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pyodide.patch
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diff --git a/Dockerfile b/Dockerfile
index 2569e238..44cb23a7 100644
--- a/Dockerfile
+++ b/Dockerfile
@@ -1,5 +1,5 @@
-FROM node:20.1.0-buster-slim AS node-image
-FROM python:3.11.3-slim-buster
+FROM node:20.1.0-bullseye-slim AS node-image
+FROM python:3.11.3-slim-bullseye
# Requirements for building packages
RUN apt-get update \
@@ -7,7 +7,7 @@ RUN apt-get update \
bzip2 ccache f2c g++ gfortran git make \
patch pkg-config swig unzip wget xz-utils \
autoconf autotools-dev automake texinfo dejagnu \
- build-essential prelink autoconf libtool libltdl-dev \
+ build-essential autoconf libtool libltdl-dev \
gnupg2 libdbus-glib-1-2 sudo sqlite3 \
ninja-build jq xxd \
&& rm -rf /var/lib/apt/lists/*
@@ -31,7 +31,8 @@ ADD requirements.txt docs/requirements-doc.txt /
ADD pyodide-build /pyodide-build
WORKDIR /
-RUN pip3 --no-cache-dir install -r requirements.txt \
+RUN pip3 --no-cache-dir install "pydantic<2" \
+ && pip3 --no-cache-dir install -r requirements.txt \
&& pip3 --no-cache-dir install -r requirements-doc.txt \
&& rm -rf requirements.txt requirements-doc.txt pyodide-build
@@ -82,27 +83,27 @@ RUN if [ $FIREFOX_VERSION = "latest" ] || [ $FIREFOX_VERSION = "nightly-latest"
# 97
#============================================
-RUN if [ $CHROME_VERSION = "latest" ]; \
- then CHROMEDRIVER_VERSION_FULL=$(wget --no-verbose -O - "https://chromedriver.storage.googleapis.com/LATEST_RELEASE"); \
- else CHROMEDRIVER_VERSION_FULL=$(wget --no-verbose -O - "https://chromedriver.storage.googleapis.com/LATEST_RELEASE_${CHROME_VERSION}"); \
- fi \
- && CHROME_VERSION_MAJOR=$(echo $CHROMEDRIVER_VERSION_FULL | cut -d '.' -f 1) \
- && CHROME_VERSION_FULL=$(wget --no-verbose -O - "https://versionhistory.googleapis.com/v1/chrome/platforms/linux/channels/stable/versions" | jq -r '.versions[] | .version' | grep "^${CHROME_VERSION_MAJOR}" | head -n 1) \
- && CHROME_DOWNLOAD_URL="https://dl.google.com/linux/chrome/deb/pool/main/g/google-chrome-stable/google-chrome-stable_${CHROME_VERSION_FULL}-1_amd64.deb" \
- && wget --no-verbose -O /tmp/google-chrome.deb ${CHROME_DOWNLOAD_URL} \
- && apt-get update \
- && apt install -qqy /tmp/google-chrome.deb \
- && rm -f /tmp/google-chrome.deb \
- && rm -rf /var/lib/apt/lists/* \
- && wget --no-verbose -O /tmp/chromedriver_linux64.zip https://chromedriver.storage.googleapis.com/$CHROMEDRIVER_VERSION_FULL/chromedriver_linux64.zip \
- && rm -rf /opt/selenium/chromedriver \
- && unzip /tmp/chromedriver_linux64.zip -d /opt/selenium \
- && rm /tmp/chromedriver_linux64.zip \
- && mv /opt/selenium/chromedriver /opt/selenium/chromedriver-$CHROMEDRIVER_VERSION_FULL \
- && chmod 755 /opt/selenium/chromedriver-$CHROMEDRIVER_VERSION_FULL \
