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"cdb6d01e939e10b55aaa7b42eaa8bf59eff5ec49b6af4ec92ef11262812a48bd" +content-hash = "49664d9978edda90824f2a3e868ca6a49f12c375702ff6f79e3740065694f818" diff --git a/pyproject.toml b/pyproject.toml index 62f70fa1..75dcee5e 100644 --- a/pyproject.toml +++ b/pyproject.toml @@ -22,14 +22,21 @@ onnxruntime = "1.21.0" opencv-python = ">=4.11.0.86,<5.0.0.0" ollama = ">=0.4.7,<0.5.0" pypdf2 = ">=3.0.1,<4.0.0" +torch = ">=2.6.0,<3.0.0" +pandas = ">=2.2.3,<3.0.0" +sqlalchemy = ">=2.0.38,<3.0.0" +seaborn = ">=0.13.2,<0.14.0" +xgboost = { version = "3.0.0", allow-prereleases = true, source = "pypi", extras = ["cpu"] } +joblib = "1.5.0" +scipy = "1.15.3" rb-lib = { path = "src/rb-lib", develop = true } - file-utils = { path = "src/file-utils", develop = true } doc-parser = { path = "src/doc-parser", develop = true } audio-transcription = { path = "src/audio-transcription", develop = true } age-and-gender-detection = { path = "src/age_and_gender_detection", develop = true } text-summary = {path = "src/text-summary", develop = true} +age-classifier = { path = "src/age_gender_classifier", develop = true } # Don't add new packages here, add them appropriately in the list above beautifulsoup4 = "^4.13.3" diff --git a/rescuebox/plugins/__init__.py b/rescuebox/plugins/__init__.py index e1bba2ed..d6af2d8a 100644 --- a/rescuebox/plugins/__init__.py +++ b/rescuebox/plugins/__init__.py @@ -12,6 +12,10 @@ # Import plugin modules from doc_parser.main import app as doc_parser_app # type: ignore from file_utils.main import app as file_utils_app # type: ignore +from age_gender_classifier.server.server_onnx import ( + app as age_class_app, + APP_NAME as AGE_CLASSIFIER_APP_NAME, +) @dataclass(frozen=True) @@ -30,6 +34,7 @@ class RescueBoxPlugin: ), RescueBoxPlugin(age_gender_app, AGE_GENDER_APP_NAME, "Age and Gender Classifier"), RescueBoxPlugin(text_summary_app, TEXT_SUM_APP_NAME, "Text summarization library"), + RescueBoxPlugin(age_class_app, AGE_CLASSIFIER_APP_NAME, "Age Classifier"), ] # Ensure this module is importable diff --git a/src/age_gender_classifier/README.md b/src/age_gender_classifier/README.md new file mode 100644 index 00000000..2191f584 --- /dev/null +++ b/src/age_gender_classifier/README.md @@ -0,0 +1,28 @@ +## Age and Gender Classification + +### Additional Setup and Notes + +- **XGBoost dependency:** Mac OSX users must have OpenMP runtime installed for XGBoost to work. On Mac OSX run this command to install. +``` +brew install libomp +``` + +- **Database SQLite:** Using the connection ORMs defined in `src/age_gender_classifier/age_gender_classifier/utils/sqlAlchemy_manager.py`, and a default environment variable in the file that sets the connection string, our project writes model output to a SQLite database called `age_classifier.db` that is created at the project's root. + +- **Get the ONNX models** +In order to run survey_models.py you must download the onnx model files from either this GoogleDrive [link](https://drive.google.com/drive/folders/1IgG6w6lJ9cd8Qlckd7HwdBUjWCd_-gxN), or this shared GoogleDrive [link](https://drive.google.com/drive/folders/1e01jA5WXsukK_NwNnNx4iL50jRCMZQXF), then copy them in their respective directories. + + cp ~/Downloads/v001_model.onnx src/onnx_models/age_classify_v001/v001_model.onnx + cp ~/Downloads/vit_model.onnx src/onnx_models/vit_age_classifier/vit_model.onnx + cp ~/Downloads/fareface_age.onnx src/onnx_models/fareface/fareface_age.onnx + + Alternatively, you could run the `convert_to_onnx.py` files in each directory to regenerate the respective ONNX files. + +You are good to go! + +--- + +### Run on the command line +``` +poetry run python src/age_gender_classifier/age_gender_classifier/server/server_onnx.py /age-classifier/age_classifier src/age_gender_classifier/age_gender_classifier/onnx_models/test_images 20 +``` diff --git a/src/age_gender_classifier/age_gender_classifier/__init__.py b/src/age_gender_classifier/age_gender_classifier/__init__.py new file mode 100644 index 00000000..e69de29b diff --git a/src/age_gender_classifier/age_gender_classifier/eval/README.md b/src/age_gender_classifier/age_gender_classifier/eval/README.md new file mode 100644 index 00000000..198f20a9 --- /dev/null +++ b/src/age_gender_classifier/age_gender_classifier/eval/README.md @@ -0,0 +1,13 @@ +## Evaluating Labeled Data Set + +**Pre-requisite** +Ensure the labeled data set exists in the data store. If not, follow steps in the `init_data` directory. + +**Analyze Model Efficacy** +- Analyze raw labeled data set: `analyze_labeled_data_raw.py` writes charts for age distribution and gender counts to `imgs/` directory. +- Score labeled data: `score_labeled_data.py` runs labeled data through our models and writes scores to the DB. +- Analyze scored labeled data: `analyze_labeled_data_scored.py` visualize model efficacy and writes charts to `imgs/` directory. + +Process is grouped in `eval_main.py` + + poetry run python src/eval/eval_main.py diff --git a/src/age_gender_classifier/age_gender_classifier/eval/analyze_labeled_data_raw.py b/src/age_gender_classifier/age_gender_classifier/eval/analyze_labeled_data_raw.py new file mode 100644 index 00000000..925d3f2e --- /dev/null +++ b/src/age_gender_classifier/age_gender_classifier/eval/analyze_labeled_data_raw.py @@ -0,0 +1,45 @@ +from pathlib import Path +import logging +import pandas as pd +import seaborn as sns +import matplotlib.pyplot as plt + +from age_gender_classifier.utils.common import read_db + +logging.basicConfig(level=logging.INFO) +path = Path(__file__).parent + + +def age_histogram( + df: pd.DataFrame, saveFile: str = "imgs/age_distribution.png" +) -> None: + """""" + sns.histplot(data=df, x="age", kde=True) + plt.savefig(path / saveFile) + logging.info(f" Saved histogram to {saveFile}") + + +def gender_counts(df: pd.DataFrame, saveFile: str = "imgs/gender_counts.png") -> None: + """""" + gender_counts = {0: (df["gender"] == 0).sum(), 1: (df["gender"] == 1).sum()} + sns.barplot( + x=["Male", "Female"], + y=[gender_counts[0], gender_counts[1]], + palette=["gray", "orange"], + hue=["Male", "Female"], + width=0.5, + ) + plt.ylabel("Count") + plt.savefig(path / saveFile) + logging.info(f" Saved histogram to {saveFile}") + + +def main(table: str = "age_gender_labeled"): + """Labeled data set must exist in the database.""" + df = read_db(table_name=table, query=f"SELECT * FROM {table}") + age_histogram(df) + gender_counts(df) + + +if __name__ == "__main__": + main() diff --git a/src/age_gender_classifier/age_gender_classifier/eval/eval_main.py b/src/age_gender_classifier/age_gender_classifier/eval/eval_main.py new file mode 100644 index 00000000..c256f180 --- /dev/null +++ b/src/age_gender_classifier/age_gender_classifier/eval/eval_main.py @@ -0,0 +1,31 @@ +import pandas as pd +from age_gender_classifier.eval.analyze_labeled_data_raw import main as raw_main +from age_gender_classifier.eval.score_labeled_data import main as run_evaluation +from eval.transform_scores import main as transform_outputs + + +def main( + eval_table: str = "age_gender_labeled", raw_plots: bool = False +) -> pd.DataFrame: + """Orchestrate full evaluation pipeline. + + - Plot raw data, if raw_plots is True + - Run eval, query true samples and run Survey models + - Transform outputs, extract predictions from json payload + - Plot predicted data + """ + if raw_plots: + raw_main(eval_table) + + ts, df = run_evaluation() + + df = transform_outputs(t_stamp=ts) + + # TODO: endpoint for visualizations here + # chart scores and true/predicted labels + + return df + + +if __name__ == "__main__": + main() diff --git a/src/age_gender_classifier/age_gender_classifier/eval/evaluate_inputs.py b/src/age_gender_classifier/age_gender_classifier/eval/evaluate_inputs.py new file mode 100644 index 00000000..42c59465 --- /dev/null +++ b/src/age_gender_classifier/age_gender_classifier/eval/evaluate_inputs.py @@ -0,0 +1,47 @@ +from pathlib import Path +import logging +import pandas as pd +import seaborn as sns +import matplotlib.pyplot as plt + +from age_gender_classifier.utils.common import read_db + +logging.basicConfig(level=logging.INFO) +path = Path(__file__).parent + + +def age_histogram( + df: pd.DataFrame, saveFile: str = "imgs/age_distribution.png" +) -> None: + """""" + sns.histplot(data=df, x="age", kde=True) + plt.savefig(path / saveFile) + logging.info(f" Saved histogram to {saveFile}") + + +def gender_counts(df: pd.DataFrame, saveFile: str = "imgs/gender_counts.png") -> None: + """""" + gender_counts = {0: (df["gender"] == 0).sum(), 1: (df["gender"] == 1).sum()} + sns.barplot( + x=["Male", "Female"], + y=[gender_counts[0], gender_counts[1]], + palette=["gray", "orange"], + hue=["Male", "Female"], + width=0.5, + ) + plt.ylabel("Count") + plt.savefig(path / saveFile) + logging.info(f" Saved histogram to {saveFile}") + + +def main(): + """""" + df = read_db( + table_name="age_gender_labeled", query="SELECT * FROM age_gender_labeled" + ) + age_histogram(df) + gender_counts(df) + + +if __name__ == "__main__": + main() diff --git a/src/age_gender_classifier/age_gender_classifier/eval/imgs/age_distribution.png b/src/age_gender_classifier/age_gender_classifier/eval/imgs/age_distribution.png new file mode 100644 index 00000000..6d3530e7 Binary files /dev/null and b/src/age_gender_classifier/age_gender_classifier/eval/imgs/age_distribution.png differ diff --git a/src/age_gender_classifier/age_gender_classifier/eval/imgs/gender_counts.png b/src/age_gender_classifier/age_gender_classifier/eval/imgs/gender_counts.png new file mode 100644 index 00000000..11fb236e Binary files /dev/null and b/src/age_gender_classifier/age_gender_classifier/eval/imgs/gender_counts.png differ diff --git a/src/age_gender_classifier/age_gender_classifier/eval/score_labeled_data.py b/src/age_gender_classifier/age_gender_classifier/eval/score_labeled_data.py new file mode 100644 index 00000000..7de27124 --- /dev/null +++ b/src/age_gender_classifier/age_gender_classifier/eval/score_labeled_data.py @@ -0,0 +1,42 @@ +from pathlib import Path +from typing import Tuple +import logging +import pandas as pd + +from age_gender_classifier.utils.common import read_db +from age_gender_classifier.onnx_models.survey_models import SurveyModels + +logging.basicConfig(level=logging.INFO) +path = Path(__file__).parent + + +def main( + table: str = "age_gender_labeled", mod_size: int = 200 +) -> Tuple[str, pd.DataFrame]: + """Read subset of true data from database, preprocess, run inference against our models, + and return a dataframe. Labeled data set must exist in the database. + + Return: tuple of timestamp as str and dataframe + """ + df = read_db( + table_name=table, + query=f"SELECT id, age, img_name, pixels FROM {table} where id % {mod_size} = 0 order by age", + ) + + imgs = list(df["pixels"]) + ids = list(df["img_name"]) + logging.info( + f" About to run inference on true label subset of size = {len(df)} ..." + ) + + sm = SurveyModels() + df = sm.main_predict_eval(imgs, age_threshold=20, ids=ids) + + logging.info( + " Completed prediction on true labels, returning timestamp and dataframe of predicted results" + ) + return sm.now, df + + +if __name__ == "__main__": + main() diff --git a/src/age_gender_classifier/age_gender_classifier/eval/transform_scores.py b/src/age_gender_classifier/age_gender_classifier/eval/transform_scores.py new file mode 100644 index 00000000..a63bba7b --- /dev/null +++ b/src/age_gender_classifier/age_gender_classifier/eval/transform_scores.py @@ -0,0 +1,49 @@ +from pathlib import Path +import logging +import json +import pandas as pd +from typing import Optional + +from age_gender_classifier.utils.common import read_db + +logging.basicConfig(level=logging.INFO) +path = Path(__file__).parent + + +def flatten_json_scores(df: pd.DataFrame) -> pd.DataFrame: + """Expand json scores from model_output.""" + scores_expanded = pd.json_normalize(df["scores"].apply(lambda x: json.loads(x))) + df = df.join(scores_expanded).drop("scores", axis=1) + logging.info(" Expanded JSON scores") + return df + + +def main(t_stamp: Optional[str] = None) -> pd.DataFrame: + """Read values from DB where created_at = t_stamp, + expand json scores into separate columns, and return a dataframe. + """ + if t_stamp is None: + df = pd.read_csv(path / "temp_output.csv", header=0, index_col=False) + else: + pred_df = read_db( + table_name="model_output", + query=f"SELECT * FROM model_output where created_at = '{t_stamp}' order by created_at", + ) + df = flatten_json_scores(pred_df) + df.to_csv(path / "temp_output.csv", index=False) + + true_df = read_db( + table_name="age_gender_labeled", + query="SELECT age AS true_label, img_name FROM age_gender_labeled", + ) + + df_merged = pd.merge(df, true_df, left_on="imageId", right_on="img_name").drop( + "img_name", axis=1 + ) + df_merged.to_csv(path / "temp_output_labeled.csv", index=False) + + return df_merged + + +if __name__ == "__main__": + main() diff --git a/src/age_gender_classifier/age_gender_classifier/init_data/README.md b/src/age_gender_classifier/age_gender_classifier/init_data/README.md new file mode 100644 index 00000000..b3728659 --- /dev/null +++ b/src/age_gender_classifier/age_gender_classifier/init_data/README.md @@ -0,0 +1,10 @@ +### How to get the evaluation data set + +The evaluation dataset is 199MB in size, too large to check into GitHub. +Download it from [here](https://www.kaggle.com/datasets/nipunarora8/age-gender-and-ethnicity-face-data-csv/data), and save the file in this directory as `age_gender.csv`. + +### Load into SQLite + +Run the `load_db.py` file. This reads the downloaded CSV file, connects to the database, creates a new table if it does not exist, truncates the table, and writes the data. + + poetry run python src/init_data/load_db.py diff --git a/src/age_gender_classifier/age_gender_classifier/init_data/load_db.py b/src/age_gender_classifier/age_gender_classifier/init_data/load_db.py new file mode 100644 index 00000000..275429bf --- /dev/null +++ b/src/age_gender_classifier/age_gender_classifier/init_data/load_db.py @@ -0,0 +1,53 @@ +import os +import numpy as np +from pathlib import Path +import logging +import pandas as pd +from age_gender_classifier.utils.sqlAlchemy_manager import DBManager +from age_gender_classifier.utils.preprocess import is_valid_image, is_damaged + +logging.basicConfig(level=logging.INFO) + + +def read_csv_and_format(fileIn: str = "age_gender.csv") -> pd.DataFrame: + "Read labeled data set and return DataFrame" + path = Path(__file__).parent + file = str(path / fileIn) + if not os.path.exists(file): + raise FileNotFoundError(f" File not found: {file}") + return pd.read_csv(file) + + +def transform_raw_data(df: pd.DataFrame) -> pd.DataFrame: + # cleaning pixels column for image preprocessing + df = df[df["pixels"].apply(is_valid_image)].copy() + df["pixels_array"] = df["pixels"].apply( + lambda x: np.array([int(p) for p in x.split()], dtype=np.uint8).reshape(48, 48) + ) + df = df[~df["pixels_array"].apply(is_damaged)] + df = df.drop(columns=["pixels_array"]) + logging.info(" Completed raw pixel transformations") + return df + + +def clean_load_to_db(df: pd.DataFrame, table_name: str = "age_gender_labeled") -> None: + """Connect to DB, create/truncate table, write df to table.""" + db_uri = os.getenv("DB_CONN_STR") + db = DBManager(db_uri, table_name) + + db.create_table_if_not_exists() + db.truncate_table() + + df.to_sql(table_name, con=db.engine, if_exists="append", index=False) + ct = pd.read_sql(f"SELECT COUNT(*) FROM {table_name}", con=db.engine).iloc[0, 0] + logging.info(f" Clean loaded {ct} records into DB table {table_name}") + + +def main() -> None: + df = read_csv_and_format() + df = transform_raw_data(df) + clean_load_to_db(df) + + +if __name__ == "__main__": + main() diff --git a/src/age_gender_classifier/age_gender_classifier/onnx_models/age_classify_v001/convert_to_onnx.py b/src/age_gender_classifier/age_gender_classifier/onnx_models/age_classify_v001/convert_to_onnx.py new file mode 100644 index 00000000..0ce0d984 --- /dev/null +++ b/src/age_gender_classifier/age_gender_classifier/onnx_models/age_classify_v001/convert_to_onnx.py @@ -0,0 +1,36 @@ +import torch +from transformers import ViTImageProcessor, ViTForImageClassification + + +# Load model and image processor for selected model + + +model_name = "cledoux42/Age_Classify_v001" +output_name = "v001_model.onnx" + +model = ViTForImageClassification.from_pretrained(model_name) +feature_extractor = ViTImageProcessor.from_pretrained(model_name) + +# Set model to evaluation mode +model.eval() + +# Get correct image size +image_size = feature_extractor.size["height"] # Default: 224 +dummy_image = torch.randn(1, 3, image_size, image_size) + +# Convert to ONNX with updated opset version (14+) +onnx_path = output_name +torch.onnx.export( + model, + (dummy_image,), + onnx_path, + input_names=["pixel_values"], + output_names=["logits"], + dynamic_axes={"pixel_values": {0: "batch_size"}, "logits": {0: "batch_size"}}, + opset_version=14, +) + +print(f"Model successfully converted to ONNX and saved at: {onnx_path}") + + +# The onnx file is too large to upload to github, you must generate it yourself by running this script diff --git a/src/age_gender_classifier/age_gender_classifier/onnx_models/age_classify_v001/model.py b/src/age_gender_classifier/age_gender_classifier/onnx_models/age_classify_v001/model.py new file mode 100644 index 00000000..c772df07 --- /dev/null +++ b/src/age_gender_classifier/age_gender_classifier/onnx_models/age_classify_v001/model.py @@ -0,0 +1,81 @@ +import onnxruntime as ort +import os +import numpy as np +import cv2 as cv +from PIL import Image +from age_gender_classifier.utils.preprocess import enhance_image + + +# Preprocessing function +def preprocess_image(image_input, target_size=224): + """ + Preprocess either: + - image_input as an image path(string) to a .jpg/.png file + - image_input as a 48*48 pixel string + - image_input as a 48*48 numpy array + """ + if isinstance(image_input, str): + if os.path.exists(image_input): + image = Image.open(image_input).convert("L") # convert to grayscale + image = image.resize((48, 48)) + image_np = np.array(image, dtype=np.uint8) + elif image_input.count(" ") >= 2303: + pixel_vals = np.array( + [int(p) for p in image_input.strip().split()], dtype=np.uint8 + ) + image_np = pixel_vals.reshape(48, 48) + else: + raise ValueError( + "Invalid string input: not a valid image file or input string" + ) + elif isinstance(image_input, np.ndarray): + image_np = image_input + else: + raise ValueError("Unsupported input type.") + # enhance the image + enhanced = enhance_image(image_np) + # resized to model input size + resized = cv.resize(enhanced, (target_size, target_size)) + # convert to float, normalize, and reshape + final = resized.astype(np.float32) / 255.0 + final = np.stack([final] * 3, axis=0) + final = np.expand_dims(final, axis=0) + return final + + +# Postprocessing function +def postprocess_output(logits): + """ + Apply softmax to the raw logits and return predicted classes for the batch. + """ + exp_logits = np.exp(logits - np.max(logits, axis=1, keepdims=True)) + probabilities = exp_logits / np.sum(exp_logits, axis=1, keepdims=True) + predicted_classes = np.argmax(probabilities, axis=1) + return predicted_classes, probabilities + + +# Mapping from classification ids to age ranges (updated based on model's id2label) +id2label = { + 0: "0-2", + 1: "10-19", + 2: "20-29", + 3: "3-9", + 4: "30-39", + 5: "40-49", + 6: "50-59", + 7: "60-69", + 8: "70-79", +} + + +# Run inference +def predict(image_input, onnx_path): + # Load ONNX model + session = ort.InferenceSession(onnx_path, providers=["CPUExecutionProvider"]) + input_tensor = preprocess_image(image_input) + outputs = session.run(["logits"], {"pixel_values": input_tensor})[0] + predicted_classes, probabilities = postprocess_output(outputs) + predicted_class = predicted_classes[0] + predicted_label = id2label.get(predicted_class, "Unknown") + confidence = probabilities[0][predicted_class] + return predicted_label, confidence diff --git a/src/age_gender_classifier/age_gender_classifier/onnx_models/fairface/convert_to_onnx.py b/src/age_gender_classifier/age_gender_classifier/onnx_models/fairface/convert_to_onnx.py new file mode 100644 index 00000000..60be01ce --- /dev/null +++ b/src/age_gender_classifier/age_gender_classifier/onnx_models/fairface/convert_to_onnx.py @@ -0,0 +1,34 @@ +from transformers import ViTForImageClassification +from transformers import ViTImageProcessor +import torch +from pathlib import Path + +# Load model and processor from HuggingFace +model_name = "dima806/fairface_age_image_detection" +model = ViTForImageClassification.from_pretrained(model_name) +processor = ViTImageProcessor.from_pretrained(model_name) + +# Set model to evaluation mode +model.eval() + +# Dummy input for ONNX export +dummy_input = torch.randn(1, 3, 224, 224) # ViT expects (B, C, H, W) + +# Output path +output_dir = Path("onnx_exports") +output_dir.mkdir(exist_ok=True) +onnx_model_path = output_dir / "fairface_age.onnx" + + +# Export to ONNX +torch.onnx.export( + model, + dummy_input, + onnx_model_path.as_posix(), + input_names=["pixel_values"], + output_names=["logits"], + dynamic_axes={"pixel_values": {0: "batch_size"}, "logits": {0: "batch_size"}}, + opset_version=14, +) + +print(f"Model exported to: {onnx_model_path.resolve()}") diff --git a/src/age_gender_classifier/age_gender_classifier/onnx_models/fairface/model.py b/src/age_gender_classifier/age_gender_classifier/onnx_models/fairface/model.py new file mode 100644 index 00000000..a77d1301 --- /dev/null +++ b/src/age_gender_classifier/age_gender_classifier/onnx_models/fairface/model.py @@ -0,0 +1,86 @@ +import onnxruntime as ort +import os +import numpy as np +import cv2 as cv +from PIL import Image +from age_gender_classifier.utils.preprocess import enhance_image + + +# Preprocessing function +def preprocess_image(image_input, target_size=224): + """ + Preprocess either: + - image_input as an image path(string) to a .jpg/.png file + - image_input as a 48*48 pixel string + - image_input as a 48*48 numpy array + """ + if isinstance(image_input, str): + if os.path.exists(image_input): + image = Image.open(image_input).convert("L") # convert to grayscale + image = image.resize((48, 48)) + image_np = np.array(image, dtype=np.uint8) + elif image_input.count(" ") >= 2303: + pixel_vals = np.array( + [int(p) for p in image_input.strip().split()], dtype=np.uint8 + ) + image_np = pixel_vals.reshape(48, 48) + else: + raise ValueError( + "Invalid string input: not a valid image file or input string" + ) + elif isinstance(image_input, np.ndarray): + image_np = image_input + else: + raise ValueError("Unsupported input type.") + # enhance the image + enhanced = enhance_image(image_np) + # resized to model input size + resized = cv.resize(enhanced, (target_size, target_size)) + # convert to float, normalize, and reshape + final = resized.astype(np.float32) / 255.0 + final = np.stack([final] * 3, axis=0) + final = np.expand_dims(final, axis=0) + return final + + +# Postprocessing function +def postprocess_output(logits): + """ + Apply softmax to the raw logits and return predicted classes for the batch. + """ + exp_logits = np.exp(logits - np.max(logits, axis=1, keepdims=True)) + probabilities = exp_logits / np.sum(exp_logits, axis=1, keepdims=True) + predicted_classes = np.argmax(probabilities, axis=1) + return predicted_classes, probabilities + + +# Mapping from classification ids to age ranges (based on fairface config) +id2label = { + 0: "0-2", + 1: "3-9", + 2: "10-19", + 3: "20-29", + 4: "30-39", + 5: "40-49", + 6: "50-59", + 7: "60-69", + 8: "more than 70", +} + + +# Run inference +def predict(image_input, onnx_path): + """ + Load ONNX model and predict age group from an image. + + Returns: + (label: str, confidence: float) + """ + session = ort.InferenceSession(onnx_path, providers=["CPUExecutionProvider"]) + input_tensor = preprocess_image(image_input) + outputs = session.run(["logits"], {"pixel_values": input_tensor})[0] + predicted_classes, probabilities = postprocess_output(outputs) + predicted_class = predicted_classes[0] + predicted_label = id2label.get(predicted_class, "Unknown") + confidence = probabilities[0][predicted_class] + return predicted_label, confidence diff --git a/src/age_gender_classifier/age_gender_classifier/onnx_models/survey_models.py b/src/age_gender_classifier/age_gender_classifier/onnx_models/survey_models.py new file mode 100644 index 00000000..2adcfa27 --- /dev/null +++ b/src/age_gender_classifier/age_gender_classifier/onnx_models/survey_models.py @@ -0,0 +1,352 @@ +# survey_models.py + +import sys +import os +import json +from pathlib import Path +from datetime import datetime +from typing import List, Optional +import logging +import pandas as pd +from age_gender_classifier.onnx_models.age_classify_v001.model import ( + predict as predict_age_classifier, +) +from age_gender_classifier.onnx_models.vit_age_classifier.model import ( + predict as predict_vit_age_classifier, +) +from age_gender_classifier.onnx_models.fairface.model import ( + predict as predict_fairface_classifier, +) +import joblib +from age_gender_classifier.utils.common import write_db, read_db + +logging.basicConfig(level=logging.INFO) + +# integer codes XGBoost model was trained on +_LABEL_MAP = { + "0-2": 0, + "3-9": 1, + "10-19": 2, + "20-29": 3, + "30-39": 4, + "40-49": 5, + "50-59": 6, + "60-69": 7, + "more than 70": 8, + "70-79": 8, +} +_INT_TO_LABEL = {v: k for k, v in _LABEL_MAP.items()} + + +def _fix(label: str) -> str: + return "more than 70" if label == "70-79" else label + + +# _XGB = joblib.load("src/age_gender_classifier/age_gender_classifier/onnx_models/xgboost_model.pkl") + + +def label_to_binary(label, threshold): + """ + Convert the age range label to a binary value based on a threshold. + + Args: + label (str): Age range label (e.g., "10-19", "20-29", "more than 70"). + threshold (int): The age threshold (e.g., 20 or 30). + + Returns: + bool: True if the lower bound of the age range is >= threshold, else False. + """ + if label.lower().startswith("more"): + # Treat "more than 70" as age 70 for threshold comparisons. + age_lower = 70 + else: + try: + parts = label.split("-") + age_lower = int(parts[0]) + except Exception: + age_lower = 0 + return age_lower >= threshold + + +class SurveyModels: + def __init__(self): + self.base_path = Path(__file__).resolve().parent + self.model1_path = str(self.base_path / "age_classify_v001/v001_model.onnx") + self.model2_path = str(self.base_path / "vit_age_classifier/vit_model.onnx") + self.model3_path = str(self.base_path / "fairface/fairface_age.onnx") + self.now = datetime.now().isoformat() + self._XGB = joblib.load( + "src/age_gender_classifier/age_gender_classifier/onnx_models/xgboost_model.pkl" + ) + + # Check if model files exist + if not os.path.exists(self.model1_path): + raise FileNotFoundError(f"Model file not found: {self.model1_path}") + if not os.path.exists(self.model2_path): + raise FileNotFoundError(f"Model file not found: {self.model2_path}") + if not os.path.exists(self.model3_path): + raise FileNotFoundError(f"Model file not found: {self.model3_path}") + + def predict(self, image_path, imgId): + """ + Run (both, third to be added) age classification models on the input image. + + Args: + image_path (str): Path to the input image. + + Returns: + dict: A dictionary containing the predicted label and confidence for each model. + e.g., {"age_classify_v001": (label, confidence), "vit_age_classifier": (label, confidence)} + """ + # Run the first model + model1_label, model1_confidence = predict_age_classifier( + image_path, self.model1_path + ) + + # Run the second model + model2_label, model2_confidence = predict_vit_age_classifier( + image_path, self.model2_path + ) + + # Run the third model + model3_label, model3_confidence = predict_fairface_classifier( + image_path, self.model3_path + ) + + return { + "model_name": [ + "age_classify_v001", + "vit_age_classifier", + "fairface_classifier", + ], + "scores": [ + { + "label": model1_label, + "confidence": str(model1_confidence), + "imageId": imgId, + }, + { + "label": model2_label, + "confidence": str(model2_confidence), + "imageId": imgId, + }, + { + "label": model3_label, + "confidence": str(model3_confidence), + "imageId": imgId, + }, + ], + "created_at": [self.now] * 