.gitignore

# Python venvs, IDE files, build artifacts
/local/
/plans/
/task.md
/experiments/
/global-fiber-sgd
**/.venv*/
**/.idea/*
**/__pycache__/
*.pyc
*.so
node_modules/.yarn-integrity
**/*.egg-info*/

# Vesuvius outputs & metadata
/vesuvius/outputs/
/vesuvius/sandbox/
/vesuvius/utils/tests/s5_test.zarr

*.DS_Store

# Defense in depth for google-github-actions/auth. Progress Prize workflows set
# create_credentials_file: false and must never produce these files.
gha-creds-*.json

**/checkpoints/

# WandB (allow general wandb)
!**/wandb/**

*.pth
segmentation/napari_trainer/cline_rules.md
segmentation/napari_trainer/test_1638_debug.png
/wandb
/vesuvius/external
/segmentation/vc_proofreader/wandb
vesuvius/src/vesuvius/AGENTS.md
vesuvius/AGENTS.md
/vesuvius/scratch
/volume-cartographer/scratch
/vesuvius/src/external

*.cover
/vesuvius/src/vesuvius/neural_tracing/tests/test_band_filtering

build/
volume-cartographer/AGENTS.md

# Coverage outputs
*.gcov
*.gcda
*.gcno
/volume-cartographer/coverage/
/coverage/

# ccache (mounted into builder docker)
/volume-cartographer/.ccache/
/.ccache/
/lasagna/snap_surf_objs
/spiral-fitting/bench
/volume-cartographer/scripts/cache
/volume-cartographer/docs/plans
/spiral-fitting/scratch
/spiral-fitting/out
/vesuvius/experiments
/vesuvius/src/vesuvius/neural_tracing/winding_models/runs
/spiral-fitting/plans
/volume-cartographer/scripts/spiral/out
/spiral-fitting/.claude
dinovol/cufile.log
/vesuvius/src/vesuvius/neural_tracing/tracers/fibers/datasets/automated_fiber_volumes
/vesuvius/src/vesuvius/neural_tracing/tracers/fibers/plans
/vesuvius/src/vesuvius/neural_tracing/tracers/sheets/output
/spiral-fitting/outputs/anchored_strip_extension
/spiral-fitting/outputs
/vesuvius/src/vesuvius/neural_tracing/fiber_follow/output

# Local Claude Code settings
**/.claude/settings.local.json
/vesuvius/src/vesuvius/neural_tracing/tracers/fibers/evaluation/audit
/volume-cartographer/plans
/spiral-fitting/experiments
/vc_object_store/docs/benchmarks
/vc_reader/benchmarks/results
*.csv
/vc_object_store/build-core
/vc_object_store/docs/benchmarks
/volume-cartographer/planning
/dinovol/dinovol_2/perf
/dinovol/evals/kaggle_surfaces/data
/dinovol/evals/kaggle_surfaces/runs
/dinovol/outputs
/dinovol/perf_results
/volume-cartographer/benchmarks/saved