Tutorial on SIS gives Discretization failed with ArgumentError: dS => 0.5 is not a parameter

[PeterARBork]

Describe the bug 🐞

Tutorial on SIS gives Discretization failed with ArgumentError: dS => 0.5 is not a parameter.

The error can be avoided by using ] compat MethodOfLines =0.11.0, so a bug may have been introduced in later versions of MOL.

Expected behavior

Tutorial is expected to complete its computations.

Minimal Reproducible Example 👇
Simply copy the SIS example (below) and run it on a clean instantiation of julia 1.11.1. It will fail at the call to 'discretize'.

using DifferentialEquations, ModelingToolkit, MethodOfLines, DomainSets, Plots

# Parameters, variables, and derivatives
@parameters t x
@parameters dS dI brn ϵ
@variables S(..) I(..)
Dt = Differential(t)
Dx = Differential(x)
Dxx = Differential(x)^2

# Define functions
function γ(x)
    y = x + 1.0
    return y
end

function ratio(x, brn, ϵ)
    y = brn + ϵ * sin(2 * pi * x)
    return y
end

# 1D PDE and boundary conditions
eq = [
    Dt(S(t, x)) ~ dS * Dxx(S(t, x)) -
                  ratio(x, brn, ϵ) * γ(x) * S(t, x) * I(t, x) / (S(t, x) + I(t, x)) +
                  γ(x) * I(t, x),
    Dt(I(t, x)) ~ dI * Dxx(I(t, x)) +
                  ratio(x, brn, ϵ) * γ(x) * S(t, x) * I(t, x) / (S(t, x) + I(t, x)) -
                  γ(x) * I(t, x)]
bcs = [S(0, x) ~ 0.9 + 0.1 * sin(2 * pi * x),
    I(0, x) ~ 0.1 + 0.1 * cos(2 * pi * x),
    Dx(S(t, 0)) ~ 0.0,
    Dx(S(t, 1)) ~ 0.0,
    Dx(I(t, 0)) ~ 0.0,
    Dx(I(t, 1)) ~ 0.0]

# Space and time domains
domains = [t ∈ Interval(0.0, 10.0),
    x ∈ Interval(0.0, 1.0)]

# PDE system
@named pdesys = PDESystem(eq, bcs, domains, [t, x], [S(t, x), I(t, x)], [dS, dI, brn, ϵ];
    defaults = Dict(dS => 0.5, dI => 0.1, brn => 3, ϵ => 0.1))

# Method of lines discretization
# Need a small dx here for accuracy
dx = 0.01
order = 2
discretization = MOLFiniteDifference([x => dx], t)

# Convert the PDE problem into an ODE problem
prob = discretize(pdesys, discretization);

Error & Stacktrace ⚠️

The system of equations is:

Discretization failed, please post an issue on https://github.com/SciML/MethodOfLines.jl with the failing code and system at low point count.