3, + } + + def predict_over_under(self, age, image_path, imgId): + """ + Poll all 3 models and convert their age predictions into a binary over/under classification. + Use majority vote instead of random selection. + + Returns: + dict with keys: + - model_name: ["predict_over_under"] + - scores: [{ + "majority_vote": majority_vote (bool), + "binanry_results": { + model_name: (bool, confidence), ... + } + }] + - created_at: [timestamp] + """ + allowed_ages = {3, 10, 20, 30, 40, 50, 60, 70} + if age not in allowed_ages: + raise ValueError( + f"Invalid age threshold: {age}. Allowed values are {sorted(allowed_ages)}." + ) + + pred = self.predict(image_path, imgId) + binary_results = {} + + features = { + "age_classify_v001_label": _LABEL_MAP[_fix(pred["scores"][0]["label"])], + "age_classify_v001_confidence": float(pred["scores"][0]["confidence"]), + "vit_age_classifier_label": _LABEL_MAP[_fix(pred["scores"][1]["label"])], + "vit_age_classifier_confidence": float(pred["scores"][1]["confidence"]), + "fairface_classifier_label": _LABEL_MAP[_fix(pred["scores"][2]["label"])], + "fairface_classifier_confidence": float(pred["scores"][2]["confidence"]), + } + ens_idx = self._XGB.predict(pd.DataFrame([features]))[0] + ens_label = _INT_TO_LABEL[ens_idx] + ensemble_over = label_to_binary(ens_label, age) + + # binary_results["xgb_ensemble"] = (ensemble_over, "1.0") + + majority_vote = ensemble_over + + return { + "model_name": ["predict_over_under"], + "scores": [ + { + "majority_vote": majority_vote, + "binary_results": binary_results, + "imageId": imgId, + } + ], + "created_at": [self.now], + } + + def _predict_eval_results(self, age: int, image_path: str, imgId) -> dict: + """ + Run the age prediction models once and return both the raw predictions (individual labels) + and the binary over/under vote result (using majority vote) for the specified age threshold. + + Args: + age (int): The age threshold to convert the predictions to binary. + image_path (str): Path to the input image. + imgId: An identifier for the image. + + Returns: + dict: A dictionary with keys: + - 'raw_predictions': Output of the original predict() method. + - 'binary_vote': A dictionary with: + * 'majority_vote': The overall binary decision (True if at least 2 models are "over"). + * 'binary_results': A dict mapping each model name to a tuple (is_over, confidence). + * 'imageId': The provided image identifier. + - 'created_at': The timestamp (from self.now). + """ + # Run predictions only once + raw_predictions = self.predict(image_path, imgId) + + # Initialize binary conversion and vote counting + binary_results = {} + vote_counts = {True: 0, False: 0} + + for i, model_name in enumerate(raw_predictions["model_name"]): + # Get the raw label and confidence from predictions + label = raw_predictions["scores"][i]["label"] + confidence = raw_predictions["scores"][i]["confidence"] + # Convert to binary using the helper function + is_over = label_to_binary(label, age) + binary_results[model_name] = (is_over, confidence) + vote_counts[is_over] += 1 + + # Majority vote for whether the picture is over the threshold + majority_vote = True if vote_counts[True] >= 2 else False + + # Combine both results into one output dictionary + return { + "raw_predictions": raw_predictions, + "binary_vote": { + "majority_vote": majority_vote, + "binary_results": binary_results, + "imageId": imgId, + }, + "created_at": raw_predictions["created_at"], + } + + def main_predict_eval( + self, images: List, age_threshold: int = 40, ids: Optional[List] = None + ) -> pd.DataFrame: + """ + Loop over a list of images and, for each, run the combined evaluation (raw predictions plus binary vote) + in one pass. Returns a DataFrame with one row per image containing columns: + - imageId + - raw_predictions (as a JSON string) + - binary_vote (as a JSON string) + - created_at timestamp + + This avoids running separate/redundant predict and predict_over_under calls + """ + ids = list(range(len(images))) if ids is None else ids + results = [] + for imgId, img in zip(ids, images): + combined_result = self._predict_eval_results(age_threshold, img, imgId) + row = { + "imageId": imgId, + "raw_predictions": json.dumps(combined_result["raw_predictions"]), + "binary_vote": json.dumps(combined_result["binary_vote"]), + "created_at": ( + combined_result["created_at"][0] + if isinstance(combined_result["created_at"], list) + else combined_result["created_at"] + ), + } + results.append(row) + + df = pd.DataFrame(results) + write_db(df, "model_output") + logging.info( + f"Successfully completed combined evaluation for {len(images)} images." + ) + return df + + def main_predict( + self, images: List, age_threshold: int = 40, ids: Optional[List] = None + ) -> pd.DataFrame: + """Loop list of images, for each, run prediction and write results to db.""" + ids = list(range(len(images))) if ids is None else ids + ct = 0 + df = None + for id, img in zip(ids, images): + df1 = pd.DataFrame(self.predict(img, id)) + df2 = pd.DataFrame(self.predict_over_under(age_threshold, img, id)) + dfs = [df1, df2] + if ct > 0: + dfs = [df] + dfs + df = pd.concat(dfs, axis=0).reset_index(drop=True) + ct += 1 + + df["scores"] = df["scores"].apply(lambda x: json.dumps(x)) + write_db(df, "model_output") + logging.info( + f" Successfully completed {len(df)} predictions for {len(images)} images." + ) + return df + + +# Command Line Execution +if __name__ == "__main__": + if len(sys.argv) < 3: + print("Usage: python survey_models.py ") + print("Allowed age thresholds: 3, 10, 20, 30, 40, 50, 60, 70") + sys.exit(1) + + image_path = sys.argv[1] + + try: + age_threshold = int(sys.argv[2]) + except ValueError: + print("Error: Age threshold must be an integer.") + sys.exit(1) + + allowed_ages = {3, 10, 20, 30, 40, 50, 60, 70} + if age_threshold not in allowed_ages: + print( + f"Error: Invalid age threshold {age_threshold}. Allowed values: {sorted(allowed_ages)}" + ) + sys.exit(1) + + try: + survey = SurveyModels() + except FileNotFoundError as e: + print(e) + sys.exit(1) + + # Full Model Predictions + # predictions = survey.predict(image_path) + + # print("\nModel Predictions:") + # print(predictions) + # for x in predictions.items(): + # print(x) + # for model_name, (label, confidence) in predictions.items(): + # print(f"{model_name}: {label} (confidence: {confidence:.2f})") + + # Over/Under Prediction for the specified age + # binary_result, conf_result = survey.predict_over_under(age_threshold, image_path) + # chose_model = survey.predict_over_under(age_threshold, image_path) + # print(chose_model) + # print(f"\nOver/Under {age_threshold}: {'Over' if binary_result else 'Under'} {age_threshold} (confidence: {conf_result:.2f})") + df = survey.main_predict([image_path], age_threshold=40) + df2 = read_db("model_output", "SELECT * FROM model_output") + + # logging.info("Current run", df) + # logging.info("Read DB", df2.head()) + # python