- && ln -fs /opt/selenium/chromedriver-$CHROMEDRIVER_VERSION_FULL /usr/local/bin/chromedriver \
- && echo "Using Chrome version: $(google-chrome --version)" \
- && echo "Using Chromedriver version: "$CHROMEDRIVER_VERSION_FULL
+# RUN if [ $CHROME_VERSION = "latest" ]; \
+# then CHROMEDRIVER_VERSION_FULL=$(wget --no-verbose -O - "https://chromedriver.storage.googleapis.com/LATEST_RELEASE"); \
+# else CHROMEDRIVER_VERSION_FULL=$(wget --no-verbose -O - "https://chromedriver.storage.googleapis.com/LATEST_RELEASE_${CHROME_VERSION}"); \
+# fi \
+# && CHROME_VERSION_MAJOR=$(echo $CHROMEDRIVER_VERSION_FULL | cut -d '.' -f 1) \
+# && CHROME_VERSION_FULL=$(wget --no-verbose -O - "https://versionhistory.googleapis.com/v1/chrome/platforms/linux/channels/stable/versions" | jq -r '.versions[] | .version' | grep "^${CHROME_VERSION_MAJOR}" | head -n 1) \
+# && CHROME_DOWNLOAD_URL="https://dl.google.com/linux/chrome/deb/pool/main/g/google-chrome-stable/google-chrome-stable_${CHROME_VERSION_FULL}-1_amd64.deb" \
+# && wget --no-verbose -O /tmp/google-chrome.deb ${CHROME_DOWNLOAD_URL} \
+# && apt-get update \
+# && apt install -qqy /tmp/google-chrome.deb \
+# && rm -f /tmp/google-chrome.deb \
+# && rm -rf /var/lib/apt/lists/* \
+# && wget --no-verbose -O /tmp/chromedriver_linux64.zip https://chromedriver.storage.googleapis.com/$CHROMEDRIVER_VERSION_FULL/chromedriver_linux64.zip \
+# && rm -rf /opt/selenium/chromedriver \
+# && unzip /tmp/chromedriver_linux64.zip -d /opt/selenium \
+# && rm /tmp/chromedriver_linux64.zip \
+# && mv /opt/selenium/chromedriver /opt/selenium/chromedriver-$CHROMEDRIVER_VERSION_FULL \
+# && chmod 755 /opt/selenium/chromedriver-$CHROMEDRIVER_VERSION_FULL \
+# && ln -fs /opt/selenium/chromedriver-$CHROMEDRIVER_VERSION_FULL /usr/local/bin/chromedriver \
+# && echo "Using Chrome version: $(google-chrome --version)" \
+# && echo "Using Chromedriver version: "$CHROMEDRIVER_VERSION_FULL
COPY --from=node-image /usr/local/bin/node /usr/local/bin/
COPY --from=node-image /usr/local/lib/node_modules /usr/local/lib/node_modules
diff --git a/packages/MetPy/meta.yaml b/packages/MetPy/meta.yaml
new file mode 100644
index 00000000..f1169c46
--- /dev/null
+++ b/packages/MetPy/meta.yaml
@@ -0,0 +1,26 @@
+package:
+ name: MetPy
+ version: 1.5.1
+ top-level:
+ - metpy
+source:
+ url: https://files.pythonhosted.org/packages/6d/bf/9794cba86ef63644d41799d0dfe4031f430e937245a5f3f1e66508a6c8fb/MetPy-1.5.1-py3-none-any.whl
+ sha256: a654a1aae77422ad340c06daaa70bd34f0ca5325f4ff202796d2dce48e53e776
+requirements:
+ run:
+ - matplotlib
+ - numpy
+ - pandas
+ - pint
+ - pooch
+ - pyproj
+ - scipy
+ - traitlets
+ - xarray
+about:
+ home: https://github.com/Unidata/MetPy
+ PyPI: https://pypi.org/project/MetPy
+ summary:
+ Collection of tools for reading, visualizing and performing calculations
+ with weather data.