ERROR: ArgumentError: dS => 0.5 is not a parameter.
Stacktrace:
 [1] check_parameters
   @ ~/.julia/packages/ModelingToolkit/YLJ0I/src/utils.jl:127 [inlined]
 [2] ODESystem(tag::UInt64, deqs::Vector{…}, iv::SymbolicUtils.BasicSymbolic{…}, dvs::Vector{…}, ps::Vector{…}, tspan::Nothing, var_to_name::Dict{…}, ctrls::Vector{…}, observed::Vector{…}, tgrad::Base.RefValue{…}, jac::Base.RefValue{…}, ctrl_jac::Base.RefValue{…}, Wfact::Base.RefValue{…}, Wfact_t::Base.RefValue{…}, name::Symbol, description::String, systems::Vector{…}, defaults::Dict{…}, guesses::Dict{…}, torn_matching::Nothing, initializesystem::Nothing, initialization_eqs::Vector{…}, schedule::Nothing, connector_type::Nothing, preface::Nothing, cevents::Vector{…}, devents::Vector{…}, parameter_dependencies::Vector{…}, assertions::Dict{…}, metadata::MethodOfLines.MOLMetadata{…}, gui_metadata::Nothing, is_dde::Bool, tstops::Vector{…}, tearing_state::Nothing, substitutions::Nothing, complete::Bool, index_cache::Nothing, discrete_subsystems::Nothing, solved_unknowns::Nothing, split_idxs::Nothing, parent::Nothing; checks::Bool)
   @ ModelingToolkit ~/.julia/packages/ModelingToolkit/YLJ0I/src/systems/diffeqs/odesystem.jl:207
 [3] ODESystem
   @ ~/.julia/packages/ModelingToolkit/YLJ0I/src/systems/diffeqs/odesystem.jl:194 [inlined]
 [4] ODESystem(deqs::Vector{…}, iv::Num, dvs::Vector{…}, ps::Vector{…}; controls::Vector{…}, observed::Vector{…}, systems::Vector{…}, tspan::Nothing, name::Symbol, description::String, default_u0::Dict{…}, default_p::Dict{…}, defaults::Dict{…}, guesses::Dict{…}, initializesystem::Nothing, initialization_eqs::Vector{…}, schedule::Nothing, connector_type::Nothing, preface::Nothing, continuous_events::Nothing, discrete_events::Nothing, parameter_dependencies::Vector{…}, assertions::Dict{…}, checks::Bool, metadata::MethodOfLines.MOLMetadata{…}, gui_metadata::Nothing, is_dde::Nothing, tstops::Vector{…}, discover_from_metadata::Bool)
   @ ModelingToolkit ~/.julia/packages/ModelingToolkit/YLJ0I/src/systems/diffeqs/odesystem.jl:301
 [5] generate_system(disc_state::PDEBase.EquationState, s::MethodOfLines.DiscreteSpace{…}, u0::Vector{…}, tspan::Tuple{…}, metadata::MethodOfLines.MOLMetadata{…}, disc::MOLFiniteDifference{…})
   @ PDEBase ~/.julia/packages/PDEBase/VVGPP/src/discretization_state.jl:40
 [6] symbolic_discretize(pdesys::PDESystem, discretization::MOLFiniteDifference{…})
   @ PDEBase ~/.julia/packages/PDEBase/VVGPP/src/symbolic_discretize.jl:89
 [7] discretize(pdesys::PDESystem, discretization::MOLFiniteDifference{…}; analytic::Nothing, kwargs::@Kwargs{})
   @ PDEBase ~/.julia/packages/PDEBase/VVGPP/src/discretization_state.jl:57
 [8] discretize(pdesys::PDESystem, discretization::MOLFiniteDifference{…})
   @ PDEBase ~/.julia/packages/PDEBase/VVGPP/src/discretization_state.jl:54
 [9] top-level scope
   @ ~/Documents/GitHub/SmallLargeClearance/scripts/MOLSIStutorial.jl:1
Some type information was truncated. Use `show(err)` to see complete types.

Environment (please complete the following information):

• Output of using Pkg; Pkg.status()

Status `~/Documents/GitHub/SmallLargeClearance/Project.toml`
  [336ed68f] CSV v0.10.15
  [a93c6f00] DataFrames v1.7.0
  [0c46a032] DifferentialEquations v7.16.0
  [5b8099bc] DomainSets v0.7.15
  [a98d9a8b] Interpolations v0.15.1
  [b964fa9f] LaTeXStrings v1.4.0
  [94925ecb] MethodOfLines v0.11.7
  [961ee093] ModelingToolkit v9.64.1
  [1dea7af3] OrdinaryDiffEq v6.91.0
  [d96e819e] Parameters v0.12.3
  [91a5bcdd] Plots v1.40.9
  [10745b16] Statistics v1.11.1
  [37e2e46d] LinearAlgebra v1.11.0

• Output of using Pkg; Pkg.status(; mode = PKGMODE_MANIFEST)

