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I have created a database with 7M of previously identified spectra ftp://ftp.pride.ebi.ac.uk/pride/data/proteogenomics/projects/mslookup/human-092020/. Would be great to do an experiment for the paper as follow:
- Take a dataset from the paper.
- Search with MaxQuant.
- Get a list of identified spectra and search using
mslookupand the database created. Annotated all the spectra previously identified. - Get a list of unidentified spectra search using
mslookupand the database created. Annotated all the spectra unidentified that has been previously identified in the database deposited.
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documentationImprovements or additions to documentationImprovements or additions to documentationenhancementNew feature or requestNew feature or request