added scm

Author: fra-pcmgf

.github/workflows/documentation.yml

@@ -29,7 +29,9 @@ jobs:
           python-version: '3.11'
       - name: Install dependencies
         run: |
+          python -m pip install --upgrade pip
           pip install -r docs/requirements.txt
+          pip install -e .
       - name: Sphinx build
         run: |
           sphinx-build docs/source _build

.gitignore

@@ -160,3 +160,4 @@ cython_debug/
 .idea/
 
 /docs/build/
+/dyson_equalizer/_version.py

docs/requirements.txt

@@ -5,3 +5,4 @@ intersphinx-registry
 myst-parser
 numpydoc
 pydata-sphinx-theme
+flit_scm

docs/source/conf.py

@@ -1,6 +1,8 @@
 import numpy
 import os
 import sys
+from importlib.metadata import version
+
 sys.path.insert(0, os.path.abspath('..'))
 sys.path.insert(0, os.path.abspath('../..'))
 
@@ -15,7 +17,11 @@
 project = 'Dyson Equalizer'
 copyright = '2024, Boris Landa, Francesco Strino, Yuval Kluger'
 author = 'Boris Landa, Francesco Strino, Yuval Kluger'
-release = '0.1.3'
+
+# scm version (https://pypi.org/project/setuptools-scm/7.0.5/)
+release_scm = version('dyson-equalizer')
+release = '.'.join(release_scm.split('.')[:3])
+version = release
 
 # -- General configuration ---------------------------------------------------
 # https://www.sphinx-doc.org/en/master/usage/configuration.html#general-configuration
@@ -44,12 +50,26 @@
 
 html_context = {
     "default_mode": "light",
+    "github_user": "KlugerLab",
+    "github_repo": "DysonEqualizer",
+    "github_version": "main",
+    "doc_path": "docs",
 }
 
 html_sidebars = {
-  "examples": []
+    "examples": []
 }
 
+html_theme_options = {
+    "icon_links": [
+        {
+            "name": "GitHub",
+            "url": "https://github.com/KlugerLab/DysonEqualizer",
+            "icon": "fa-brands fa-square-github",
+            "type": "fontawesome",
+        },
+    ],
+}
 
 intersphinx_mapping = {
     'python': ('https://docs.python.org/3', None),

pyproject.toml

@@ -1,10 +1,10 @@
 [build-system]
-requires = ["flit_core >=3.2,<4"]
-build-backend = "flit_core.buildapi"
+requires = ["flit_core", "flit_scm"]
+build-backend = "flit_scm:buildapi"
 
 [project]
 name = "dyson-equalizer"
-version = "0.1.3"
+dynamic = ['version']
 description = "Computes the Dyson Equalizer and related low rank approximation of the input data"
 license = {file = "LICENSE"}
 readme = "README.md"
@@ -32,8 +32,14 @@ dependencies = [
     "numpy>=1.25",
 ]
 
+[tool.flit.sdist]
+exclude = [".gitignore"]
+
+[tool.setuptools_scm]
+write_to = "dyson_equalizer/_version.py"
+
 [project.optional-dependencies]
-dev = ["pytest", "twine"]
+dev = ["pytest", "flit_core", "flit_scm"]
 
 [project.urls]
 Documentation = "https://github.com/KlugerLab/DysonEqualizer.git"