Status `~/Documents/GitHub/SmallLargeClearance/Manifest.toml`
  [47edcb42] ADTypes v1.13.0
  [1520ce14] AbstractTrees v0.4.5
  [7d9f7c33] Accessors v0.1.41
  [79e6a3ab] Adapt v4.2.0
  [66dad0bd] AliasTables v1.1.3
  [a95523ee] AlmostBlockDiagonals v0.1.10
  [ec485272] ArnoldiMethod v0.4.0
  [4fba245c] ArrayInterface v7.18.0
  [4c555306] ArrayLayouts v1.11.1
  [13072b0f] AxisAlgorithms v1.1.0
  [aae01518] BandedMatrices v1.9.1
  [e2ed5e7c] Bijections v0.1.9
  [d1d4a3ce] BitFlags v0.1.9
  [62783981] BitTwiddlingConvenienceFunctions v0.1.6
  [8e7c35d0] BlockArrays v1.4.0
  [764a87c0] BoundaryValueDiffEq v5.15.0
  [7227322d] BoundaryValueDiffEqAscher v1.4.0
  [56b672f2] BoundaryValueDiffEqCore v1.7.0
  [85d9eb09] BoundaryValueDiffEqFIRK v1.5.0
  [1a22d4ce] BoundaryValueDiffEqMIRK v1.5.0
  [9255f1d6] BoundaryValueDiffEqMIRKN v1.4.0
  [ed55bfe0] BoundaryValueDiffEqShooting v1.5.0
  [70df07ce] BracketingNonlinearSolve v1.1.0
  [fa961155] CEnum v0.5.0
  [2a0fbf3d] CPUSummary v0.2.6
  [00ebfdb7] CSTParser v3.4.3
  [336ed68f] CSV v0.10.15
  [d360d2e6] ChainRulesCore v1.25.1
  [fb6a15b2] CloseOpenIntervals v0.1.13
  [944b1d66] CodecZlib v0.7.8
  [35d6a980] ColorSchemes v3.29.0
  [3da002f7] ColorTypes v0.12.0
  [c3611d14] ColorVectorSpace v0.11.0
  [5ae59095] Colors v0.13.0
  [861a8166] Combinatorics v1.0.2
  [a80b9123] CommonMark v0.8.15
  [38540f10] CommonSolve v0.2.4
  [bbf7d656] CommonSubexpressions v0.3.1
  [f70d9fcc] CommonWorldInvalidations v1.0.0
  [34da2185] Compat v4.16.0
  [b152e2b5] CompositeTypes v0.1.4
  [a33af91c] CompositionsBase v0.1.2
  [2569d6c7] ConcreteStructs v0.2.3
  [f0e56b4a] ConcurrentUtilities v2.5.0
  [187b0558] ConstructionBase v1.5.8
  [d38c429a] Contour v0.6.3
  [adafc99b] CpuId v0.3.1
  [a8cc5b0e] Crayons v4.1.1
  [9a962f9c] DataAPI v1.16.0
  [a93c6f00] DataFrames v1.7.0
  [864edb3b] DataStructures v0.18.20
  [e2d170a0] DataValueInterfaces v1.0.0
  [bcd4f6db] DelayDiffEq v5.52.0
  [8bb1440f] DelimitedFiles v1.9.1
  [2b5f629d] DiffEqBase v6.164.1
  [459566f4] DiffEqCallbacks v4.3.0
  [77a26b50] DiffEqNoiseProcess v5.24.1
  [163ba53b] DiffResults v1.1.0
  [b552c78f] DiffRules v1.15.1
  [0c46a032] DifferentialEquations v7.16.0
  [a0c0ee7d] DifferentiationInterface v0.6.42
  [8d63f2c5] DispatchDoctor v0.4.19
  [b4f34e82] Distances v0.10.12
  [31c24e10] Distributions v0.25.117
  [ffbed154] DocStringExtensions v0.9.3
  [5b8099bc] DomainSets v0.7.15
  [7c1d4256] DynamicPolynomials v0.6.1
  [06fc5a27] DynamicQuantities v1.4.0
