Add cloud-rt (hywater) (#113)

- fix MPI free problem in exchanger
- call rt in pgen
- tempf in rt does not depend on ghost cell values

Author: chengcli

cmake/hywater.cmake

@@ -14,7 +14,8 @@ set(NVAPOR 1)
 set(NCLOUD 2)
 set(NPHASE_LEGACY 3)
 set(NETCDF ON)
-# set(PNETCDF ON) set(MPI ON)
+set(PNETCDF ON)
+set(MPI ON)
 set(DISORT ON)
 set(PYTHON_BINDINGS ON)
 set(TASKLIST ImplicitHydroTasks)

examples/2024-XZhang-cloud-rt/CMakeLists.txt

@@ -0,0 +1,11 @@
+
+# 1. Compile hywater
+if (${NVAPOR} EQUAL 1 AND ${NCLOUD} EQUAL 2 AND ${NPHASE_LEGACY} EQUAL 3)
+  setup_problem(hywater)
+endif()
+
+# 2. Copy input files to run directory
+file(GLOB inputs *.inp *.yaml)
+foreach(input ${inputs})
+    file(COPY ${input} DESTINATION ${CMAKE_BINARY_DIR}/bin)
+endforeach()