From 909eefbb1da364f651f0c31e59f99a79456aa20f Mon Sep 17 00:00:00 2001 From: Brian Drawert Date: Thu, 23 Jan 2025 08:52:54 -0800 Subject: [PATCH] update copyright to 2025 --- gillespy2/__init__.py | 2 +- gillespy2/__version__.py | 2 +- gillespy2/core/__init__.py | 2 +- gillespy2/core/assignmentrule.py | 2 +- gillespy2/core/cleanup.py | 2 +- gillespy2/core/events.py | 2 +- gillespy2/core/functiondefinition.py | 2 +- gillespy2/core/gillespyError.py | 2 +- gillespy2/core/gillespySolver.py | 2 +- gillespy2/core/jsonify.py | 2 +- gillespy2/core/liveGraphing.py | 2 +- gillespy2/core/model.py | 2 +- gillespy2/core/parameter.py | 2 +- gillespy2/core/raterule.py | 2 +- gillespy2/core/reaction.py | 2 +- gillespy2/core/results.py | 2 +- gillespy2/core/sortableobject.py | 2 +- gillespy2/core/species.py | 2 +- gillespy2/core/timespan.py | 2 +- gillespy2/sbml/SBMLexport.py | 2 +- gillespy2/sbml/SBMLimport.py | 2 +- gillespy2/sbml/__init__.py | 2 +- gillespy2/solvers/__init__.py | 2 +- gillespy2/solvers/cpp/__init__.py | 2 +- gillespy2/solvers/cpp/build/SConstruct | 2 +- gillespy2/solvers/cpp/build/__init__.py | 2 +- gillespy2/solvers/cpp/build/build_engine.py | 2 +- gillespy2/solvers/cpp/build/expression.py | 2 +- gillespy2/solvers/cpp/build/make.py | 2 +- gillespy2/solvers/cpp/build/template_gen.py | 2 +- gillespy2/solvers/cpp/c_base/SConscript | 2 +- gillespy2/solvers/cpp/c_base/Sundials/SConscript | 2 +- gillespy2/solvers/cpp/c_base/Tau/SConscript | 2 +- gillespy2/solvers/cpp/c_base/Tau/tau.cpp | 2 +- gillespy2/solvers/cpp/c_base/Tau/tau.h | 2 +- gillespy2/solvers/cpp/c_base/arg_parser.cpp | 2 +- gillespy2/solvers/cpp/c_base/arg_parser.h | 2 +- gillespy2/solvers/cpp/c_base/model.cpp | 2 +- gillespy2/solvers/cpp/c_base/model.h | 2 +- gillespy2/solvers/cpp/c_base/ode_cpp_solver/ODESimulation.cpp | 2 +- gillespy2/solvers/cpp/c_base/ode_cpp_solver/ODESolver.cpp | 2 +- gillespy2/solvers/cpp/c_base/ode_cpp_solver/ODESolver.h | 2 +- gillespy2/solvers/cpp/c_base/ode_cpp_solver/SConscript | 2 +- gillespy2/solvers/cpp/c_base/ssa_cpp_solver/SConscript | 2 +- gillespy2/solvers/cpp/c_base/ssa_cpp_solver/SSASimulation.cpp | 2 +- gillespy2/solvers/cpp/c_base/ssa_cpp_solver/SSASolver.cpp | 2 +- gillespy2/solvers/cpp/c_base/ssa_cpp_solver/SSASolver.h | 2 +- .../solvers/cpp/c_base/tau_hybrid_cpp_solver/HybridModel.cpp | 2 +- .../solvers/cpp/c_base/tau_hybrid_cpp_solver/HybridModel.h | 2 +- gillespy2/solvers/cpp/c_base/tau_hybrid_cpp_solver/SConscript | 2 +- .../cpp/c_base/tau_hybrid_cpp_solver/TauHybridSimulation.cpp | 2 +- .../cpp/c_base/tau_hybrid_cpp_solver/TauHybridSolver.cpp | 2 +- .../solvers/cpp/c_base/tau_hybrid_cpp_solver/TauHybridSolver.h | 2 +- .../cpp/c_base/tau_hybrid_cpp_solver/hybrid_template.cpp | 2 +- .../solvers/cpp/c_base/tau_hybrid_cpp_solver/hybrid_template.h | 2 +- .../solvers/cpp/c_base/tau_hybrid_cpp_solver/integrator.cpp | 2 +- gillespy2/solvers/cpp/c_base/tau_hybrid_cpp_solver/integrator.h | 2 +- gillespy2/solvers/cpp/c_base/tau_leaping_cpp_solver/SConscript | 2 +- .../cpp/c_base/tau_leaping_cpp_solver/TauLeapingSimulation.cpp | 2 +- .../cpp/c_base/tau_leaping_cpp_solver/TauLeapingSolver.cpp | 2 +- .../cpp/c_base/tau_leaping_cpp_solver/TauLeapingSolver.h | 2 +- gillespy2/solvers/cpp/c_base/template/template.cpp | 2 +- gillespy2/solvers/cpp/c_base/template/template.h | 2 +- gillespy2/solvers/cpp/c_base/template/template_defaults.h | 2 +- gillespy2/solvers/cpp/c_base/template/template_definitions.h | 2 +- gillespy2/solvers/cpp/c_base/template/template_params.h | 2 +- gillespy2/solvers/cpp/c_decoder.py | 2 +- gillespy2/solvers/cpp/c_solver.py | 2 +- gillespy2/solvers/cpp/ode_c_solver.py | 2 +- gillespy2/solvers/cpp/ssa_c_solver.py | 2 +- gillespy2/solvers/cpp/tau_leaping_c_solver.py | 2 +- gillespy2/solvers/numpy/CLE_solver.py | 2 +- gillespy2/solvers/numpy/__init__.py | 2 +- gillespy2/solvers/numpy/ode_solver.py | 2 +- gillespy2/solvers/numpy/ssa_solver.py | 2 +- gillespy2/solvers/numpy/tau_hybrid_solver.py | 2 +- gillespy2/solvers/numpy/tau_leaping_solver.py | 2 +- gillespy2/solvers/utilities/Tau.py | 2 +- gillespy2/solvers/utilities/__init__.py | 2 +- gillespy2/solvers/utilities/cpp_support_test.py | 2 +- gillespy2/solvers/utilities/solverutils.py | 2 +- gillespy2/stochss/StochSSexport.py | 2 +- gillespy2/stochss/__init__.py | 2 +- 83 files changed, 83 insertions(+), 83 deletions(-) diff --git a/gillespy2/__init__.py b/gillespy2/__init__.py index f02dd71a..00c2348e 100644 --- a/gillespy2/__init__.py +++ b/gillespy2/__init__.py @@ -1,5 +1,5 @@ # GillesPy2 is a modeling toolkit for biochemical simulation. -# Copyright (C) 2019-2024 GillesPy2 developers. +# Copyright (C) 2019-2025 GillesPy2 developers. # This program is free software: you can redistribute it and/or modify # it under the terms of the GNU General Public License as published by diff --git a/gillespy2/__version__.py b/gillespy2/__version__.py index 18d024fa..ccd7ab92 100644 --- a/gillespy2/__version__.py +++ b/gillespy2/__version__.py @@ -1,5 +1,5 @@ # GillesPy2 is a modeling toolkit for biochemical simulation. -# Copyright (C) 2019-2024 GillesPy2 developers. +# Copyright (C) 2019-2025 GillesPy2 developers. # This program is free software: you can redistribute it and/or modify # it under the terms of the GNU General Public License as published by diff --git a/gillespy2/core/__init__.py b/gillespy2/core/__init__.py index b606a2c6..ac589871 100644 --- a/gillespy2/core/__init__.py +++ b/gillespy2/core/__init__.py @@ -1,5 +1,5 @@ # GillesPy2 is a modeling toolkit for biochemical simulation. -# Copyright (C) 2019-2024 GillesPy2 developers. +# Copyright (C) 2019-2025 GillesPy2 developers. # This program is free software: you can redistribute it and/or modify # it under the terms of the GNU General Public License as published by diff --git a/gillespy2/core/assignmentrule.py b/gillespy2/core/assignmentrule.py index 74b14706..41f9af6a 100644 --- a/gillespy2/core/assignmentrule.py +++ b/gillespy2/core/assignmentrule.py @@ -1,5 +1,5 @@ # GillesPy2 is a modeling toolkit for biochemical simulation. -# Copyright (C) 2019-2024 GillesPy2 developers. +# Copyright (C) 2019-2025 GillesPy2 developers. # This program is free software: you can redistribute it and/or modify # it under the terms of the GNU General Public License as published by diff --git