  [4e289a0a] EnumX v1.0.4
  [f151be2c] EnzymeCore v0.8.8
  [460bff9d] ExceptionUnwrapping v0.1.11
  [d4d017d3] ExponentialUtilities v1.27.0
  [e2ba6199] ExprTools v0.1.10
⌅ [6b7a57c9] Expronicon v0.8.5
  [55351af7] ExproniconLite v0.10.14
  [c87230d0] FFMPEG v0.4.2
  [9d29842c] FastAlmostBandedMatrices v0.1.4
  [7034ab61] FastBroadcast v0.3.5
  [9aa1b823] FastClosures v0.3.2
  [442a2c76] FastGaussQuadrature v1.0.2
  [a4df4552] FastPower v1.1.1
  [48062228] FilePathsBase v0.9.23
  [1a297f60] FillArrays v1.13.0
  [64ca27bc] FindFirstFunctions v1.4.1
  [6a86dc24] FiniteDiff v2.27.0
  [53c48c17] FixedPointNumbers v0.8.5
  [1fa38f19] Format v1.3.7
  [f6369f11] ForwardDiff v0.10.38
  [069b7b12] FunctionWrappers v1.1.3
  [77dc65aa] FunctionWrappersWrappers v0.1.3
  [d9f16b24] Functors v0.5.2
  [46192b85] GPUArraysCore v0.2.0
  [28b8d3ca] GR v0.73.13
  [c145ed77] GenericSchur v0.5.4
  [c27321d9] Glob v1.3.1
  [86223c79] Graphs v1.12.0
  [42e2da0e] Grisu v1.0.2
  [cd3eb016] HTTP v1.10.15
  [34004b35] HypergeometricFunctions v0.3.27
  [615f187c] IfElse v0.1.1
  [d25df0c9] Inflate v0.1.5
  [842dd82b] InlineStrings v1.4.3
  [18e54dd8] IntegerMathUtils v0.1.2
  [a98d9a8b] Interpolations v0.15.1
  [8197267c] IntervalSets v0.7.10
  [3587e190] InverseFunctions v0.1.17
  [41ab1584] InvertedIndices v1.3.1
  [92d709cd] IrrationalConstants v0.2.4
  [82899510] IteratorInterfaceExtensions v1.0.0
  [1019f520] JLFzf v0.1.9
  [692b3bcd] JLLWrappers v1.7.0
  [682c06a0] JSON v0.21.4
  [ae98c720] Jieko v0.2.1
  [98e50ef6] JuliaFormatter v1.0.62
  [ccbc3e58] JumpProcesses v9.14.2
  [ba0b0d4f] Krylov v0.9.10
  [b964fa9f] LaTeXStrings v1.4.0
  [23fbe1c1] Latexify v0.16.6
  [10f19ff3] LayoutPointers v0.1.17
  [5078a376] LazyArrays v2.6.0
  [2d8b4e74] LevyArea v1.0.0
  [87fe0de2] LineSearch v0.1.4
  [d3d80556] LineSearches v7.3.0
  [7ed4a6bd] LinearSolve v3.3.1
  [2ab3a3ac] LogExpFunctions v0.3.29
  [e6f89c97] LoggingExtras v1.1.0
  [d8e11817] MLStyle v0.4.17
  [1914dd2f] MacroTools v0.5.15
  [d125e4d3] ManualMemory v0.1.8
  [a3b82374] MatrixFactorizations v3.0.1
  [bb5d69b7] MaybeInplace v0.1.4
  [739be429] MbedTLS v1.1.9
  [442fdcdd] Measures v0.3.2
  [94925ecb] MethodOfLines v0.11.7
  [e1d29d7a] Missings v1.2.0
  [961ee093] ModelingToolkit v9.64.1
  [2e0e35c7] Moshi v0.3.5
  [46d2c3a1] MuladdMacro v0.2.4
  [102ac46a] MultivariatePolynomials v0.5.7
  [d8a4904e] MutableArithmetics v1.6.4
  [d41bc354] NLSolversBase v7.8.3
  [2774e3e8] NLsolve v4.5.1
