbk_renumber
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owner: cpt
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tool_panel_section_id: annotation
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tool_panel_section_label: Annotation
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- name: cpt_annotation_table
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owner: cpt
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revisions:
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tool_panel_section_id: annotation
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tool_panel_section_label: Annotation
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- name: cpt_gff_rebase
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owner: cpt
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revisions:
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tool_panel_section_id: annotation
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tool_panel_section_label: Annotation
@@ -889,28 +876,24 @@ tools:
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- name: cpt_fix_sixpack
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owner: cpt
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tool_panel_section_id: annotation
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tool_panel_section_label: Annotation
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- name: cpt_shinefind
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owner: cpt
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revisions:
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tool_panel_section_id: annotation
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- name: cpt_type_filter
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owner: cpt
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tool_panel_section_id: annotation
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tool_panel_section_label: Annotation
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- name: cpt_req_phage_start
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owner: cpt
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revisions:
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owner: cpt
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- name: agat
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tool_panel_section_id: annotation
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tool_panel_section_label: Annotation
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- name: funannotate_compare
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owner: iuc
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tool_panel_section_id: annotation
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- name: funannotate_sort

usegalaxy.cz/assembly.yml.lock

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- name: rnaquast
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tool_panel_section_id: assembly
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- name: verkko
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- name: trycycler_cluster
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- name: miniasm
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- name: unicycler
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tool_panel_section_id: assembly
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- name: blobtoolkit

usegalaxy.cz/biodiversity_data_exploration.yml.lock

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- name: obisindicators
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tool_panel_section_id: biodiversity_data_exploration
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tool_panel_section_label: Biodiversity data exploration

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