src/onnx_models/survey_models.py src/onnx_models/test_images/lebron.jpg 40 diff --git a/src/age_gender_classifier/age_gender_classifier/onnx_models/test_images/baby.jpg b/src/age_gender_classifier/age_gender_classifier/onnx_models/test_images/baby.jpg new file mode 100644 index 00000000..8bcd9b87 Binary files /dev/null and b/src/age_gender_classifier/age_gender_classifier/onnx_models/test_images/baby.jpg differ diff --git a/src/age_gender_classifier/age_gender_classifier/onnx_models/test_images/beyonce.jpg b/src/age_gender_classifier/age_gender_classifier/onnx_models/test_images/beyonce.jpg new file mode 100644 index 00000000..3458ef46 Binary files /dev/null and b/src/age_gender_classifier/age_gender_classifier/onnx_models/test_images/beyonce.jpg differ diff --git a/src/age_gender_classifier/age_gender_classifier/onnx_models/test_images/billieEilish.jpg b/src/age_gender_classifier/age_gender_classifier/onnx_models/test_images/billieEilish.jpg new file mode 100644 index 00000000..eac80906 Binary files /dev/null and b/src/age_gender_classifier/age_gender_classifier/onnx_models/test_images/billieEilish.jpg differ diff --git a/src/age_gender_classifier/age_gender_classifier/onnx_models/test_images/lebron.jpg b/src/age_gender_classifier/age_gender_classifier/onnx_models/test_images/lebron.jpg new file mode 100644 index 00000000..d4adf4fe Binary files /dev/null and b/src/age_gender_classifier/age_gender_classifier/onnx_models/test_images/lebron.jpg differ diff --git a/src/age_gender_classifier/age_gender_classifier/onnx_models/test_images/morganFreeman.jpg b/src/age_gender_classifier/age_gender_classifier/onnx_models/test_images/morganFreeman.jpg new file mode 100644 index 00000000..f77c544a Binary files /dev/null and b/src/age_gender_classifier/age_gender_classifier/onnx_models/test_images/morganFreeman.jpg differ diff --git a/src/age_gender_classifier/age_gender_classifier/onnx_models/vit_age_classifier/convert_to_onnx.py b/src/age_gender_classifier/age_gender_classifier/onnx_models/vit_age_classifier/convert_to_onnx.py new file mode 100644 index 00000000..1d8cabeb --- /dev/null +++ b/src/age_gender_classifier/age_gender_classifier/onnx_models/vit_age_classifier/convert_to_onnx.py @@ -0,0 +1,39 @@ +import torch +from transformers import ViTImageProcessor, ViTForImageClassification + + +# Load model and image processor for selected model + +# model_name = "nateraw/vit-age-classifier" +# output_name = "vit_age_classifier.onnx" + + +model_name = "cledoux42/Age_Classify_v001" +output_name = "vit_model.onnx" + +model = ViTForImageClassification.from_pretrained(model_name) +feature_extractor = ViTImageProcessor.from_pretrained(model_name) + +# Set model to evaluation mode +model.eval() + +# Get correct image size +image_size = feature_extractor.size["height"] # Default: 224 +dummy_image = torch.randn(1, 3, image_size, image_size) + +# Convert to ONNX with updated opset version (14+) +onnx_path = output_name +torch.onnx.export( + model, + (dummy_image,), + onnx_path, + input_names=["pixel_values"], + output_names=["logits"], + dynamic_axes={"pixel_values": {0: "batch_size"}, "logits": {0: "batch_size"}}, + opset_version=14, +) + +print(f"Model successfully converted to ONNX and saved at: {onnx_path}") + + +# The onnx file is too large to upload to github, you must generate it yourself by running this script diff --git a/src/age_gender_classifier/age_gender_classifier/onnx_models/vit_age_classifier/model.py b/src/age_gender_classifier/age_gender_classifier/onnx_models/vit_age_classifier/model.py new file mode 100644 index 00000000..ea97527d --- /dev/null +++ b/src/age_gender_classifier/age_gender_classifier/onnx_models/vit_age_classifier/model.py @@ -0,0 +1,81 @@ +import onnxruntime as ort +import os +import numpy as np +import cv2 as cv +from PIL import Image +from age_gender_classifier.utils.preprocess import enhance_image + + +# Preprocessing function +def preprocess_image(image_input, target_size=224): + """ + Preprocess either: + - image_input as an image path(string) to a .jpg/.png file + - image_input as a 48*48 pixel string + - image_input as a 48*48 numpy array + """ + if isinstance(image_input, str): + if os.path.exists(image_input): + image = Image.open(image_input).convert("L") # convert to grayscale + image = image.resize((48, 48)) + image_np = np.array(image, dtype=np.uint8) + elif image_input.count(" ") >= 2303: + pixel_vals = np.array( + [int(p) for p in image_input.strip().split()], dtype=np.uint8 + ) + image_np = pixel_vals.reshape(48, 48) + else: + raise ValueError( + "Invalid string input: not a valid image file or input string" + ) + elif isinstance(image_input, np.ndarray): + image_np = image_input + else: + raise ValueError("Unsupported input type.") + # enhance the image + enhanced = enhance_image(image_np) + # resized to model input size + resized = cv.resize(enhanced, (target_size, target_size)) + # convert to float, normalize, and reshape + final = resized.astype(np.float32) / 255.0 + final = np.stack([final] * 3, axis=0) + final = np.expand_dims(final, axis=0) + return final + + +# Postprocessing function +def postprocess_output(logits): + """ + Apply softmax to the raw logits and return predicted classes for the batch. + """ + exp_logits = np.exp(logits - np.max(logits, axis=1, keepdims=True)) + probabilities = exp_logits / np.sum(exp_logits, axis=1, keepdims=True) + predicted_classes = np.argmax(probabilities, axis=1) + return predicted_classes, probabilities + + +# Mapping from classification ids to age ranges +id2label = { + 0: "0-2", + 1: "3-9", + 2: "10-19", + 3: "20-29", + 4: "30-39", + 5: "40-49", + 6: "50-59", + 7: "60-69", + 8: "more than 70", +} + + +# Run inference +def predict(image_input, onnx_path): + # Load ONNX model + session = ort.InferenceSession(onnx_path, providers=["CPUExecutionProvider"]) + input_tensor = preprocess_image(image_input) + outputs = session.run(["logits"], {"pixel_values": input_tensor})[0] + predicted_classes, probabilities = postprocess_output(outputs) + predicted_class = predicted_classes[0] + predicted_label = id2label.get(predicted_class, "Unknown") + confidence = probabilities[0][predicted_class] + return predicted_label, confidence diff --git a/src/age_gender_classifier/age_gender_classifier/onnx_models/xgboost_model.pkl b/src/age_gender_classifier/age_gender_classifier/onnx_models/xgboost_model.pkl new file mode 100644 index 00000000..d195d0a3 Binary files /dev/null and b/src/age_gender_classifier/age_gender_classifier/onnx_models/xgboost_model.pkl differ diff --git a/src/age_gender_classifier/age_gender_classifier/server/__init__.py b/src/age_gender_classifier/age_gender_classifier/server/__init__.py new file mode 100644 index 00000000..e69de29b diff --git a/src/age_gender_classifier/age_gender_classifier/server/server_onnx.py b/src/age_gender_classifier/age_gender_classifier/server/server_onnx.py new file mode 100644 index 00000000..04302d4f --- /dev/null +++ b/src/age_gender_classifier/age_gender_classifier/server/server_onnx.py @@ -0,0 +1,123 @@ +from typing import TypedDict +from