  [77ba4419] NaNMath v1.1.2
  [8913a72c] NonlinearSolve v4.4.0
  [be0214bd] NonlinearSolveBase v1.5.0
  [5959db7a] NonlinearSolveFirstOrder v1.3.0
  [9a2c21bd] NonlinearSolveQuasiNewton v1.2.0
  [26075421] NonlinearSolveSpectralMethods v1.1.0
  [6fe1bfb0] OffsetArrays v1.15.0
  [4d8831e6] OpenSSL v1.4.3
  [429524aa] Optim v1.11.0
  [bac558e1] OrderedCollections v1.8.0
  [1dea7af3] OrdinaryDiffEq v6.91.0
  [89bda076] OrdinaryDiffEqAdamsBashforthMoulton v1.2.0
  [6ad6398a] OrdinaryDiffEqBDF v1.2.0
  [bbf590c4] OrdinaryDiffEqCore v1.18.1
  [50262376] OrdinaryDiffEqDefault v1.3.0
  [4302a76b] OrdinaryDiffEqDifferentiation v1.4.0
  [9286f039] OrdinaryDiffEqExplicitRK v1.1.0
  [e0540318] OrdinaryDiffEqExponentialRK v1.3.0
  [becaefa8] OrdinaryDiffEqExtrapolation v1.4.0
  [5960d6e9] OrdinaryDiffEqFIRK v1.7.0
  [101fe9f7] OrdinaryDiffEqFeagin v1.1.0
  [d3585ca7] OrdinaryDiffEqFunctionMap v1.1.1
  [d28bc4f8] OrdinaryDiffEqHighOrderRK v1.1.0
  [9f002381] OrdinaryDiffEqIMEXMultistep v1.2.0
  [521117fe] OrdinaryDiffEqLinear v1.1.0
  [1344f307] OrdinaryDiffEqLowOrderRK v1.2.0
  [b0944070] OrdinaryDiffEqLowStorageRK v1.2.1
  [127b3ac7] OrdinaryDiffEqNonlinearSolve v1.5.0
  [c9986a66] OrdinaryDiffEqNordsieck v1.1.0
  [5dd0a6cf] OrdinaryDiffEqPDIRK v1.2.0
  [5b33eab2] OrdinaryDiffEqPRK v1.1.0
  [04162be5] OrdinaryDiffEqQPRK v1.1.0
  [af6ede74] OrdinaryDiffEqRKN v1.1.0
  [43230ef6] OrdinaryDiffEqRosenbrock v1.6.0
  [2d112036] OrdinaryDiffEqSDIRK v1.2.0
  [669c94d9] OrdinaryDiffEqSSPRK v1.2.0
  [e3e12d00] OrdinaryDiffEqStabilizedIRK v1.2.0
  [358294b1] OrdinaryDiffEqStabilizedRK v1.1.0
  [fa646aed] OrdinaryDiffEqSymplecticRK v1.3.0
  [b1df2697] OrdinaryDiffEqTsit5 v1.1.0
  [79d7bb75] OrdinaryDiffEqVerner v1.1.1
  [a7812802] PDEBase v0.1.17
  [90014a1f] PDMats v0.11.32
  [65ce6f38] PackageExtensionCompat v1.0.2
  [d96e819e] Parameters v0.12.3
  [69de0a69] Parsers v2.8.1
  [b98c9c47] Pipe v1.3.0
  [ccf2f8ad] PlotThemes v3.3.0
  [995b91a9] PlotUtils v1.4.3
  [91a5bcdd] Plots v1.40.9
  [e409e4f3] PoissonRandom v0.4.4
  [f517fe37] Polyester v0.7.16
  [1d0040c9] PolyesterWeave v0.2.2
  [2dfb63ee] PooledArrays v1.4.3
  [85a6dd25] PositiveFactorizations v0.2.4
  [d236fae5] PreallocationTools v0.4.25
  [aea7be01] PrecompileTools v1.2.1
  [21216c6a] Preferences v1.4.3
  [08abe8d2] PrettyTables v2.4.0
  [27ebfcd6] Primes v0.5.6
  [43287f4e] PtrArrays v1.3.0
  [1fd47b50] QuadGK v2.11.2
  [74087812] Random123 v1.7.0
  [e6cf234a] RandomNumbers v1.6.0
  [c84ed2f1] Ratios v0.4.5