a/gillespy2/core/cleanup.py b/gillespy2/core/cleanup.py index e3ab52c4..0a04888e 100644 --- a/gillespy2/core/cleanup.py +++ b/gillespy2/core/cleanup.py @@ -1,5 +1,5 @@ # GillesPy2 is a modeling toolkit for biochemical simulation. -# Copyright (C) 2019-2024 GillesPy2 developers. +# Copyright (C) 2019-2025 GillesPy2 developers. # This program is free software: you can redistribute it and/or modify # it under the terms of the GNU General Public License as published by diff --git a/gillespy2/core/events.py b/gillespy2/core/events.py index 065f0c0a..be3a8747 100644 --- a/gillespy2/core/events.py +++ b/gillespy2/core/events.py @@ -1,5 +1,5 @@ # GillesPy2 is a modeling toolkit for biochemical simulation. -# Copyright (C) 2019-2024 GillesPy2 developers. +# Copyright (C) 2019-2025 GillesPy2 developers. # This program is free software: you can redistribute it and/or modify # it under the terms of the GNU General Public License as published by diff --git a/gillespy2/core/functiondefinition.py b/gillespy2/core/functiondefinition.py index 3ee2024a..a6ae81df 100644 --- a/gillespy2/core/functiondefinition.py +++ b/gillespy2/core/functiondefinition.py @@ -1,5 +1,5 @@ # GillesPy2 is a modeling toolkit for biochemical simulation. -# Copyright (C) 2019-2024 GillesPy2 developers. +# Copyright (C) 2019-2025 GillesPy2 developers. # This program is free software: you can redistribute it and/or modify # it under the terms of the GNU General Public License as published by diff --git a/gillespy2/core/gillespyError.py b/gillespy2/core/gillespyError.py index 51414b29..13b909d4 100644 --- a/gillespy2/core/gillespyError.py +++ b/gillespy2/core/gillespyError.py @@ -1,5 +1,5 @@ # GillesPy2 is a modeling toolkit for biochemical simulation. -# Copyright (C) 2019-2024 GillesPy2 developers. +# Copyright (C) 2019-2025 GillesPy2 developers. # This program is free software: you can redistribute it and/or modify # it under the terms of the GNU General Public License as published by diff --git a/gillespy2/core/gillespySolver.py b/gillespy2/core/gillespySolver.py index db886e9c..80ed88ab 100644 --- a/gillespy2/core/gillespySolver.py +++ b/gillespy2/core/gillespySolver.py @@ -1,5 +1,5 @@ # GillesPy2 is a modeling toolkit for biochemical simulation. -# Copyright (C) 2019-2024 GillesPy2 developers. +# Copyright (C) 2019-2025 GillesPy2 developers. # This program is free software: you can redistribute it and/or modify # it under the terms of the GNU General Public License as published by diff --git a/gillespy2/core/jsonify.py b/gillespy2/core/jsonify.py index 5396c5a6..033b10a4 100644 --- a/gillespy2/core/jsonify.py +++ b/gillespy2/core/jsonify.py @@ -1,5 +1,5 @@ # GillesPy2 is a modeling toolkit for biochemical simulation. -# Copyright (C) 2019-2024 GillesPy2 developers. +# Copyright (C) 2019-2025 GillesPy2 developers. # This program is free software: you can redistribute it and/or modify # it under the terms of the GNU General Public License as published by diff --git a/gillespy2/core/liveGraphing.py b/gillespy2/core/liveGraphing.py index 96721d0b..923a819c 100644 --- a/gillespy2/core/liveGraphing.py +++ b/gillespy2/core/liveGraphing.py @@ -1,5 +1,5 @@ # GillesPy2 is a modeling toolkit for biochemical simulation. -# Copyright (C) 2019-2024 GillesPy2 developers. +# Copyright (C) 2019-2025 GillesPy2 developers. # This program is free software: you can redistribute it and/or modify # it under the terms of the GNU General Public License as published by diff --git a/gillespy2/core/model.py b/gillespy2/core/model.py index 1ff76dfb..ad44ca51 100644 --- a/gillespy2/core/model.py +++ b/gillespy2/core/model.py @@ -1,5 +1,5 @@ # GillesPy2 is a modeling toolkit for biochemical simulation. -# Copyright (C) 2019-2024 GillesPy2 developers. +# Copyright (C) 2019-2025 GillesPy2 developers. # This program is free software: you can redistribute it and/or modify # it under the terms of the GNU General Public License as published by diff --git a/gillespy2/core/parameter.py b/gillespy2/core/parameter.py index c1845e68..0cf0a937 100644 --- a/gillespy2/core/parameter.py +++ b/gillespy2/core/parameter.py @@ -1,5 +1,5 @@ # GillesPy2 is a modeling toolkit for biochemical simulation. -# Copyright (C) 2019-2024 GillesPy2 developers. +# Copyright (C) 2019-2025 GillesPy2 developers. # This program is free software: you can redistribute it and/or modify # it under the terms of the GNU General Public License as published by diff --git a/gillespy2/core/raterule.py b/gillespy2/core/raterule.py index 7bfa075a..94c5bea2 100644 --- a/gillespy2/core/raterule.py +++ b/gillespy2/core/raterule.py @@ -1,5 +1,5 @@ # GillesPy2 is a modeling toolkit for biochemical simulation. -# Copyright (C) 2019-2024 GillesPy2 developers. +# Copyright (C) 2019-2025 GillesPy2 developers. # This program is free software: you can redistribute it and/or modify # it under the terms of the GNU General Public License as published by diff --git a/gillespy2/core/reaction.py b/gillespy2/core/reaction.py index 6a8759e3..6c362c00 100644 --- a/gillespy2/core/reaction.py +++ b/gillespy2/core/reaction.py @@ -1,5 +1,5 @@ # GillesPy2 is a modeling toolkit for biochemical simulation. -# Copyright (C) 2019-2024 GillesPy2 developers. +# Copyright (C) 2019-2025 GillesPy2 developers. # This program is free software: you can redistribute it and/or modify # it under the terms of the GNU General Public License as published by diff --git a/gillespy2/core/results.py b/gillespy2/core/results.py index df3edd97..e6adaa7e 100644 --- a/gillespy2/core/results.py +++ b/gillespy2/core/results.py @@ -1,5 +1,5 @@ # GillesPy2 is a modeling toolkit for biochemical simulation. -# Copyright (C) 2019-2024 GillesPy2 developers. +# Copyright (C) 2019-2025 GillesPy2 developers. # This program is free software: you can redistribute it and/or modify # it under the terms of the GNU General Public License as published by diff --git a/gillespy2/core/sortableobject.py b/gillespy2/core/sortableobject.py index 28eb5357..2f58f767 100644 --- a/gillespy2/core/sortableobject.py +++ b/gillespy2/core/sortableobject.py @@ -1,5 +1,5 @@ # GillesPy2 is a modeling toolkit for biochemical simulation. -# Copyright (C) 2019-2024 GillesPy2 developers. +# Copyright (C) 2019-2025 GillesPy2 developers. # This program is free software: you can redistribute it and/or modify # it