pathlib import Path +import json +import logging + +from age_gender_classifier.onnx_models.survey_models import SurveyModels + +from rb.lib.ml_service import MLService +from rb.api.models import ( + DirectoryInput, + TextResponse, + InputSchema, + InputType, + ResponseBody, + TaskSchema, + ParameterSchema, + IntParameterDescriptor, +) +import typer + +logging.basicConfig(level=logging.INFO) + + +def create_transform_case_task_schema() -> TaskSchema: + """ + Configure UI Elements in RescueBox Desktop + InputType.DIRECTORY: a single directory path + """ + input_schema = InputSchema( + key="input_dataset", + label="Path to the directory containing images or videos", + input_type=InputType.DIRECTORY, + ) + param_schema = ParameterSchema( + key="age_threshold", + label="Age Threshold for Over/Under Prediction", + value=IntParameterDescriptor( + default=20, + ), + ) + return TaskSchema(inputs=[input_schema], parameters=[param_schema]) + + +class Inputs(TypedDict): + """Specify the input and output types for the task""" + + input_dataset: DirectoryInput + + +class Parameters(TypedDict): + age_threshold: int + + +APP_NAME = "age-classifier" +server = MLService(APP_NAME) + +server.add_app_metadata( + name=APP_NAME, + author="UMass Rescue", + version="0.1.0", + info="Model to classify ages from images.", + plugin_name=APP_NAME, +) + + +def age_classifier(inputs: Inputs, parameters: Parameters) -> ResponseBody: + """ + In Flask-ML, an inference function takes two arguments: inputs and parameters. + The types of inputs and parameters must be Python TypedDict types. + """ + input_path = Path(inputs["input_dataset"].path) + files = [str(fpath) for fpath in input_path.iterdir() if fpath.is_file()] + ids = [fpath.stem for fpath in input_path.iterdir() if fpath.is_file()] + + models = SurveyModels() + df_results = models.main_predict( + files, age_threshold=parameters["age_threshold"], ids=ids + ) + + return ResponseBody( + TextResponse( + value=json.dumps(df_results.T.to_dict(), indent=4), + title="Output for Age Classifier Models", + ) + ) + + +def cli_parser(path: str): + image_directory = path + try: + logging.info(f"Parsing CLI input path: {image_directory}") + image_directory = Path(image_directory) + if not image_directory.exists(): + raise ValueError(f"Directory {image_directory} does not exist.") + if not image_directory.is_dir(): + raise ValueError(f"Path {image_directory} is not a directory.") + inputs = Inputs(input_dataset=DirectoryInput(path=image_directory)) + return inputs + except Exception as e: + logging.error(f"Error parsing CLI input: {e}") + return typer.Abort() + + +def parameters_cli_parse(age_threshold: str) -> Parameters: + return Parameters(age_threshold=int(age_threshold)) + + +server.add_ml_service( + rule="/age_classifier", + ml_function=age_classifier, + inputs_cli_parser=typer.Argument(parser=cli_parser, help="Image directory path"), + parameters_cli_parser=typer.Argument( + parser=parameters_cli_parse, help="Age threshhold" + ), + short_title="Age and Gender Classifier", + order=0, + task_schema_func=create_transform_case_task_schema, +) + + +app = server.app +if __name__ == "__main__": + app() diff --git a/src/age_gender_classifier/age_gender_classifier/utils/common.py b/src/age_gender_classifier/age_gender_classifier/utils/common.py new file mode 100644 index 00000000..1a2cf986 --- /dev/null +++ b/src/age_gender_classifier/age_gender_classifier/utils/common.py @@ -0,0 +1,31 @@ +import os +from typing import Optional +import logging +import pandas as pd +from age_gender_classifier.utils.sqlAlchemy_manager import DBManager + +logging.basicConfig(level=logging.INFO) +db_uri = os.getenv("DB_CONN_STR", "sqlite:///age_classifier.db") + + +def read_db( + table_name: str = "age_gender_labeled", query: Optional[str] = None +) -> pd.DataFrame: + """Read records from custom query into pandas DataFrame.""" + if query is None: + logging.warning("No query provided. Returning None.") + return None + + db = DBManager(db_uri, table_name) + df = pd.read_sql(query, con=db.engine) + logging.info(f" Retrieved {len(df)} records from DB table {table_name}") + return df + + +def write_db(df: pd.DataFrame, table_name: str = "model_output") -> None: + """Write pandas DataFrame of model output into DB.""" + + db = DBManager(db_uri, table_name) + db.create_table_if_not_exists() + df.to_sql(table_name, con=db.engine, if_exists="append", index=False) + logging.info(f" Wrote {len(df)} records to DB table {table_name}") diff --git a/src/age_gender_classifier/age_gender_classifier/utils/preprocess.py b/src/age_gender_classifier/age_gender_classifier/utils/preprocess.py new file mode 100644 index 00000000..fb2a4f22 --- /dev/null +++ b/src/age_gender_classifier/age_gender_classifier/utils/preprocess.py @@ -0,0 +1,37 @@ +import cv2 as cv +import logging +import numpy as np + +logging.basicConfig(level=logging.INFO) # shows logs in the system + + +def is_valid_image(pixel_string): + """checks if pixel string exactly contains 48*48 = 2304 values""" + pixel = pixel_string.strip().split() + return len(pixel) == 48 * 48 + + +def is_damaged(image, threshold_low=10, threshold_high=255, min_variance=10): + """ + Detects damaged images based on pixel intensity distribution. + - threshold_low: If pixels are below this, the image may be too dark. + - threshold_high: If pixels are above this, the image may be too bright. + - min_variance: If the variance is too low, image may lack details + """ + if np.mean(image) < threshold_low or np.mean(image) > threshold_high: + return True # likely corrupted + # Check if the image lacks details (variance too low) + if np.mean(image) < min_variance: + return True # likely corrupted + return False + + +def enhance_image(image): + """kernel, sharpening, denoising, and bilateral filtering techniques for image preprocessing""" + kernel = np.array([[0, -0.5, 0], [-0.5, 3, -0.5], [0, -0.5, 0]]) # Sharpening + sharpened = cv.filter2D(image, -1, kernel) + smoothed = cv.bilateralFilter(sharpened, d=3, sigmaColor=55, sigmaSpace=55) + denoised = cv.fastNlMeansDenoising( + smoothed, h=5, templateWindowSize=7, searchWindowSize=21 + ) + return denoised diff --git a/src/age_gender_classifier/age_gender_classifier/utils/sqlAlchemy_manager.py b/src/age_gender_classifier/age_gender_classifier/utils/sqlAlchemy_manager.py new file mode 100644 index 00000000..c79bba75 --- /dev/null +++ b/src/age_gender_classifier/age_gender_classifier/utils/sqlAlchemy_manager.py @@ -0,0 +1,138 @@ +from sqlalchemy import ( + create_engine, + Column, + Integer, + String, + Boolean, + DateTime, + JSON, + func, +) +from sqlalchemy.ext.declarative import declarative_base +from sqlalchemy import text +from sqlalchemy.orm import sessionmaker +import logging + + +Base = declarative_base() + + +class LabeledAges(Base): + __tablename__ = "age_gender_labeled" + id = Column(Integer, primary_key=True, autoincrement=True) + age = Column(Integer, nullable=True) + ethnicity = Column(Integer, nullable=True) + gender = Column(Boolean, nullable=True) + img_name = Column(String, nullable=True) + pixels = Column(String, nullable=True) + + +class ModelOutput(Base): + __tablename__ = "model_output" + id = Column(Integer, primary_key=True, autoincrement=True) + model_name = Column(String, nullable=False) + scores = Column(JSON, nullable=False) + created_at = Column(DateTime, nullable=False, default=func.now()) + + +defined_tables = {"age_gender_labeled": LabeledAges, "model_output": ModelOutput} + + +class DBManager: + def __init__(self, db_url: str, table_name: str) -> None: + """Initialize the database connection. + + Args: + db_url (str): The database connection URL. + table_name (str): The table name to operate on. + """ + self.engine = create_engine(db_url) + self.Session = sessionmaker(bind=self.engine) + + if table_name not in defined_tables: + raise ValueError(f"Table '{table_name}' is not recognized.") + self.table = defined_tables[table_name] + + def create_table_if_not_exists(self) -> None: + """Create the users table if it does not exist.""" + Base.metadata.create_all(self.engine) + + def insert_record(self, **kwargs) -> None: + """Insert a new record into the specified table. + + Args: + kwargs: Column values for the table. + """ + session = self.Session() + try: + new_rec = self.table(**kwargs) + session.add(new_rec) + session.commit() + except Exception as e: + session.rollback() + logging.error(f"Error inserting record: {e}") + finally: + session.close() + + def update_record(self, record_id: int, **kwargs) -> None: + """Update an existing record in the specified table. + + Args: + record_id (int): The ID of the record to update. + kwargs: Fields to update with new values. + """ + session = self.Session() + try: + rec = session.query(self.table).filter_by(id=record_id).first() + if rec: + for key, value in kwargs.items(): + if hasattr(rec, key): + setattr(rec, key, value) + session.commit() + except Exception as e: + session.rollback() + logging.error(f"Error updating record: {e}") + finally: + session.close() + + def delete_user(self, record_id: int) -> None: + """Delete a record from the specified table by ID. + + Args: + record_id (int): The ID of the record to delete. + """ + session = self.Session() + try: + rec = session.query(self.table).filter_by(id=record_id).first() + if rec: + session.delete(rec) + session.commit() + except Exception as e: + session.rollback() + logging.error(f"Error deleting record: {e}") + finally: + session.close() + + def truncate_table(self) -> None: + """Truncate the specified table.""" + session = self.Session() + try: + session.execute(text(f"DELETE FROM {self.table.__tablename__}")) + session.commit() + except Exception as e: + session.rollback() + logging.error(f"Error truncating table {self.table.__tablename__}: {e}") + finally: + session.close() + + def drop_table(self, table: str) -> None: + """Drop specified table.""" + session = self.Session() + try: + session.execute(text(f"DROP TABLE IF EXISTS {table}")) + session.commit() + except Exception as e: + session.rollback() + logging.error(f"Error dropping table {table}: {e}") + finally: + session.close() diff --git a/src/age_gender_classifier/pyproject.toml b/src/age_gender_classifier/pyproject.toml new file mode 100644 index 00000000..7a261d25 --- /dev/null +++ b/src/age_gender_classifier/pyproject.toml @@ -0,0 +1,32 @@ +[project] +name = "age-classifier" +version = "0.1.0" +description = "UMass Rescue Box: Age and Gender Classification" +authors = [ + {name = "James Bardowski",email = "jbardowski@umass.edu"}, + {name = "Juhi Manish Jain",email = "juhimanishja@umass.edu"}, + {name = "Jacob Sweet",email = "jdsweet@umass.edu"} +] +readme = "README.md" + +dependencies = [ + "torch", + "numpy", + "pandas", + "requests", + "opencv-python", + "sqlalchemy", + "seaborn", + "onnxruntime", + "joblib", + "xgboost" +] + +[tool.poetry] +packages = [ + { include = "age_gender_classifier"} +] + +[build-system] +requires = ["poetry-core"] +build-backend = "poetry.core.masonry.api" diff --git a/src/age_gender_classifier/tests/test_age_classifier.py b/src/age_gender_classifier/tests/test_age_classifier.py new file mode 100644 index 00000000..ff5738b7 --- /dev/null +++ b/src/age_gender_classifier/tests/test_age_classifier.py @@ -0,0 +1,110 @@ +from age_gender_classifier.server.server_onnx import ( + app, + APP_NAME, + create_transform_case_task_schema, +) +from rb.lib.common_tests import RBAppTest +from rb.api.models import AppMetadata +from pathlib import Path +from unittest.mock import patch +import json +import pandas as pd + + +class TestAgeClassifier(RBAppTest): + def setup_method(self): + self.set_app(app, APP_NAME) + + def get_metadata(self): + return AppMetadata( + name=APP_NAME, + author="UMass Rescue", + version="0.1.0", + info="Model to classify ages from images.", + plugin_name=APP_NAME, + ) + + def get_all_ml_services(self): + return [ + ( + 0, + "age_classifier", + "Age and Gender Classifier", + create_transform_case_task_schema(), + ), + ] + + @patch( + "age_gender_classifier.onnx_models.survey_models.SurveyModels.__init__", + return_value=None, + ) + @patch("age_gender_classifier.onnx_models.survey_models.SurveyModels.main_predict") + def test_api_age_classifier(self, age_class_mock, init_mock): + age_class_mock.return_value = pd.DataFrame() + + age_class_api = f"/{APP_NAME}/age_classifier" + full_path = ( + Path.cwd() + / "src" + / "age_gender_classifier" + / "age_gender_classifier" + / "onnx_models" + / "test_images" + ) + input_json = { + "inputs": { + "input_dataset": {"path": str(full_path)}, + }, + "parameters": {"age_threshold": 20}, + } + response = self.client.post(age_class_api, json=input_json) + body = response.json() + results = json.loads(body["value"]) + + assert response.status_code == 200 + assert results is not None + assert isinstance(results, dict) + + @patch( + "age_gender_classifier.onnx_models.survey_models.SurveyModels.__init__", + return_value=None, + ) + @patch("age_gender_classifier.onnx_models.survey_models.SurveyModels.main_predict") + def test_age_class_command(self, age_class_mock, init_mock): + age_class_mock.return_value = pd.DataFrame() + age_class_api = f"/{APP_NAME}/age_classifier" + full_path = ( + Path.cwd() + / "src" + / "age_gender_classifier" + / "age_gender_classifier" + / "onnx_models" + / "test_images" + ) + parameter_str = "20" + result = self.runner.invoke( + self.cli_app, [age_class_api, str(full_path), parameter_str] + ) + assert result.exit_code == 0, f"Error: {result.output}" + + @patch( + "age_gender_classifier.onnx_models.survey_models.SurveyModels.__init__", + return_value=None, + ) + @patch("age_gender_classifier.onnx_models.survey_models.SurveyModels.main_predict") + def test_bad_path(self, age_class_mock, init_mock): + age_class_mock.return_value = pd.DataFrame() + age_class_api = f"/{APP_NAME}/age_classifier" + full_path = ( + Path.cwd() + / "src" + / "age_gender_classifier" + / "age_gender_classifier" + / "onnx_models" + / "no_dir" + ) + parameter_str = "20" + result = self.runner.invoke( + self.cli_app, [age_class_api, str(full_path), parameter_str] + ) + assert result.exit_code != 0