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Merge pull request #2 from Reed-CompBio/STRWR #19

Merge pull request #2 from Reed-CompBio/STRWR

Merge pull request #2 from Reed-CompBio/STRWR #19

Triggered via push June 10, 2025 19:48
Status Failure
Total duration 5m 41s
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test-spras.yml

on: push
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Matrix: Test conda environment
Matrix: Run test cases and workflow
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2 errors and 19 warnings
Run pre-commit checks
Process completed with exit code 1.
Run test cases and workflow (ubuntu-latest)
Process completed with exit code 1.
Test conda environment (macos-latest)
/Users/runner/miniconda3/lib/python3.13/argparse.py:1255: FutureWarning: `remote_definition` is deprecated and will be removed in 25.9. Use `conda env create --file=URL` instead. subnamespace, arg_strings = subparser.parse_known_args(arg_strings, None)
Test conda environment (macos-latest)
/Users/runner/miniconda3/lib/python3.13/site-packages/conda/base/context.py:198: FutureWarning: Adding 'defaults' to channel list implicitly is deprecated and will be removed in 25.9. To remove this warning, please choose a default channel explicitly with conda's regular configuration system, e.g. by adding 'defaults' to the list of channels: conda config --add channels defaults For more information see https://docs.conda.io/projects/conda/en/stable/user-guide/configuration/use-condarc.html deprecated.topic(
Test conda environment (macos-latest)
entry_point.py:256: DeprecationWarning: Python 3.14 will, by default, filter extracted tar archives and reject files or modify their metadata. Use the filter argument to control this behavior.
Test conda environment (macos-latest)
entry_point.py:256: DeprecationWarning: Python 3.14 will, by default, filter extracted tar archives and reject files or modify their metadata. Use the filter argument to control this behavior.
Test conda environment (macos-latest)
entry_point.py:256: DeprecationWarning: Python 3.14 will, by default, filter extracted tar archives and reject files or modify their metadata. Use the filter argument to control this behavior.
Run test cases and workflow (ubuntu-latest)
/usr/share/miniconda3/lib/python3.13/argparse.py:1255: FutureWarning: `remote_definition` is deprecated and will be removed in 25.9. Use `conda env create --file=URL` instead. subnamespace, arg_strings = subparser.parse_known_args(arg_strings, None)
Run test cases and workflow (ubuntu-latest)
/usr/share/miniconda3/lib/python3.13/site-packages/conda/base/context.py:198: FutureWarning: Adding 'defaults' to channel list implicitly is deprecated and will be removed in 25.9. To remove this warning, please choose a default channel explicitly with conda's regular configuration system, e.g. by adding 'defaults' to the list of channels: conda config --add channels defaults For more information see https://docs.conda.io/projects/conda/en/stable/user-guide/configuration/use-condarc.html deprecated.topic(
Run test cases and workflow (ubuntu-latest)
entry_point.py:256: DeprecationWarning: Python 3.14 will, by default, filter extracted tar archives and reject files or modify their metadata. Use the filter argument to control this behavior.
Run test cases and workflow (ubuntu-latest)
entry_point.py:256: DeprecationWarning: Python 3.14 will, by default, filter extracted tar archives and reject files or modify their metadata. Use the filter argument to control this behavior.
Run test cases and workflow (ubuntu-latest)
entry_point.py:256: DeprecationWarning: Python 3.14 will, by default, filter extracted tar archives and reject files or modify their metadata. Use the filter argument to control this behavior.
Test conda environment (windows-latest)
C:\Miniconda3\Lib\argparse.py:1255: FutureWarning: `remote_definition` is deprecated and will be removed in 25.9. Use `conda env create --file=URL` instead. subnamespace, arg_strings = subparser.parse_known_args(arg_strings, None)
Test conda environment (windows-latest)
WARNING conda.common.path.windows:_path_to(100): cygpath is not available, fallback to manual path conversion
Test conda environment (windows-latest)
WARNING conda.common.path.windows:_path_to(100): cygpath is not available, fallback to manual path conversion
Test conda environment (windows-latest)
WARNING conda.common.path.windows:_path_to(100): cygpath is not available, fallback to manual path conversion
Test conda environment (windows-latest)
WARNING conda.common.path.windows:_path_to(100): cygpath is not available, fallback to manual path conversion
Test conda environment (windows-latest)
WARNING conda.common.path.windows:_path_to(100): cygpath is not available, fallback to manual path conversion
Test conda environment (windows-latest)
C:\Miniconda3\Lib\site-packages\conda\base\context.py:198: FutureWarning: Adding 'defaults' to channel list implicitly is deprecated and will be removed in 25.9. To remove this warning, please choose a default channel explicitly with conda's regular configuration system, e.g. by adding 'defaults' to the list of channels: conda config --add channels defaults For more information see https://docs.conda.io/projects/conda/en/stable/user-guide/configuration/use-condarc.html deprecated.topic(
Test conda environment (windows-latest)
Terminal profiles are not available for system level installs
Test conda environment (windows-latest)
Terminal profiles are not available for system level installs