under the terms of the GNU General Public License as published by diff --git a/gillespy2/core/species.py b/gillespy2/core/species.py index 4429c0f5..e0979635 100644 --- a/gillespy2/core/species.py +++ b/gillespy2/core/species.py @@ -1,5 +1,5 @@ # GillesPy2 is a modeling toolkit for biochemical simulation. -# Copyright (C) 2019-2024 GillesPy2 developers. +# Copyright (C) 2019-2025 GillesPy2 developers. # This program is free software: you can redistribute it and/or modify # it under the terms of the GNU General Public License as published by diff --git a/gillespy2/core/timespan.py b/gillespy2/core/timespan.py index dda4d842..53fc19fa 100644 --- a/gillespy2/core/timespan.py +++ b/gillespy2/core/timespan.py @@ -1,5 +1,5 @@ # GillesPy2 is a modeling toolkit for biochemical simulation. -# Copyright (C) 2019-2024 GillesPy2 developers. +# Copyright (C) 2019-2025 GillesPy2 developers. # This program is free software: you can redistribute it and/or modify # it under the terms of the GNU General Public License as published by diff --git a/gillespy2/sbml/SBMLexport.py b/gillespy2/sbml/SBMLexport.py index 2d70da0c..a0aedcf5 100644 --- a/gillespy2/sbml/SBMLexport.py +++ b/gillespy2/sbml/SBMLexport.py @@ -1,5 +1,5 @@ # GillesPy2 is a modeling toolkit for biochemical simulation. -# Copyright (C) 2019-2024 GillesPy2 developers. +# Copyright (C) 2019-2025 GillesPy2 developers. # This program is free software: you can redistribute it and/or modify # it under the terms of the GNU General Public License as published by diff --git a/gillespy2/sbml/SBMLimport.py b/gillespy2/sbml/SBMLimport.py index 18bbf67b..43de0689 100644 --- a/gillespy2/sbml/SBMLimport.py +++ b/gillespy2/sbml/SBMLimport.py @@ -1,5 +1,5 @@ # GillesPy2 is a modeling toolkit for biochemical simulation. -# Copyright (C) 2019-2024 GillesPy2 developers. +# Copyright (C) 2019-2025 GillesPy2 developers. # This program is free software: you can redistribute it and/or modify # it under the terms of the GNU General Public License as published by diff --git a/gillespy2/sbml/__init__.py b/gillespy2/sbml/__init__.py index 4c14cfe3..eb672d82 100644 --- a/gillespy2/sbml/__init__.py +++ b/gillespy2/sbml/__init__.py @@ -1,5 +1,5 @@ # GillesPy2 is a modeling toolkit for biochemical simulation. -# Copyright (C) 2019-2024 GillesPy2 developers. +# Copyright (C) 2019-2025 GillesPy2 developers. # This program is free software: you can redistribute it and/or modify # it under the terms of the GNU General Public License as published by diff --git a/gillespy2/solvers/__init__.py b/gillespy2/solvers/__init__.py index 4deae4bf..e4cf4748 100644 --- a/gillespy2/solvers/__init__.py +++ b/gillespy2/solvers/__init__.py @@ -1,5 +1,5 @@ # GillesPy2 is a modeling toolkit for biochemical simulation. -# Copyright (C) 2019-2024 GillesPy2 developers. +# Copyright (C) 2019-2025 GillesPy2 developers. # This program is free software: you can redistribute it and/or modify # it under the terms of the GNU General Public License as published by diff --git a/gillespy2/solvers/cpp/__init__.py b/gillespy2/solvers/cpp/__init__.py index dadbd8c4..26ce11b2 100644 --- a/gillespy2/solvers/cpp/__init__.py +++ b/gillespy2/solvers/cpp/__init__.py @@ -1,5 +1,5 @@ # GillesPy2 is a modeling toolkit for biochemical simulation. -# Copyright (C) 2019-2024 GillesPy2 developers. +# Copyright (C) 2019-2025 GillesPy2 developers. # This program is free software: you can redistribute it and/or modify # it under the terms of the GNU General Public License as published by diff --git a/gillespy2/solvers/cpp/build/SConstruct b/gillespy2/solvers/cpp/build/SConstruct index f5b4eb65..c1d77f8c 100644 --- a/gillespy2/solvers/cpp/build/SConstruct +++ b/gillespy2/solvers/cpp/build/SConstruct @@ -1,5 +1,5 @@ # GillesPy2 is a modeling toolkit for biochemical simulation. -# Copyright (C) 2019-2024 GillesPy2 developers. +# Copyright (C) 2019-2025 GillesPy2 developers. # This program is free software: you can redistribute it and/or modify # it under the terms of the GNU General Public License as published by diff --git a/gillespy2/solvers/cpp/build/__init__.py b/gillespy2/solvers/cpp/build/__init__.py index 4c14cfe3..eb672d82 100644 --- a/gillespy2/solvers/cpp/build/__init__.py +++ b/gillespy2/solvers/cpp/build/__init__.py @@ -1,5 +1,5 @@ # GillesPy2 is a modeling toolkit for biochemical simulation. -# Copyright (C) 2019-2024 GillesPy2 developers. +# Copyright (C) 2019-2025 GillesPy2 developers. # This program is free software: you can redistribute it and/or modify # it under the terms of the GNU General Public License as published by diff --git a/gillespy2/solvers/cpp/build/build_engine.py b/gillespy2/solvers/cpp/build/build_engine.py index fc698ee4..30aed6af 100644 --- a/gillespy2/solvers/cpp/build/build_engine.py +++ b/gillespy2/solvers/cpp/build/build_engine.py @@ -1,5 +1,5 @@ # GillesPy2 is a modeling toolkit for biochemical simulation. -# Copyright (C) 2019-2024 GillesPy2 developers. +# Copyright (C) 2019-2025 GillesPy2 developers. # This program is free software: you can redistribute it and/or modify # it under the terms of the GNU General Public License as published by diff --git a/gillespy2/solvers/cpp/build/expression.py b/gillespy2/solvers/cpp/build/expression.py index b3d3be2f..35644643 100644 --- a/gillespy2/solvers/cpp/build/expression.py +++ b/gillespy2/solvers/cpp/build/expression.py @@ -1,5 +1,5 @@ # GillesPy2 is a modeling toolkit for biochemical simulation. -# Copyright (C) 2019-2024 GillesPy2 developers. +# Copyright (C) 2019-2025 GillesPy2 developers. # This program is free software: you can redistribute it and/or modify # it under the terms of the GNU General Public License as published by diff --git a/gillespy2/solvers/cpp/build/make.py b/gillespy2/solvers/cpp/build/make.py index 1a24bbbf..2d22a2fd 100644 --- a/gillespy2/solvers/cpp/build/make.py +++ b/gillespy2/solvers/cpp/build/make.py @@ -1,5 +1,5 @@ # GillesPy2 is a modeling toolkit for biochemical simulation. -# Copyright (C) 2019-2024 GillesPy2 developers. +# Copyright (C) 2019-2025 GillesPy2 developers. # This program is free software: you can redistribute it and/or modify # it under the terms of the GNU General Public License as published by diff --git a/gillespy2/solvers/cpp/build/template_gen.py b/gillespy2/solvers/cpp/build/template_gen.py index 