grangers/Cargo.toml at main · COMBINE-lab/grangers · GitHub

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[package]
name = "grangers"
version = "0.5.0"
edition = "2021"
authors = ["Dongze He <dhe17@umd.edu>", "Rob Patro <rob@cs.umd.edu>"]
description = "A rust library for working with genomic ranges and annotations."
license-file = "LICENSE"
readme = "README.md"
repository = "https://github.com/COMBINE-lab/grangers"
homepage = "https://github.com/COMBINE-lab/grangers"
include = [
  "/src/lib.rs",
  "/src/grangers_info.rs",
  "/src/grangers_utils.rs",
  "/src/options.rs",
  "/src/reader.rs",
  "/src/reader/*.rs",
  "/Cargo.toml",
  "/Cargo.lock",
  "/README.md",
  "/LICENSE",
]
keywords = ["genomics", "GTF-GFF", "ranges", "genes", "genome-annotation"]
categories = ["science", "data-structures"]

[lib]
doctest = false

[dependencies]
anyhow = "1.0"
flate2 = { version = "1.0.35", features = [
  "zlib-ng",
], default-features = false }
noodles = { version = "0.90.0", features = ["gtf", "gff", "fasta", "core"] }
tracing = "0.1.41"
polars = { version = "0.45.1", features = [
  "lazy",
  "dataframe_arithmetic",
  "checked_arithmetic",
  "rows",
  "dtype-struct",
  "dtype-categorical",
  "list_eval",
  "concat_str",
  "strings",
  "is_in",
  "abs",
] }
rust-lapper = "1.1.0"
lazy_static = "1.5.0"
nutype = "0.5.1"