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Test unidentified spectra with human database  #39

@ypriverol

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@ypriverol

@baimingze @XiYang-Luo :

I have created a database with 7M of previously identified spectra ftp://ftp.pride.ebi.ac.uk/pride/data/proteogenomics/projects/mslookup/human-092020/. Would be great to do an experiment for the paper as follow:

  • Take a dataset from the paper.
  • Search with MaxQuant.
  • Get a list of identified spectra and search using mslookup and the database created. Annotated all the spectra previously identified.
  • Get a list of unidentified spectra search using mslookup and the database created. Annotated all the spectra unidentified that has been previously identified in the database deposited.

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