6529527e..9421e97d 100644 --- a/gillespy2/solvers/cpp/build/template_gen.py +++ b/gillespy2/solvers/cpp/build/template_gen.py @@ -1,5 +1,5 @@ # GillesPy2 is a modeling toolkit for biochemical simulation. -# Copyright (C) 2019-2024 GillesPy2 developers. +# Copyright (C) 2019-2025 GillesPy2 developers. # This program is free software: you can redistribute it and/or modify # it under the terms of the GNU General Public License as published by diff --git a/gillespy2/solvers/cpp/c_base/SConscript b/gillespy2/solvers/cpp/c_base/SConscript index cbce2a55..c1bd0362 100644 --- a/gillespy2/solvers/cpp/c_base/SConscript +++ b/gillespy2/solvers/cpp/c_base/SConscript @@ -1,5 +1,5 @@ # GillesPy2 is a modeling toolkit for biochemical simulation. -# Copyright (C) 2019-2024 GillesPy2 developers. +# Copyright (C) 2019-2025 GillesPy2 developers. # This program is free software: you can redistribute it and/or modify # it under the terms of the GNU General Public License as published by diff --git a/gillespy2/solvers/cpp/c_base/Sundials/SConscript b/gillespy2/solvers/cpp/c_base/Sundials/SConscript index a291772f..b2e4cf3f 100644 --- a/gillespy2/solvers/cpp/c_base/Sundials/SConscript +++ b/gillespy2/solvers/cpp/c_base/Sundials/SConscript @@ -1,5 +1,5 @@ # GillesPy2 is a modeling toolkit for biochemical simulation. -# Copyright (C) 2019-2024 GillesPy2 developers. +# Copyright (C) 2019-2025 GillesPy2 developers. # This program is free software: you can redistribute it and/or modify # it under the terms of the GNU General Public License as published by diff --git a/gillespy2/solvers/cpp/c_base/Tau/SConscript b/gillespy2/solvers/cpp/c_base/Tau/SConscript index 3c38ee3a..8f90873b 100644 --- a/gillespy2/solvers/cpp/c_base/Tau/SConscript +++ b/gillespy2/solvers/cpp/c_base/Tau/SConscript @@ -1,5 +1,5 @@ # GillesPy2 is a modeling toolkit for biochemical simulation. -# Copyright (C) 2019-2024 GillesPy2 developers. +# Copyright (C) 2019-2025 GillesPy2 developers. # This program is free software: you can redistribute it and/or modify # it under the terms of the GNU General Public License as published by diff --git a/gillespy2/solvers/cpp/c_base/Tau/tau.cpp b/gillespy2/solvers/cpp/c_base/Tau/tau.cpp index fbdfd041..7038cba5 100644 --- a/gillespy2/solvers/cpp/c_base/Tau/tau.cpp +++ b/gillespy2/solvers/cpp/c_base/Tau/tau.cpp @@ -1,6 +1,6 @@ /* * GillesPy2 is a modeling toolkit for biochemical simulation. - * Copyright (C) 2019-2024 GillesPy2 developers. + * Copyright (C) 2019-2025 GillesPy2 developers. * * This program is free software: you can redistribute it and/or modify * it under the terms of the GNU General Public License as published by diff --git a/gillespy2/solvers/cpp/c_base/Tau/tau.h b/gillespy2/solvers/cpp/c_base/Tau/tau.h index 8b32f82b..223bc2ae 100644 --- a/gillespy2/solvers/cpp/c_base/Tau/tau.h +++ b/gillespy2/solvers/cpp/c_base/Tau/tau.h @@ -1,6 +1,6 @@ /* * GillesPy2 is a modeling toolkit for biochemical simulation. - * Copyright (C) 2019-2024 GillesPy2 developers. + * Copyright (C) 2019-2025 GillesPy2 developers. * * This program is free software: you can redistribute it and/or modify * it under the terms of the GNU General Public License as published by diff --git a/gillespy2/solvers/cpp/c_base/arg_parser.cpp b/gillespy2/solvers/cpp/c_base/arg_parser.cpp index 2244b243..c4872296 100644 --- a/gillespy2/solvers/cpp/c_base/arg_parser.cpp +++ b/gillespy2/solvers/cpp/c_base/arg_parser.cpp @@ -1,6 +1,6 @@ /* * GillesPy2 is a modeling toolkit for biochemical simulation. - * Copyright (C) 2019-2024 GillesPy2 developers. + * Copyright (C) 2019-2025 GillesPy2 developers. * * This program is free software: you can redistribute it and/or modify * it under the terms of the GNU General Public License as published by diff --git a/gillespy2/solvers/cpp/c_base/arg_parser.h b/gillespy2/solvers/cpp/c_base/arg_parser.h index 1a545119..8e212fbb 100644 --- a/gillespy2/solvers/cpp/c_base/arg_parser.h +++ b/gillespy2/solvers/cpp/c_base/arg_parser.h @@ -1,6 +1,6 @@ /* * GillesPy2 is a modeling toolkit for biochemical simulation. - * Copyright (C) 2019-2024 GillesPy2 developers. + * Copyright (C) 2019-2025 GillesPy2 developers. * * This program is free software: you can redistribute it and/or modify * it under the terms of the GNU General Public License as published by diff --git a/gillespy2/solvers/cpp/c_base/model.cpp b/gillespy2/solvers/cpp/c_base/model.cpp index 2d338688..66219dff 100644 --- a/gillespy2/solvers/cpp/c_base/model.cpp +++ b/gillespy2/solvers/cpp/c_base/model.cpp @@ -1,6 +1,6 @@ /* * GillesPy2 is a modeling toolkit for biochemical simulation. - * Copyright (C) 2019-2024 GillesPy2 developers. + * Copyright (C) 2019-2025 GillesPy2 developers. * * This program is free software: you can redistribute it and/or modify * it under the terms of the GNU General Public License as published by diff --git a/gillespy2/solvers/cpp/c_base/model.h b/gillespy2/solvers/cpp/c_base/model.h index 91a813cd..8403f88e 100644 --- a/gillespy2/solvers/cpp/c_base/model.h +++ b/gillespy2/solvers/cpp/c_base/model.h @@ -1,6 +1,6 @@ /* * GillesPy2 is a modeling toolkit for biochemical simulation. - * Copyright (C) 2019-2024 GillesPy2 developers. + * Copyright (C) 2019-2025 GillesPy2 developers. * * This program is free software: you can redistribute it and/or modify * it under the terms of the GNU General Public License as published by diff --git a/gillespy2/solvers/cpp/c_base/ode_cpp_solver/ODESimulation.cpp b/gillespy2/solvers/cpp/c_base/ode_cpp_solver/ODESimulation.cpp index 2c5b16ef..f7f42d1a 100644 --- a/gillespy2/solvers/cpp/c_base/ode_cpp_solver/ODESimulation.cpp +++ b/gillespy2/solvers/cpp/c_base/ode_cpp_solver/ODESimulation.cpp @@ -1,6 +1,6 @@ /* * GillesPy2 is a modeling toolkit for biochemical simulation. - * Copyright (C) 2019-2024 GillesPy2 developers. + * Copyright (C) 2019-2025 GillesPy2 developers. * * This program is free software: you can redistribute it and/or modify * it under the terms of the GNU General Public License as published by diff --git a/gillespy2/solvers/cpp/c_base/ode_cpp_solver/ODESolver.cpp b/gillespy2/solvers/cpp/c_base/ode_cpp_solver/ODESolver.cpp index 6685c91d..66859501 100644 --- a/gillespy2/solvers/cpp/c_base/ode_cpp_solver/ODESolver.cpp +++ b/gillespy2/solvers/cpp/c_base/ode_cpp_solver/ODESolver.cpp @@ -1,6 +1,6 @@ /* * GillesPy2 is a modeling toolkit for biochemical simulation. - * Copyright (C) 2019-2024 GillesPy2 developers. + * Copyright (C) 2019-2025 GillesPy2 developers. * * This program is free software: you can redistribute it and/or modify * it under the terms of the GNU General Public License as published by diff --git a/gillespy2/solvers/cpp/c_base/ode_cpp_solver/ODESolver.h b/gillespy2/solvers/cpp/c_base/ode_cpp_solver/ODESolver.h index d7547f62..5bfab6dc 100644 --- a/gillespy2/solvers/cpp/c_base/ode_cpp_solver/ODESolver.h +++ b/gillespy2/solvers/cpp/c_base/ode_cpp_solver/ODESolver.h @@ -1,6 +1,6 @@ /* * GillesPy2 is a modeling toolkit for biochemical simulation. - * Copyright (C) 2019-2024 GillesPy2 developers. + * Copyright (C) 2019-2025 GillesPy2 developers. * * This program is free software: you can redistribute it and/or modify * it under the terms of the GNU General Public License as published by diff --git a/gillespy2/solvers/cpp/c_base/ode_cpp_solver/SConscript b/gillespy2/solvers/cpp/c_base/ode_cpp_solver/SConscript index a7259378..2ebb0a2f 100644 --- a/gillespy2/solvers/cpp/c_base/ode_cpp_solver/SConscript +++ b/gillespy2/solvers/cpp/c_base/ode_cpp_solver/SConscript @@ -1,5 +1,5 @@ # GillesPy2 is a modeling toolkit for biochemical simulation. -# Copyright (C) 2019-2024 GillesPy2 developers. +# Copyright (C) 2019-2025 GillesPy2 developers. # This program is free software: you can redistribute it and/or modify # it under the terms of the GNU General Public License as published by diff --git a/gillespy2/solvers/cpp/c_base/ssa_cpp_solver/SConscript b/gillespy2/solvers/cpp/c_base/ssa_cpp_solver/SConscript index 5f5f25c7..bfffba20 100644 --- a/gillespy2/solvers/cpp/c_base/ssa_cpp_solver/SConscript +++ b/gillespy2/solvers/cpp/c_base/ssa_cpp_solver/SConscript @@ -1,5 +1,5 @@ # GillesPy2 is a modeling toolkit for biochemical simulation. -# Copyright (C) 2019-2024 GillesPy2 developers. +# Copyright (C) 2019-2025 GillesPy2 developers. # This program is free software: you can redistribute it and/or modify # it under the terms of the GNU General Public License as published by diff --git a/gillespy2/solvers/cpp/c_base/ssa_cpp_solver/SSASimulation.cpp b/gillespy2/solvers/cpp/c_base/ssa_cpp_solver/SSASimulation.cpp index 2dcc68e8..25383e74 100644 --- a/gillespy2/solvers/cpp/c_base/ssa_cpp_solver/SSASimulation.cpp +++ b/gillespy2/solvers/cpp/c_base/ssa_cpp_solver/SSASimulation.cpp @@ -1,6 +1,6 @@ /* * GillesPy2 is a modeling toolkit for biochemical simulation. - * Copyright (C) 2019-2024 GillesPy2 developers. + * Copyright (C) 2019-2025 GillesPy2 developers. * * This program is free software: you can redistribute it and/or modify * it under the terms of the GNU General Public License as published by diff --git a/gillespy2/solvers/cpp/c_base/ssa_cpp_solver/SSASolver.cpp b/gillespy2/solvers/cpp/c_base/ssa_cpp_solver/SSASolver.cpp index dba16464..1ae94f86 100644 --- a/gillespy2/solvers/cpp/c_base/ssa_cpp_solver/SSASolver.cpp +++ b/gillespy2/solvers/cpp/c_base/ssa_cpp_solver/SSASolver.cpp @@ -1,6 +1,6 @@ /* * GillesPy2 is a modeling toolkit for biochemical simulation. - * Copyright (C) 2019-2024 GillesPy2 developers. + * Copyright (C) 2019-2025 GillesPy2 developers. * * This program is free software: you can redistribute it and/or modify * it under the terms of the GNU General Public License as published by diff --git a/gillespy2/solvers/cpp/c_base/ssa_cpp_solver/SSASolver.h b/gillespy2/solvers/cpp/c_base/ssa_cpp_solver/SSASolver.h index 43d8d980..5b9da863 100644 --- a/gillespy2/solvers/cpp/c_base/ssa_cpp_solver/SSASolver.h +++ b/gillespy2/solvers/cpp/c_base/ssa_cpp_solver/SSASolver.h @@ -1,6 +1,6 @@ /* * GillesPy2 is a modeling toolkit for biochemical simulation. - * Copyright (C) 2019-2024 GillesPy2 developers. + * Copyright (C) 2019-2025 GillesPy2 developers. * * This program is free software: you can redistribute it and/or modify * it under the terms of the GNU General Public License as published by diff --git a/gillespy2/solvers/cpp/c_base/tau_hybrid_cpp_solver/HybridModel.cpp b/gillespy2/solvers/cpp/c_base/tau_hybrid_cpp_solver/HybridModel.cpp index eb791c57..a565ff74 100644 --- a/gillespy2/solvers/cpp/c_base/tau_hybrid_cpp_solver/HybridModel.cpp +++ b/gillespy2/solvers/cpp/c_base/tau_hybrid_cpp_solver/HybridModel.cpp @@ -1,6 +1,6 @@ /* * GillesPy2 is a modeling toolkit for biochemical simulation. - * Copyright (C) 2019-2024 GillesPy2 developers. + * Copyright (C) 2019-2025 GillesPy2 developers. * * This program is free software: you can redistribute it and/or modify * it under the terms of the GNU General Public License as published by diff --git a/gillespy2/solvers/cpp/c_base/tau_hybrid_cpp_solver/HybridModel.h b/gillespy2/solvers/cpp/c_base/tau_hybrid_cpp_solver/HybridModel.h index 2cc760d1..834df4c9 100644 --- a/gillespy2/solvers/cpp/c_base/tau_hybrid_cpp_solver/HybridModel.h +++ b/gillespy2/solvers/cpp/c_base/tau_hybrid_cpp_solver/HybridModel.h @@ -1,6 +1,6 @@ /* * GillesPy2 is a modeling toolkit for biochemical simulation. - * Copyright (C) 2019-2024 GillesPy2 developers. + * Copyright (C) 2019-2025 GillesPy2 developers. * * This program is free software: you can redistribute it and/or modify * it under the terms of the GNU General Public License as published by diff --git a/gillespy2/solvers/cpp/c_base/tau_hybrid_cpp_solver/SConscript b/gillespy2/solvers/cpp/c_base/tau_hybrid_cpp_solver/SConscript index 3897e9c3..d4ffc96d 100644 --- a/gillespy2/solvers/cpp/c_base/tau_hybrid_cpp_solver/SConscript +++ b/gillespy2/solvers/cpp/c_base/tau_hybrid_cpp_solver/SConscript @@ -1,5 +1,5 @@ # GillesPy2 is a modeling toolkit for biochemical simulation. -# Copyright (C) 2019-2024 GillesPy2 developers. +# Copyright (C) 2019-2025 GillesPy2 developers. # This program is free software: you can redistribute it and/or modify # it under the terms of the GNU General Public License as published by diff --git a/gillespy2/solvers/cpp/c_base/tau_hybrid_cpp_solver/TauHybridSimulation.cpp b/gillespy2/solvers/cpp/c_base/tau_hybrid_cpp_solver/TauHybridSimulation.cpp index 16a1e992..c3fd9f20 100644 --- a/gillespy2/solvers/cpp/c_base/tau_hybrid_cpp_solver/TauHybridSimulation.cpp +++ b/gillespy2/solvers/cpp/c_base/tau_hybrid_cpp_solver/TauHybridSimulation.cpp @@ -1,6 +1,6 @@ /* * GillesPy2 is a modeling toolkit for biochemical