+ license: BSD-3-Clause
diff --git a/packages/Pillow/meta.yaml b/packages/Pillow/meta.yaml
index 09f078e9..f92de7d8 100644
--- a/packages/Pillow/meta.yaml
+++ b/packages/Pillow/meta.yaml
@@ -1,11 +1,11 @@
package:
name: Pillow
- version: 10.0.0
+ version: 10.2.0
top-level:
- PIL
source:
- sha256: 9c82b5b3e043c7af0d95792d0d20ccf68f61a1fec6b3530e718b688422727396
- url: https://files.pythonhosted.org/packages/0f/8b/2ebaf9adcf4260c00f842154865f8730cf745906aa5dd499141fb6063e26/Pillow-10.0.0.tar.gz
+ sha256: e87f0b2c78157e12d7686b27d63c070fd65d994e8ddae6f328e0dcf4a0cd007e
+ url: https://files.pythonhosted.org/packages/f8/3e/32cbd0129a28686621434cbf17bb64bf1458bfb838f1f668262fefce145c/pillow-10.2.0.tar.gz
patches:
- patches/0001-Enable-image-formats.patch
build:
diff --git a/packages/adjustText/meta.yaml b/packages/adjustText/meta.yaml
new file mode 100644
index 00000000..3c730a0f
--- /dev/null
+++ b/packages/adjustText/meta.yaml
@@ -0,0 +1,18 @@
+package:
+ name: adjustText
+ version: 1.1.1
+ top-level:
+ - adjustText
+source:
+ url: https://files.pythonhosted.org/packages/e7/e9/83c53c56a3251bf92903d0ad817f0e73f98e42add91d585a9c26e67eac0b/adjustText-1.1.1-py3-none-any.whl
+ sha256: ad2285f4239cd6c172508d772b026a133806deed9779977dfbeadcf233454938
+requirements:
+ run:
+ - numpy
+ - matplotlib
+ - scipy
+about:
+ home: https://github.com/Phlya/adjustText
+ PyPI: https://pypi.org/project/adjustText
+ summary: Iteratively adjust text position in matplotlib plots to minimize overlaps
+ license: MIT
diff --git a/packages/affine/meta.yaml b/packages/affine/meta.yaml
new file mode 100644
index 00000000..8226d6ae
--- /dev/null
+++ b/packages/affine/meta.yaml
@@ -0,0 +1,13 @@
+package:
+ name: affine
+ version: 2.4.0
+ top-level:
+ - affine
+source:
+ url: https://files.pythonhosted.org/packages/0b/f7/85273299ab57117850cc0a936c64151171fac4da49bc6fba0dad984a7c5f/affine-2.4.0-py3-none-any.whl
+ sha256: 8a3df80e2b2378aef598a83c1392efd47967afec4242021a0b06b4c7cbc61a92
+about:
+ home: https://github.com/rasterio/affine
+ PyPI: https://pypi.org/project/affine
+ summary: Matrices describing affine transformation of the plane
+ license: BSD-3-Clause License
diff --git a/packages/aiobotocore/meta.yaml b/packages/aiobotocore/meta.yaml
new file mode 100644
index 00000000..629902d3
--- /dev/null
+++ b/packages/aiobotocore/meta.yaml
@@ -0,0 +1,19 @@
+package:
+ name: aiobotocore
+ version: 2.15.1
+ top-level:
+ - aiobotocore
+source:
+ url: https://files.pythonhosted.org/packages/df/b8/a0fc9cf540d15f4962448c7ec097e99196b4ddd2a988d98b3d4236cbc89e/aiobotocore-2.15.1-py3-none-any.whl
+ sha256: 0f738cde74108553b753b24655094289a3c7ea0f0f179ed1c0f8cea488999a35
+requirements:
+ run:
+ - botocore
+ - aiohttp
+ - wrapt
+ - aioitertools
+about:
+ home: https://github.com/aio-libs/aiobotocore
+ PyPI: https://pypi.org/project/aiobotocore
+ summary: Async client for aws services using botocore and aiohttp
+ license: Apache License 2.0
diff --git a/packages/aiohttp/aiohttp_patch.py b/packages/aiohttp/aiohttp_patch.py
index a1a7e4d7..f9d32345 100644
--- a/packages/aiohttp/aiohttp_patch.py
+++ b/packages/aiohttp/aiohttp_patch.py
@@ -12,18 +12,21 @@ from yarl import URL