  [3cdcf5f2] RecipesBase v1.3.4
  [01d81517] RecipesPipeline v0.6.12
  [731186ca] RecursiveArrayTools v3.30.0
  [189a3867] Reexport v1.2.2
  [05181044] RelocatableFolders v1.0.1
  [ae029012] Requires v1.3.0
  [ae5879a3] ResettableStacks v1.1.1
  [79098fc4] Rmath v0.8.0
  [7e49a35a] RuntimeGeneratedFunctions v0.5.13
  [9dfe8606] SCCNonlinearSolve v1.0.0
  [94e857df] SIMDTypes v0.1.0
  [0bca4576] SciMLBase v2.75.0
  [19f34311] SciMLJacobianOperators v0.1.1
  [c0aeaf25] SciMLOperators v0.3.12
  [53ae85a6] SciMLStructures v1.6.1
  [6c6a2e73] Scratch v1.2.1
  [91c51154] SentinelArrays v1.4.8
  [efcf1570] Setfield v1.1.1
  [992d4aef] Showoff v1.0.3
  [777ac1f9] SimpleBufferStream v1.2.0
  [727e6d20] SimpleNonlinearSolve v2.1.0
  [699a6c99] SimpleTraits v0.9.4
  [ce78b400] SimpleUnPack v1.1.0
  [a2af1166] SortingAlgorithms v1.2.1
  [47a9eef4] SparseDiffTools v2.23.1
  [0a514795] SparseMatrixColorings v0.4.13
  [276daf66] SpecialFunctions v2.5.0
  [860ef19b] StableRNGs v1.0.2
  [aedffcd0] Static v1.1.1
  [0d7ed370] StaticArrayInterface v1.8.0
  [90137ffa] StaticArrays v1.9.12
  [1e83bf80] StaticArraysCore v1.4.3
  [10745b16] Statistics v1.11.1
  [82ae8749] StatsAPI v1.7.0
  [2913bbd2] StatsBase v0.34.4
  [4c63d2b9] StatsFuns v1.3.2
  [9672c7b4] SteadyStateDiffEq v2.4.1
  [789caeaf] StochasticDiffEq v6.74.0
  [7792a7ef] StrideArraysCore v0.5.7
  [892a3eda] StringManipulation v0.4.1
  [c3572dad] Sundials v4.26.1
  [2efcf032] SymbolicIndexingInterface v0.3.38
  [19f23fe9] SymbolicLimits v0.2.2
  [d1185830] SymbolicUtils v3.15.0
  [0c5d862f] Symbolics v6.29.1
  [3783bdb8] TableTraits v1.0.1
  [bd369af6] Tables v1.12.0
  [62fd8b95] TensorCore v0.1.1
  [8ea1fca8] TermInterface v2.0.0
  [1c621080] TestItems v1.0.0
  [8290d209] ThreadingUtilities v0.5.2
  [a759f4b9] TimerOutputs v0.5.27
  [0796e94c] Tokenize v0.5.29
  [3bb67fe8] TranscodingStreams v0.11.3
  [410a4b4d] Tricks v0.1.10
  [781d530d] TruncatedStacktraces v1.4.0
  [5c2747f8] URIs v1.5.1
  [3a884ed6] UnPack v1.0.2
  [1cfade01] UnicodeFun v0.4.1
  [1986cc42] Unitful v1.22.0
  [45397f5d] UnitfulLatexify v1.6.4
  [a7c27f48] Unityper v0.1.6
  [41fe7b60] Unzip v0.2.0
  [19fa3120] VertexSafeGraphs v0.2.0
  [ea10d353] WeakRefStrings v1.4.2
  [897b6980] WeakValueDicts v0.1.0
  [efce3f68] WoodburyMatrices v1.0.0
  [76eceee3] WorkerUtilities v1.6.1
  [6e34b625] Bzip2_jll v1.0.9+0
  [83423d85] Cairo_jll v1.18.2+1
  [ee1fde0b] Dbus_jll v1.14.10+0
  [2702e6a9] EpollShim_jll v0.0.20230411+1
