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CLAUDE.md - Basic Memory Project Guide

Project Overview

Basic Memory is a local-first knowledge management system built on the Model Context Protocol (MCP). It enables bidirectional communication between LLMs (like Claude) and markdown files, creating a personal knowledge graph that can be traversed using links between documents.

CODEBASE DEVELOPMENT

Project information

See the README.md file for a project overview.

Build and Test Commands

  • Install: just install or pip install -e ".[dev]"
  • Run tests: uv run pytest -p pytest_mock -v or just test
  • Single test: pytest tests/path/to/test_file.py::test_function_name
  • Lint: just lint or ruff check . --fix
  • Type check: just type-check or uv run pyright
  • Format: just format or uv run ruff format .
  • Run all code checks: just check (runs lint, format, type-check, test)
  • Create db migration: just migration "Your migration message"
  • Run development MCP Inspector: just run-inspector

Code Style Guidelines

  • Line length: 100 characters max
  • Python 3.12+ with full type annotations
  • Format with ruff (consistent styling)
  • Import order: standard lib, third-party, local imports
  • Naming: snake_case for functions/variables, PascalCase for classes
  • Prefer async patterns with SQLAlchemy 2.0
  • Use Pydantic v2 for data validation and schemas
  • CLI uses Typer for command structure
  • API uses FastAPI for endpoints
  • Follow the repository pattern for data access
  • Tools communicate to api routers via the httpx ASGI client (in process)
  • avoid using "private" functions in modules or classes (prepended with _)

Codebase Architecture

  • /alembic - Alembic db migrations
  • /api - FastAPI implementation of REST endpoints
  • /cli - Typer command-line interface
  • /markdown - Markdown parsing and processing
  • /mcp - Model Context Protocol server implementation
  • /models - SQLAlchemy ORM models
  • /repository - Data access layer
  • /schemas - Pydantic models for validation
  • /services - Business logic layer
  • /sync - File synchronization services

Development Notes

  • MCP tools are defined in src/basic_memory/mcp/tools/
  • MCP prompts are defined in src/basic_memory/mcp/prompts/
  • MCP tools should be atomic, composable operations
  • Use textwrap.dedent() for multi-line string formatting in prompts and tools
  • MCP Prompts are used to invoke tools and format content with instructions for an LLM
  • Schema changes require Alembic migrations
  • SQLite is used for indexing and full text search, files are source of truth
  • Testing uses pytest with asyncio support (strict mode)
  • Test database uses in-memory SQLite
  • Avoid creating mocks in tests in most circumstances.
  • Each test runs in a standalone environment with in memory SQLite and tmp_file directory
  • Do not use mocks in tests if possible. Tests run with an in memory sqlite db, so they are not needed. See fixtures in conftest.py

BASIC MEMORY PRODUCT USAGE

Knowledge Structure

  • Entity: Any concept, document, or idea represented as a markdown file
  • Observation: A categorized fact about an entity (- [category] content)
  • Relation: A directional link between entities (- relation_type [[Target]])
  • Frontmatter: YAML metadata at the top of markdown files
  • Knowledge representation follows precise markdown format:
    • Observations with [category] prefixes
    • Relations with WikiLinks [[Entity]]
    • Frontmatter with metadata

Basic Memory Commands

  • Sync knowledge: basic-memory sync or basic-memory sync --watch
  • Import from Claude: basic-memory import claude conversations
  • Import from ChatGPT: basic-memory import chatgpt
  • Import from Memory JSON: basic-memory import memory-json
  • Check sync status: basic-memory status
  • Tool access: basic-memory tools (provides CLI access to MCP tools)
    • Guide: basic-memory tools basic-memory-guide
    • Continue: basic-memory tools continue-conversation --topic="search"

MCP Capabilities

  • Basic Memory exposes these MCP tools to LLMs:

    Content Management:

    • write_note(title, content, folder, tags) - Create/update markdown notes with semantic observations and relations
    • read_note(identifier, page, page_size) - Read notes by title, permalink, or memory:// URL with knowledge graph awareness
    • read_file(path) - Read raw file content (text, images, binaries) without knowledge graph processing

    Knowledge Graph Navigation:

    • build_context(url, depth, timeframe) - Navigate the knowledge graph via memory:// URLs for conversation continuity
    • recent_activity(type, depth, timeframe) - Get recently updated information with specified timeframe (e.g., " 1d", "1 week")