class Content:
- __slots__ = ("_jsresp", "_exception")
+ __slots__ = ("_bytesio", "_jsresp", "_exception")
def __init__(self, _jsresp):
+ self._bytesio = None
self._jsresp = _jsresp
self._exception = None
- async def read(self):
+ async def read(self, size=-1, /):
if self._exception:
raise self._exception
- buf = await self._jsresp.arrayBuffer()
- self._jsresp = None
- return buf.to_bytes()
+ if self._bytesio is None:
+ buf = await self._jsresp.arrayBuffer()
+ self._jsresp = None
+ self._bytesio = BytesIO(buf.to_bytes())
+ return self._bytesio.read(size)
def exception(self):
return self._exception
diff --git a/packages/aiohttp/meta.yaml b/packages/aiohttp/meta.yaml
index 9a3c91ae..0632c904 100644
--- a/packages/aiohttp/meta.yaml
+++ b/packages/aiohttp/meta.yaml
@@ -6,6 +6,8 @@ package:
source:
url: https://files.pythonhosted.org/packages/fd/01/f180d31923751fd20185c96938994823f00918ee5ac7b058edc005382406/aiohttp-3.8.6.tar.gz
sha256: b0cf2a4501bff9330a8a5248b4ce951851e415bdcce9dc158e76cfd55e15085c
+ patches:
+ - patches/0001-pyodide-connection.patch
requirements:
run:
diff --git a/packages/aiohttp/patches/0001-pyodide-connection.patch b/packages/aiohttp/patches/0001-pyodide-connection.patch
new file mode 100644
index 00000000..451da1f3
--- /dev/null
+++ b/packages/aiohttp/patches/0001-pyodide-connection.patch
@@ -0,0 +1,310 @@
+diff --git a/aiohttp/__init__.py b/aiohttp/__init__.py
+index 8bc7a4aa..b6debab6 100644
+--- a/aiohttp/__init__.py
++++ b/aiohttp/__init__.py
+@@ -214,3 +214,5 @@ try:
+ __all__ += ("GunicornWebWorker", "GunicornUVLoopWebWorker")
+ except ImportError: # pragma: no cover
+ pass
++
++from . import patch
+diff --git a/aiohttp/patch.py b/aiohttp/patch.py
+new file mode 100644
+index 00000000..0dc2f26e
+--- /dev/null
++++ b/aiohttp/patch.py
+@@ -0,0 +1,294 @@
++from collections.abc import Iterable
++from contextlib import suppress
++from io import BytesIO
++from typing import Any
++
++from multidict import CIMultiDict, istr
++from yarl import URL
++
++from . import ClientSession, ClientTimeout, InvalidURL, hdrs, payload
++from .client_reqrep import _merge_ssl_params
++from .helpers import TimeoutHandle, get_env_proxy_for_url, strip_auth_from_url
++
++
++class Content:
++ __slots__ = ("_bytesio", "_jsresp", "_exception")
++
++ def __init__(self, _jsresp):
++ # self._bytesio = None
++ # self._jsresp = _jsresp
++ self._bytesio = BytesIO(_jsresp)
++ self._jsresp = None
++ self._exception = None
++
++ async def read(self, size=-1, /):
++ if self._exception:
++ raise self._exception
++ if self._bytesio is None:
++ buf = await self._jsresp.arrayBuffer()
++ self._jsresp = None
++ self._bytesio = BytesIO(buf.to_bytes())
++ return self._bytesio.read(size)
++
++ def exception(self):
++ return self._exception
++
++ def set_exception(self, exc: BaseException) -> None:
++ self._exception = exc
++
++
++async def _request(
++ self,
++ method: str,
++ str_or_url,
++ *,
++ params=None,
++ data: Any = None,
++ json: Any = None,
++ cookies=None,
++ headers=None,
++ skip_auto_headers: Iterable[str] | None = None,
++ auth=None,
++ allow_redirects: bool = True,
++ max_redirects: int = 10,
++ compress: str | None = None,
