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/data/home/wlzhang/anaconda3/envs/taxonomer/compiler_compat/ld: build/temp.linux-x86_64-2.7/src/query_db.o:/data/home/wlzhang/classfication/software/kraken2/taxonomer_0.5-0.5/taxonomer/src/load_dbs.h:42: multiple definition of `tax_to_seqs'; build/temp.linux-x86_64-2.7/scripts/cython/binner_PY.o:/data/home/wlzhang/classfication/software/kraken2/taxonomer_0.5-0.5/taxonomer/scripts/cython/../../src/load_dbs.h:42: first defined here
/data/home/wlzhang/anaconda3/envs/taxonomer/compiler_compat/ld: build/temp.linux-x86_64-2.7/src/query_db.o:/data/home/wlzhang/classfication/software/kraken2/taxonomer_0.5-0.5/taxonomer/src/load_dbs.h:41: multiple definition of `seqid_taxid_rel'; build/temp.linux-x86_64-2.7/scripts/cython/binner_PY.o:/data/home/wlzhang/classfication/software/kraken2/taxonomer_0.5-0.5/taxonomer/scripts/cython/../../src/load_dbs.h:41: first defined here
/data/home/wlzhang/anaconda3/envs/taxonomer/compiler_compat/ld: build/temp.linux-x86_64-2.7/src/kmer_utils.o:/data/home/wlzhang/classfication/software/kraken2/taxonomer_0.5-0.5/taxonomer/src/kmer_utils.h:32: multiple definition of `tax_globals'; build/temp.linux-x86_64-2.7/scripts/cython/binner_PY.o:/data/home/wlzhang/classfication/software/kraken2/taxonomer_0.5-0.5/taxonomer/scripts/cython/../../src/kmer_utils.h:32: first defined here
collect2: error: ld returned 1 exit status
error: command 'gcc' failed with exit status 1
zhang570221322
changed the title
Biopython requires Python 3.6 or later. Python 2.7 detected.
collect2: error: ld returned 1 exit status error: command 'gcc' failed with exit status
Apr 12, 2022
Python2.7 is not support for the biopython.
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