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gridssID #690

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avrajit opened this issue Jan 16, 2025 · 0 comments
Open

gridssID #690

avrajit opened this issue Jan 16, 2025 · 0 comments

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@avrajit
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avrajit commented Jan 16, 2025

This is not a error or bug . I just didn't get a proper explanination thus writing here. Please expian.
I ran gridss on WGS data and annotated with SVAnnotator. There is no issue in this part. When I am checking result of 'inversion' SV data I found that the ID column have same gridss ID like gridss3ff_12011h and gridss3ff_12011o only 'h' and 'o' is the difference.
and if I chcek start and end position it is just 1 base differnce in both.
What is these two IDs mean?
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@avrajit