  [2e619515] Expat_jll v2.6.5+0
⌅ [b22a6f82] FFMPEG_jll v4.4.4+1
  [a3f928ae] Fontconfig_jll v2.15.0+0
  [d7e528f0] FreeType2_jll v2.13.3+1
  [559328eb] FriBidi_jll v1.0.16+0
  [0656b61e] GLFW_jll v3.4.0+2
  [d2c73de3] GR_jll v0.73.13+0
  [78b55507] Gettext_jll v0.21.0+0
  [7746bdde] Glib_jll v2.82.4+0
  [3b182d85] Graphite2_jll v1.3.14+1
  [2e76f6c2] HarfBuzz_jll v8.5.0+0
  [1d5cc7b8] IntelOpenMP_jll v2025.0.4+0
  [aacddb02] JpegTurbo_jll v3.1.1+0
  [c1c5ebd0] LAME_jll v3.100.2+0
  [88015f11] LERC_jll v4.0.1+0
  [1d63c593] LLVMOpenMP_jll v18.1.7+0
  [dd4b983a] LZO_jll v2.10.3+0
⌅ [e9f186c6] Libffi_jll v3.2.2+2
  [d4300ac3] Libgcrypt_jll v1.11.0+0
  [7e76a0d4] Libglvnd_jll v1.7.0+0
  [7add5ba3] Libgpg_error_jll v1.51.1+0
  [94ce4f54] Libiconv_jll v1.18.0+0
  [4b2f31a3] Libmount_jll v2.40.3+0
  [89763e89] Libtiff_jll v4.7.1+0
  [38a345b3] Libuuid_jll v2.40.3+0
  [856f044c] MKL_jll v2025.0.1+1
  [e7412a2a] Ogg_jll v1.3.5+1
  [458c3c95] OpenSSL_jll v3.0.16+0
  [efe28fd5] OpenSpecFun_jll v0.5.6+0
  [91d4177d] Opus_jll v1.3.3+0
  [36c8627f] Pango_jll v1.56.1+0
⌅ [30392449] Pixman_jll v0.43.4+0
⌅ [c0090381] Qt6Base_jll v6.7.1+1
⌅ [629bc702] Qt6Declarative_jll v6.7.1+2
⌅ [ce943373] Qt6ShaderTools_jll v6.7.1+1
⌃ [e99dba38] Qt6Wayland_jll v6.7.1+1
  [f50d1b31] Rmath_jll v0.5.1+0
⌅ [fb77eaff] Sundials_jll v5.2.3+0
  [a44049a8] Vulkan_Loader_jll v1.3.243+0
  [a2964d1f] Wayland_jll v1.21.0+2
  [2381bf8a] Wayland_protocols_jll v1.36.0+0
  [02c8fc9c] XML2_jll v2.13.6+1
  [aed1982a] XSLT_jll v1.1.42+0
  [ffd25f8a] XZ_jll v5.6.4+1
  [f67eecfb] Xorg_libICE_jll v1.1.1+0
  [c834827a] Xorg_libSM_jll v1.2.4+0
  [4f6342f7] Xorg_libX11_jll v1.8.6+3
  [0c0b7dd1] Xorg_libXau_jll v1.0.12+0
  [935fb764] Xorg_libXcursor_jll v1.2.3+0
  [a3789734] Xorg_libXdmcp_jll v1.1.5+0
  [1082639a] Xorg_libXext_jll v1.3.6+3
  [d091e8ba] Xorg_libXfixes_jll v6.0.0+0
  [a51aa0fd] Xorg_libXi_jll v1.8.2+0
  [d1454406] Xorg_libXinerama_jll v1.1.5+0
  [ec84b674] Xorg_libXrandr_jll v1.5.4+0
  [ea2f1a96] Xorg_libXrender_jll v0.9.11+1
  [14d82f49] Xorg_libpthread_stubs_jll v0.1.2+0
  [c7cfdc94] Xorg_libxcb_jll v1.17.0+3
  [cc61e674] Xorg_libxkbfile_jll v1.1.2+1
  [e920d4aa] Xorg_xcb_util_cursor_jll v0.1.4+0
  [12413925] Xorg_xcb_util_image_jll v0.4.0+1
  [2def613f] Xorg_xcb_util_jll v0.4.0+1
  [975044d2] Xorg_xcb_util_keysyms_jll v0.4.0+1
  [0d47668e] Xorg_xcb_util_renderutil_jll v0.3.9+1
  [c22f9ab0] Xorg_xcb_util_wm_jll v0.4.1+1
  [35661453] Xorg_xkbcomp_jll v1.4.6+1