    Search & Discovery:

    • search_notes(query, page, page_size) - Full-text search across all content with filtering options

    Visualization:

    • canvas(nodes, edges, title, folder) - Generate Obsidian canvas files for knowledge graph visualization

  • MCP Prompts for better AI interaction:

    • ai_assistant_guide() - Guidance on effectively using Basic Memory tools for AI assistants
    • continue_conversation(topic, timeframe) - Continue previous conversations with relevant historical context
    • search_notes(query, after_date) - Search with detailed, formatted results for better context understanding
    • recent_activity(timeframe) - View recently changed items with formatted output
    • json_canvas_spec() - Full JSON Canvas specification for Obsidian visualization

AI-Human Collaborative Development

Basic Memory emerged from and enables a new kind of development process that combines human and AI capabilities. Instead of using AI just for code generation, we've developed a true collaborative workflow:

  1. AI (LLM) writes initial implementation based on specifications and context
  2. Human reviews, runs tests, and commits code with any necessary adjustments
  3. Knowledge persists across conversations using Basic Memory's knowledge graph
  4. Development continues seamlessly across different AI sessions with consistent context
  5. Results improve through iterative collaboration and shared understanding

This approach has allowed us to tackle more complex challenges and build a more robust system than either humans or AI could achieve independently.

GitHub Integration

Basic Memory uses Claude directly into the development workflow through GitHub:

GitHub MCP Tools

Using the GitHub Model Context Protocol server, Claude can:

  • Repository Management:

    • View repository files and structure
    • Read file contents
    • Create new branches
    • Create and update files

  • Issue Management:

    • Create new issues
    • Comment on existing issues
    • Close and update issues
    • Search across issues

  • Pull Request Workflow:

    • Create pull requests
    • Review code changes
    • Add comments to PRs

This integration enables Claude to participate as a full team member in the development process, not just as a code generation tool. Claude's GitHub account (bm-claudeai) is a member of the Basic Machines organization with direct contributor access to the codebase.

Collaborative Development Process

With GitHub integration, the development workflow includes:

  1. Direct code review - Claude can analyze PRs and provide detailed feedback
  2. Contribution tracking - All of Claude's contributions are properly attributed in the Git history
  3. Branch management - Claude can create feature branches for implementations
  4. Documentation maintenance - Claude can keep documentation updated as the code evolves

With this integration, the AI assistant is a full-fledged team member rather than just a tool for generating code snippets.

Basic Memory Pro

Basic Memory Pro is a desktop GUI application that wraps the basic-memory CLI/MCP tools:

  • Built with Tauri (Rust), React (TypeScript), and a Python FastAPI sidecar
  • Provides visual knowledge graph exploration and project management
  • Uses the same core codebase but adds a desktop-friendly interface
  • Project configuration is shared between CLI and Pro versions
  • Multiple project support with visual switching interface

local repo: /Users/phernandez/dev/basicmachines/basic-memory-pro github: https://github.com/basicmachines-co/basic-memory-pro

Release and Version Management

Basic Memory uses uv-dynamic-versioning for automatic version management based on git tags:

Version Types

  • Development versions: Automatically generated from commits (e.g., 0.12.4.dev26+468a22f)
  • Beta releases: Created by tagging with beta suffixes (e.g., v0.13.0b1, v0.13.0rc1)
  • Stable releases: Created by tagging with version numbers (e.g., v0.13.0)

Release Workflows

Development Builds (Automatic)

  • Triggered on every push to main branch
  • Publishes dev versions like 0.12.4.dev26+468a22f to PyPI
  • Allows continuous testing of latest changes
  • Users install with: pip install basic-memory --pre --force-reinstall

Beta/RC Releases (Manual)

  • Create beta tag: git tag v0.13.0b1 && git push origin v0.13.0b1
  • Automatically builds and publishes to PyPI as pre-release
  • Users install with: pip install basic-memory --pre
  • Use for milestone testing before stable release

Stable Releases (Manual)

  • Create version tag: git tag v0.13.0 && git push origin v0.13.0
  • Automatically builds, creates GitHub release, and publishes to PyPI
  • Users install with: pip install basic-memory

For Development

  • No manual version bumping required
  • Versions automatically derived from git tags
  • pyproject.toml uses dynamic = ["version"]
  • __init__.py dynamically reads version from package metadata