simulation. - * Copyright (C) 2019-2024 GillesPy2 developers. + * Copyright (C) 2019-2025 GillesPy2 developers. * * This program is free software: you can redistribute it and/or modify * it under the terms of the GNU General Public License as published by diff --git a/gillespy2/solvers/cpp/c_base/tau_hybrid_cpp_solver/TauHybridSolver.cpp b/gillespy2/solvers/cpp/c_base/tau_hybrid_cpp_solver/TauHybridSolver.cpp index e2e28725..04cd2256 100644 --- a/gillespy2/solvers/cpp/c_base/tau_hybrid_cpp_solver/TauHybridSolver.cpp +++ b/gillespy2/solvers/cpp/c_base/tau_hybrid_cpp_solver/TauHybridSolver.cpp @@ -1,6 +1,6 @@ /* * GillesPy2 is a modeling toolkit for biochemical simulation. - * Copyright (C) 2019-2024 GillesPy2 developers. + * Copyright (C) 2019-2025 GillesPy2 developers. * * This program is free software: you can redistribute it and/or modify * it under the terms of the GNU General Public License as published by diff --git a/gillespy2/solvers/cpp/c_base/tau_hybrid_cpp_solver/TauHybridSolver.h b/gillespy2/solvers/cpp/c_base/tau_hybrid_cpp_solver/TauHybridSolver.h index f4f1dc91..623f0e7e 100644 --- a/gillespy2/solvers/cpp/c_base/tau_hybrid_cpp_solver/TauHybridSolver.h +++ b/gillespy2/solvers/cpp/c_base/tau_hybrid_cpp_solver/TauHybridSolver.h @@ -1,6 +1,6 @@ /* * GillesPy2 is a modeling toolkit for biochemical simulation. - * Copyright (C) 2019-2024 GillesPy2 developers. + * Copyright (C) 2019-2025 GillesPy2 developers. * * This program is free software: you can redistribute it and/or modify * it under the terms of the GNU General Public License as published by diff --git a/gillespy2/solvers/cpp/c_base/tau_hybrid_cpp_solver/hybrid_template.cpp b/gillespy2/solvers/cpp/c_base/tau_hybrid_cpp_solver/hybrid_template.cpp index 0ab0e254..bab13fd1 100644 --- a/gillespy2/solvers/cpp/c_base/tau_hybrid_cpp_solver/hybrid_template.cpp +++ b/gillespy2/solvers/cpp/c_base/tau_hybrid_cpp_solver/hybrid_template.cpp @@ -1,6 +1,6 @@ /* * GillesPy2 is a modeling toolkit for biochemical simulation. - * Copyright (C) 2019-2024 GillesPy2 developers. + * Copyright (C) 2019-2025 GillesPy2 developers. * * This program is free software: you can redistribute it and/or modify * it under the terms of the GNU General Public License as published by diff --git a/gillespy2/solvers/cpp/c_base/tau_hybrid_cpp_solver/hybrid_template.h b/gillespy2/solvers/cpp/c_base/tau_hybrid_cpp_solver/hybrid_template.h index 9e35be05..5aee4280 100644 --- a/gillespy2/solvers/cpp/c_base/tau_hybrid_cpp_solver/hybrid_template.h +++ b/gillespy2/solvers/cpp/c_base/tau_hybrid_cpp_solver/hybrid_template.h @@ -1,6 +1,6 @@ /* * GillesPy2 is a modeling toolkit for biochemical simulation. - * Copyright (C) 2019-2024 GillesPy2 developers. + * Copyright (C) 2019-2025 GillesPy2 developers. * * This program is free software: you can redistribute it and/or modify * it under the terms of the GNU General Public License as published by diff --git a/gillespy2/solvers/cpp/c_base/tau_hybrid_cpp_solver/integrator.cpp b/gillespy2/solvers/cpp/c_base/tau_hybrid_cpp_solver/integrator.cpp index c3d636ca..17e8b243 100644 --- a/gillespy2/solvers/cpp/c_base/tau_hybrid_cpp_solver/integrator.cpp +++ b/gillespy2/solvers/cpp/c_base/tau_hybrid_cpp_solver/integrator.cpp @@ -1,6 +1,6 @@ /* * GillesPy2 is a modeling toolkit for biochemical simulation. - * Copyright (C) 2019-2024 GillesPy2 developers. + * Copyright (C) 2019-2025 GillesPy2 developers. * * This program is free software: you can redistribute it and/or modify * it under the terms of the GNU General Public License as published by diff --git a/gillespy2/solvers/cpp/c_base/tau_hybrid_cpp_solver/integrator.h b/gillespy2/solvers/cpp/c_base/tau_hybrid_cpp_solver/integrator.h index 5f8f7708..17754940 100644 --- a/gillespy2/solvers/cpp/c_base/tau_hybrid_cpp_solver/integrator.h +++ b/gillespy2/solvers/cpp/c_base/tau_hybrid_cpp_solver/integrator.h @@ -1,6 +1,6 @@ /* * GillesPy2 is a modeling toolkit for biochemical simulation. - * Copyright (C) 2019-2024 GillesPy2 developers. + * Copyright (C) 2019-2025 GillesPy2 developers. * * This program is free software: you can redistribute it and/or modify * it under the terms of the GNU General Public License as published by diff --git a/gillespy2/solvers/cpp/c_base/tau_leaping_cpp_solver/SConscript b/gillespy2/solvers/cpp/c_base/tau_leaping_cpp_solver/SConscript index d5927de9..9ec2fecc 100644 --- a/gillespy2/solvers/cpp/c_base/tau_leaping_cpp_solver/SConscript +++ b/gillespy2/solvers/cpp/c_base/tau_leaping_cpp_solver/SConscript @@ -1,5 +1,5 @@ # GillesPy2 is a modeling toolkit for biochemical simulation. -# Copyright (C) 2019-2024 GillesPy2 developers. +# Copyright (C) 2019-2025 GillesPy2 developers. # This program is free software: you can redistribute it and/or modify # it under the terms of the GNU General Public License as published by diff --git a/gillespy2/solvers/cpp/c_base/tau_leaping_cpp_solver/TauLeapingSimulation.cpp b/gillespy2/solvers/cpp/c_base/tau_leaping_cpp_solver/TauLeapingSimulation.cpp index 741c522b..9d602049 100644 --- a/gillespy2/solvers/cpp/c_base/tau_leaping_cpp_solver/TauLeapingSimulation.cpp +++ b/gillespy2/solvers/cpp/c_base/tau_leaping_cpp_solver/TauLeapingSimulation.cpp @@ -1,6 +1,6 @@ /* * GillesPy2 is a modeling toolkit for biochemical simulation. - * Copyright (C) 2019-2024 GillesPy2 developers. + * Copyright (C) 2019-2025 GillesPy2 developers. * * This program is free software: you can redistribute it and/or modify * it under the terms of the GNU General Public License as published by diff --git a/gillespy2/solvers/cpp/c_base/tau_leaping_cpp_solver/TauLeapingSolver.cpp b/gillespy2/solvers/cpp/c_base/tau_leaping_cpp_solver/TauLeapingSolver.cpp index be06e153..c8760324 100644 --- a/gillespy2/solvers/cpp/c_base/tau_leaping_cpp_solver/TauLeapingSolver.cpp +++ b/gillespy2/solvers/cpp/c_base/tau_leaping_cpp_solver/TauLeapingSolver.cpp @@ -1,6 +1,6 @@ /* * GillesPy2 is a modeling toolkit for biochemical simulation. - * Copyright (C) 2019-2024 GillesPy2 developers. + * Copyright (C) 2019-2025 GillesPy2 developers. * * This program is free software: you can redistribute it and/or modify * it under the terms of the GNU General Public License as published by diff --git a/gillespy2/solvers/cpp/c_base/tau_leaping_cpp_solver/TauLeapingSolver.h