  [33bec58e] Xorg_xkeyboard_config_jll v2.39.0+0
  [c5fb5394] Xorg_xtrans_jll v1.5.1+0
  [3161d3a3] Zstd_jll v1.5.7+1
  [35ca27e7] eudev_jll v3.2.9+0
  [214eeab7] fzf_jll v0.56.3+0
  [1a1c6b14] gperf_jll v3.1.1+1
  [a4ae2306] libaom_jll v3.11.0+0
  [0ac62f75] libass_jll v0.15.2+0
  [1183f4f0] libdecor_jll v0.2.2+0
  [2db6ffa8] libevdev_jll v1.11.0+0
  [f638f0a6] libfdk_aac_jll v2.0.3+0
  [36db933b] libinput_jll v1.18.0+0
  [b53b4c65] libpng_jll v1.6.46+0
  [f27f6e37] libvorbis_jll v1.3.7+2
  [009596ad] mtdev_jll v1.1.6+0
  [1317d2d5] oneTBB_jll v2022.0.0+0
⌅ [1270edf5] x264_jll v2021.5.5+0
⌅ [dfaa095f] x265_jll v3.5.0+0
  [d8fb68d0] xkbcommon_jll v1.4.1+2
  [0dad84c5] ArgTools v1.1.2
  [56f22d72] Artifacts v1.11.0
  [2a0f44e3] Base64 v1.11.0
  [ade2ca70] Dates v1.11.0
  [8ba89e20] Distributed v1.11.0
  [f43a241f] Downloads v1.6.0
  [7b1f6079] FileWatching v1.11.0
  [9fa8497b] Future v1.11.0
  [b77e0a4c] InteractiveUtils v1.11.0
  [4af54fe1] LazyArtifacts v1.11.0
  [b27032c2] LibCURL v0.6.4
  [76f85450] LibGit2 v1.11.0
  [8f399da3] Libdl v1.11.0
  [37e2e46d] LinearAlgebra v1.11.0
  [56ddb016] Logging v1.11.0
  [d6f4376e] Markdown v1.11.0
  [a63ad114] Mmap v1.11.0
  [ca575930] NetworkOptions v1.2.0
  [44cfe95a] Pkg v1.11.0
  [de0858da] Printf v1.11.0
  [3fa0cd96] REPL v1.11.0
  [9a3f8284] Random v1.11.0
  [ea8e919c] SHA v0.7.0
  [9e88b42a] Serialization v1.11.0
  [1a1011a3] SharedArrays v1.11.0
  [6462fe0b] Sockets v1.11.0
  [2f01184e] SparseArrays v1.11.0
  [f489334b] StyledStrings v1.11.0
  [4607b0f0] SuiteSparse
  [fa267f1f] TOML v1.0.3
  [a4e569a6] Tar v1.10.0
  [8dfed614] Test v1.11.0
  [cf7118a7] UUIDs v1.11.0
  [4ec0a83e] Unicode v1.11.0
  [e66e0078] CompilerSupportLibraries_jll v1.1.1+0
  [deac9b47] LibCURL_jll v8.6.0+0
  [e37daf67] LibGit2_jll v1.7.2+0
  [29816b5a] LibSSH2_jll v1.11.0+1
  [c8ffd9c3] MbedTLS_jll v2.28.6+0
  [14a3606d] MozillaCACerts_jll v2023.12.12
  [4536629a] OpenBLAS_jll v0.3.27+1
  [05823500] OpenLibm_jll v0.8.1+2
  [efcefdf7] PCRE2_jll v10.42.0+1
  [bea87d4a] SuiteSparse_jll v7.7.0+0
  [83775a58] Zlib_jll v1.2.13+1
  [8e850b90] libblastrampoline_jll v5.11.0+0
  [8e850ede] nghttp2_jll v1.59.0+0
  [3f19e933] p7zip_jll v17.4.0+2
Info Packages marked with ⌃ and ⌅ have new versions available. Those with ⌃ may be upgradable, but those with ⌅ are restricted by compatibility constraints from upgrading. To see why use `status --outdated -m`

• Output of versioninfo()

Additional context

Add any other context about the problem here.