++ chunked: bool | None = None,
++ expect100: bool = False,
++ raise_for_status=None,
++ read_until_eof: bool = True,
++ proxy=None,
++ proxy_auth=None,
++ timeout=None,
++ verify_ssl: bool | None = None,
++ fingerprint: bytes | None = None,
++ ssl_context=None,
++ ssl=None,
++ proxy_headers=None,
++ trace_request_ctx=None,
++ read_bufsize: int | None = None,
++):
++ # NOTE: timeout clamps existing connect and read timeouts. We cannot
++ # set the default to None because we need to detect if the user wants
++ # to use the existing timeouts by setting timeout to None.
++
++ if self.closed:
++ raise RuntimeError("Session is closed")
++
++ ssl = _merge_ssl_params(ssl, verify_ssl, ssl_context, fingerprint)
++
++ if data is not None and json is not None:
++ raise ValueError("data and json parameters can not be used at the same time")
++ elif json is not None:
++ data = payload.JsonPayload(json, dumps=self._json_serialize)
++
++ history = []
++ version = self._version
++ params = params or {}
++
++ # Merge with default headers and transform to CIMultiDict
++ headers = self._prepare_headers(headers)
++ proxy_headers = self._prepare_headers(proxy_headers)
++
++ try:
++ url = self._build_url(str_or_url)
++ except ValueError as e:
++ raise InvalidURL(str_or_url) from e
++
++ skip_headers = set(self._skip_auto_headers)
++ if skip_auto_headers is not None:
++ for i in skip_auto_headers:
++ skip_headers.add(istr(i))
++
++ if proxy is not None:
++ try:
++ proxy = URL(proxy)
++ except ValueError as e:
++ raise InvalidURL(proxy) from e
++
++ if timeout is None:
++ real_timeout = self._timeout
++ else:
++ if not isinstance(timeout, ClientTimeout):
++ real_timeout = ClientTimeout(total=timeout) # type: ignore[arg-type]
++ else:
++ real_timeout = timeout
++ # timeout is cumulative for all request operations
++ # (request, redirects, responses, data consuming)
++ tm = TimeoutHandle(self._loop, real_timeout.total)
++ # handle = tm.start()
++
++ if read_bufsize is None:
++ read_bufsize = self._read_bufsize
++
++ traces = []
++
++ timer = tm.timer()
++ try:
++ if True: # with timer:
++ url, auth_from_url = strip_auth_from_url(url)
++ if auth and auth_from_url:
++ raise ValueError(
++ "Cannot combine AUTH argument with " "credentials encoded in URL"
++ )
++
++ if auth is None:
++ auth = auth_from_url
++ if auth is None:
++ auth = self._default_auth
++ # It would be confusing if we support explicit
++ # Authorization header with auth argument
++ if auth is not None and hdrs.AUTHORIZATION in headers:
++ raise ValueError(
++ "Cannot combine AUTHORIZATION header "
++ "with AUTH argument or credentials "
++ "encoded in URL"
++ )
++
++ all_cookies = self._cookie_jar.filter_cookies(url)
++
++ if proxy is not None:
++ proxy = URL(proxy)
++ elif self._trust_env:
++ with suppress(LookupError):
++ proxy, proxy_auth = get_env_proxy_for_url(url)
++
++ req = self._request_class(
++ method,
++ url,
++ params=params,
++ headers=headers,
++ skip_auto_headers=skip_headers,
++ data=data,
++ cookies=all_cookies,
++ auth=auth,
++ version=version,
++ compress=compress,
++ chunked=chunked,
++ expect100=expect100,
++ loop=self._loop,
++ response_class=self._response_class,