b/gillespy2/solvers/cpp/c_base/tau_leaping_cpp_solver/TauLeapingSolver.h index b7ae1330..85024edb 100644 --- a/gillespy2/solvers/cpp/c_base/tau_leaping_cpp_solver/TauLeapingSolver.h +++ b/gillespy2/solvers/cpp/c_base/tau_leaping_cpp_solver/TauLeapingSolver.h @@ -1,6 +1,6 @@ /* * GillesPy2 is a modeling toolkit for biochemical simulation. - * Copyright (C) 2019-2024 GillesPy2 developers. + * Copyright (C) 2019-2025 GillesPy2 developers. * * This program is free software: you can redistribute it and/or modify * it under the terms of the GNU General Public License as published by diff --git a/gillespy2/solvers/cpp/c_base/template/template.cpp b/gillespy2/solvers/cpp/c_base/template/template.cpp index 4586d550..3f8b976d 100644 --- a/gillespy2/solvers/cpp/c_base/template/template.cpp +++ b/gillespy2/solvers/cpp/c_base/template/template.cpp @@ -1,6 +1,6 @@ /* * GillesPy2 is a modeling toolkit for biochemical simulation. - * Copyright (C) 2019-2024 GillesPy2 developers. + * Copyright (C) 2019-2025 GillesPy2 developers. * * This program is free software: you can redistribute it and/or modify * it under the terms of the GNU General Public License as published by diff --git a/gillespy2/solvers/cpp/c_base/template/template.h b/gillespy2/solvers/cpp/c_base/template/template.h index 3cc60945..5304faee 100644 --- a/gillespy2/solvers/cpp/c_base/template/template.h +++ b/gillespy2/solvers/cpp/c_base/template/template.h @@ -1,6 +1,6 @@ /* * GillesPy2 is a modeling toolkit for biochemical simulation. - * Copyright (C) 2019-2024 GillesPy2 developers. + * Copyright (C) 2019-2025 GillesPy2 developers. * * This program is free software: you can redistribute it and/or modify * it under the terms of the GNU General Public License as published by diff --git a/gillespy2/solvers/cpp/c_base/template/template_defaults.h b/gillespy2/solvers/cpp/c_base/template/template_defaults.h index 7ac4d51f..64688dd6 100644 --- a/gillespy2/solvers/cpp/c_base/template/template_defaults.h +++ b/gillespy2/solvers/cpp/c_base/template/template_defaults.h @@ -1,6 +1,6 @@ /* * GillesPy2 is a modeling toolkit for biochemical simulation. - * Copyright (C) 2019-2024 GillesPy2 developers. + * Copyright (C) 2019-2025 GillesPy2 developers. * * This program is free software: you can redistribute it and/or modify * it under the terms of the GNU General Public License as published by diff --git a/gillespy2/solvers/cpp/c_base/template/template_definitions.h b/gillespy2/solvers/cpp/c_base/template/template_definitions.h index fc042ec3..450142a4 100644 --- a/gillespy2/solvers/cpp/c_base/template/template_definitions.h +++ b/gillespy2/solvers/cpp/c_base/template/template_definitions.h @@ -1,6 +1,6 @@ /* * GillesPy2 is a modeling toolkit for biochemical simulation. - * Copyright (C) 2019-2024 GillesPy2 developers. + * Copyright (C) 2019-2025 GillesPy2 developers. * * This program is free software: you can redistribute it and/or modify * it under the terms of the GNU General Public License as published by diff --git a/gillespy2/solvers/cpp/c_base/template/template_params.h b/gillespy2/solvers/cpp/c_base/template/template_params.h index 854b3fd2..bba097d9 100644 --- a/gillespy2/solvers/cpp/c_base/template/template_params.h +++ b/gillespy2/solvers/cpp/c_base/template/template_params.h @@ -1,6 +1,6 @@ /* * GillesPy2 is a modeling toolkit for biochemical simulation. - * Copyright (C) 2019-2024 GillesPy2 developers. + * Copyright (C) 2019-2025 GillesPy2 developers. * * This program is free software: you can redistribute it and/or modify * it under the terms of the GNU General Public License as published by diff --git a/gillespy2/solvers/cpp/c_decoder.py b/gillespy2/solvers/cpp/c_decoder.py index d5e7856c..687f08c9 100644 --- a/gillespy2/solvers/cpp/c_decoder.py +++ b/gillespy2/solvers/cpp/c_decoder.py @@ -1,5 +1,5 @@ # GillesPy2 is a modeling toolkit for biochemical simulation. -# Copyright (C) 2019-2024 GillesPy2 developers. +# Copyright (C) 2019-2025 GillesPy2 developers. # This program is free software: you can redistribute it and/or modify # it under the terms of the GNU General Public License as published by diff --git a/gillespy2/solvers/cpp/c_solver.py b/gillespy2/solvers/cpp/c_solver.py index 30d1b612..6f898005 100644 --- a/gillespy2/solvers/cpp/c_solver.py +++ b/gillespy2/solvers/cpp/c_solver.py @@ -1,5 +1,5 @@ # GillesPy2 is a modeling toolkit for biochemical simulation. -# Copyright (C) 2019-2024 GillesPy2 developers. +# Copyright (C) 2019-2025 GillesPy2 developers. # This program is free software: you can redistribute it and/or modify # it under the terms of the GNU General Public License as published by diff --git a/gillespy2/solvers/cpp/ode_c_solver.py b/gillespy2/solvers/cpp/ode_c_solver.py index 41549191..921d24f1 100644 --- a/gillespy2/solvers/cpp/ode_c_solver.py +++ b/gillespy2/solvers/cpp/ode_c_solver.py @@ -1,5 +1,5 @@ # GillesPy2 is a modeling toolkit for biochemical simulation. -# Copyright (C) 2019-2024 GillesPy2 developers. +# Copyright (C) 2019-2025 GillesPy2 developers. # This program is free software: you can redistribute it and/or modify # it under the terms of the GNU General Public License as published by diff --git a/gillespy2/solvers/cpp/ssa_c_solver.py b/gillespy2/solvers/cpp/ssa_c_solver.py index 098d2d38..fe42a852 100644 --- a/gillespy2/solvers/cpp/ssa_c_solver.py +++ b/gillespy2/solvers/cpp/ssa_c_solver.py @@ -1,5 +1,5 @@ # GillesPy2 is a modeling toolkit for biochemical simulation. -# Copyright (C) 2019-2024 GillesPy2 developers. +# Copyright (C) 2019-2025 GillesPy2 developers. # This program is free software: you can redistribute it and/or modify # it under the terms of the GNU General Public License as published by diff --git a/gillespy2/solvers/cpp/tau_leaping_c_solver.py b/gillespy2/solvers/cpp/tau_leaping_c_solver.py index 47d10034..98017737 100644 --- a/gillespy2/solvers/cpp/tau_leaping_c_solver.py +++ b/gillespy2/solvers/cpp/tau_leaping_c_solver.py @@ -1,5 +1,5 @@ # GillesPy2 is a modeling toolkit for biochemical simulation. -# Copyright (C) 2019-2024 GillesPy2 developers. +# Copyright (C) 2019-2025 GillesPy2 developers. # This program is free software: you can redistribute it and/or modify # it under the terms of the GNU General Public License as published by diff --git a/gillespy2/solvers/numpy/CLE_solver.py b/gillespy2/solvers/numpy/CLE_solver.py index 