CHANGELOG.md

rCorrSieve Change Log

Michael G. Campana, 2019-2022
Smithsonian's National Zoo & Conservation Biology Institute
Contact: [email protected]

Public domain rCorrSieve GitHub documentation updates (version = 1.6-8) are US government works.
Unmodified CorrSieve source code (versions <= 1.6-8) copyright (c) Michael G. Campana, 2010-2013

Version 1.6-9

CRAN Metadata update

Version 1.6-8 (GitHub 2019)

Updated documentation and licensing for GitHub hosting

Version 1.6-8

CRAN Metadata update

Version 1.6-7

CRAN Metadata update

Version 1.6-6

Fixed a bug in calc.delta that prevented calculations when K = 1 was not included.

Version 1.6-5

Added compatibility with INSTRUCT output.
Fixed bug in which read.struct assumed the presence of F_ST values, even in non-admixture model runs.
Fixed bug in the F_ST optimisation procedure using ordering of F_ST values.
Improved algorithm for F_ST optimisation using Q-matrix correlations.

Version 1.6-4

Corrected bug which prevented rows-and-columns Q-matrix correlations from being calculated when only two runs were completed per K.
Corrected bug which prevented the performance of Q-matrix correlations when the number of runs per K varied between K values or where the minimum tested K value was not 1.
Corrected bug which prevented the calculation of the average maximum correlation when the number of runs for individual K values was 0.

Version 1.6-3

Corrected minor bug in testing algorithm for continuous data
Corrected minor bug in setting default file location
Documentation corrections

Version 1.6-2

Added 2 methods to optimise the standard deviation calculation.

Version 1.6-1

Translated original Ruby program to R.

Versions < 1.6-1

Only available in Ruby implementation (rubyCorrSieve)