13a84c14..1bf8eecf 100644 --- a/gillespy2/solvers/numpy/CLE_solver.py +++ b/gillespy2/solvers/numpy/CLE_solver.py @@ -1,5 +1,5 @@ # GillesPy2 is a modeling toolkit for biochemical simulation. -# Copyright (C) 2019-2024 GillesPy2 developers. +# Copyright (C) 2019-2025 GillesPy2 developers. # This program is free software: you can redistribute it and/or modify # it under the terms of the GNU General Public License as published by diff --git a/gillespy2/solvers/numpy/__init__.py b/gillespy2/solvers/numpy/__init__.py index f4ae5cf4..66519fdd 100644 --- a/gillespy2/solvers/numpy/__init__.py +++ b/gillespy2/solvers/numpy/__init__.py @@ -1,5 +1,5 @@ # GillesPy2 is a modeling toolkit for biochemical simulation. -# Copyright (C) 2019-2024 GillesPy2 developers. +# Copyright (C) 2019-2025 GillesPy2 developers. # This program is free software: you can redistribute it and/or modify # it under the terms of the GNU General Public License as published by diff --git a/gillespy2/solvers/numpy/ode_solver.py b/gillespy2/solvers/numpy/ode_solver.py index 75eed12d..93e034b2 100644 --- a/gillespy2/solvers/numpy/ode_solver.py +++ b/gillespy2/solvers/numpy/ode_solver.py @@ -1,5 +1,5 @@ # GillesPy2 is a modeling toolkit for biochemical simulation. -# Copyright (C) 2019-2024 GillesPy2 developers. +# Copyright (C) 2019-2025 GillesPy2 developers. # This program is free software: you can redistribute it and/or modify # it under the terms of the GNU General Public License as published by diff --git a/gillespy2/solvers/numpy/ssa_solver.py b/gillespy2/solvers/numpy/ssa_solver.py index 8a6bb6c5..e153c4b5 100644 --- a/gillespy2/solvers/numpy/ssa_solver.py +++ b/gillespy2/solvers/numpy/ssa_solver.py @@ -1,5 +1,5 @@ # GillesPy2 is a modeling toolkit for biochemical simulation. -# Copyright (C) 2019-2024 GillesPy2 developers. +# Copyright (C) 2019-2025 GillesPy2 developers. # This program is free software: you can redistribute it and/or modify # it under the terms of the GNU General Public License as published by diff --git a/gillespy2/solvers/numpy/tau_hybrid_solver.py b/gillespy2/solvers/numpy/tau_hybrid_solver.py index 470ddf58..7b03cdae 100644 --- a/gillespy2/solvers/numpy/tau_hybrid_solver.py +++ b/gillespy2/solvers/numpy/tau_hybrid_solver.py @@ -1,5 +1,5 @@ # GillesPy2 is a modeling toolkit for biochemical simulation. -# Copyright (C) 2019-2024 GillesPy2 developers. +# Copyright (C) 2019-2025 GillesPy2 developers. # This program is free software: you can redistribute it and/or modify # it under the terms of the GNU General Public License as published by diff --git a/gillespy2/solvers/numpy/tau_leaping_solver.py b/gillespy2/solvers/numpy/tau_leaping_solver.py index 555dbedb..215f4123 100644 --- a/gillespy2/solvers/numpy/tau_leaping_solver.py +++ b/gillespy2/solvers/numpy/tau_leaping_solver.py @@ -1,5 +1,5 @@ # GillesPy2 is a modeling toolkit for biochemical simulation. -# Copyright (C) 2019-2024 GillesPy2 developers. +# Copyright (C) 2019-2025 GillesPy2 developers. # This program is free software: you can redistribute it and/or modify # it under the terms of the GNU General Public License as published by diff --git a/gillespy2/solvers/utilities/Tau.py b/gillespy2/solvers/utilities/Tau.py index 1fa9c3fe..d707ee08 100644 --- a/gillespy2/solvers/utilities/Tau.py +++ b/gillespy2/solvers/utilities/Tau.py @@ -1,5 +1,5 @@ # GillesPy2 is a modeling toolkit for biochemical simulation. -# Copyright (C) 2019-2024 GillesPy2 developers. +# Copyright (C) 2019-2025 GillesPy2 developers. # This program is free software: you can redistribute it and/or modify # it under the terms of the GNU General Public License as published by diff --git a/gillespy2/solvers/utilities/__init__.py b/gillespy2/solvers/utilities/__init__.py index 4c14cfe3..eb672d82 100644 --- a/gillespy2/solvers/utilities/__init__.py +++ b/gillespy2/solvers/utilities/__init__.py @@ -1,5 +1,5 @@ # GillesPy2 is a modeling toolkit for biochemical simulation. -# Copyright (C) 2019-2024 GillesPy2 developers. +# Copyright (C) 2019-2025 GillesPy2 developers. # This program is free software: you can redistribute it and/or modify # it under the terms of the GNU General Public License as published by diff --git a/gillespy2/solvers/utilities/cpp_support_test.py b/gillespy2/solvers/utilities/cpp_support_test.py index 04f08db5..3e3f9167 100644 --- a/gillespy2/solvers/utilities/cpp_support_test.py +++ b/gillespy2/solvers/utilities/cpp_support_test.py @@ -1,5 +1,5 @@ # GillesPy2 is a modeling toolkit for biochemical simulation. -# Copyright (C) 2019-2024 GillesPy2 developers. +# Copyright (C) 2019-2025 GillesPy2 developers. # This program is free software: you can redistribute it and/or modify # it under the terms of the GNU General Public License as published by diff --git a/gillespy2/solvers/utilities/solverutils.py b/gillespy2/solvers/utilities/solverutils.py index 659078c9..557ca2de 100644 --- a/gillespy2/solvers/utilities/solverutils.py +++ b/gillespy2/solvers/utilities/solverutils.py @@ -1,5 +1,5 @@ # GillesPy2 is a modeling toolkit for biochemical simulation. -# Copyright (C) 2019-2024 GillesPy2 developers. +# Copyright (C) 2019-2025 GillesPy2 developers. # This program is free software: you can redistribute it and/or modify # it under the terms of the GNU General Public License as published by diff --git a/gillespy2/stochss/StochSSexport.py b/gillespy2/stochss/StochSSexport.py index e3645a6b..9599fe6b 100644 --- a/gillespy2/stochss/StochSSexport.py +++ b/gillespy2/stochss/StochSSexport.py @@ -1,5 +1,5 @@ # GillesPy2 is a modeling toolkit for biochemical simulation. -# Copyright (C) 2019-2024 GillesPy2 developers. +# Copyright (C) 2019-2025 GillesPy2 developers. # This program is free software: you can redistribute it and/or modify # it under the terms of the GNU General Public License as published by diff --git a/gillespy2/stochss/__init__.py b/gillespy2/stochss/__init__.py index 4c14cfe3..eb672d82 100644 --- a/gillespy2/stochss/__init__.py +++ b/gillespy2/stochss/__init__.py @@ -1,5 +1,5 @@ # GillesPy2 is a modeling toolkit for biochemical simulation. -# Copyright (C) 2019-2024 GillesPy2 developers. +# Copyright (C) 2019-2025 GillesPy2 developers. # This program is free software: you can redistribute it and/or modify # it under the terms of the GNU General Public License as published by