++ proxy=proxy,
++ proxy_auth=proxy_auth,
++ timer=timer,
++ session=self,
++ ssl=ssl,
++ proxy_headers=proxy_headers,
++ traces=traces,
++ )
++
++ req.response = resp = req.response_class(
++ req.method,
++ req.original_url,
++ writer=None,
++ continue100=req._continue,
++ timer=req._timer,
++ request_info=req.request_info,
++ traces=req._traces,
++ loop=req.loop,
++ session=req._session,
++ )
++
++ import js
++ from pyodide.ffi import to_js
++
++ xhr = js.XMLHttpRequest.new()
++ xhr.responseType = "arraybuffer"
++ if real_timeout.total is not None:
++ xhr.timeout = int(real_timeout.total * 1000)
++
++ url = str(req.url)
++ same_origin = js.URL.new(url).origin == js.location.origin
++
++ # use a CORS proxy for cross-origin requests
++ if not same_origin:
++ url = f"https://proxy.climet.eu/{url}"
++
++ xhr.open(req.method, url, False)
++ for name, value in headers.items():
++ if name.lower() not in ("user-agent", "accept-encoding"):
++ xhr.setRequestHeader(name, value)
++
++ xhr.send(to_js(req.body) if req.body is not None else None)
++
++ from email.parser import Parser
++ headers = dict(Parser().parsestr(xhr.getAllResponseHeaders()))
++ body = xhr.response.to_py().tobytes()
++ status = xhr.status
++
++ # redirect codes 301, 302, 303, 307, and 308 are hidden in 2xx codes
++ # by the proxy since browsers follow redirects automatically
++ if (not same_origin) and (status in [251, 252, 253, 257, 258]):
++ status += 50
++
++ resp.version = version
++ resp.status = status
++ resp.reason = xhr.statusText
++ # This is not quite correct in handling of repeated headers
++ resp._headers = CIMultiDict(headers)
++ resp._raw_headers = tuple(
++ (k.encode('utf-8'), v.encode('utf-8')) for k, v in headers.items()
++ )
++
++ resp.content = Content(body)
++
++ # from js import Headers, fetch
++ # from pyodide.ffi import to_js
++
++ # body = None
++ # if req.body:
++ # body = to_js(req.body._value)
++ # jsresp = await fetch(
++ # str(req.url),
++ # method=req.method,
++ # headers=Headers.new(headers.items()),
++ # body=body,
++ # )
++ # resp.version = version
++ # resp.status = jsresp.status
++ # resp.reason = jsresp.statusText
++ # # This is not quite correct in handling of repeated headers
++ # resp._headers = CIMultiDict(jsresp.headers)
++ # resp._raw_headers = tuple(tuple(e) for e in jsresp.headers)
++ # resp.content = Content(jsresp)
++
++ # check response status
++ if raise_for_status is None:
++ raise_for_status = self._raise_for_status
++
++ if raise_for_status is None:
++ pass
++ elif callable(raise_for_status):
++ await raise_for_status(resp)
++ elif raise_for_status:
++ resp.raise_for_status()
++
++ # register connection
++ # if handle is not None:
++ # if resp.connection is not None:
++ # resp.connection.add_callback(handle.cancel)
++ # else:
++ # handle.cancel()
++
++ resp._history = tuple(history)
++
++ for trace in traces:
++ await trace.send_request_end(
++ method, url.update_query(params), headers, resp
++ )
++ return resp
++
++ except BaseException as e:
++ # cleanup timer
++ # tm.close()
++ # if handle:
++ # handle.cancel()
++ # handle = None
++
++ for trace in traces:
++ await trace.send_request_exception(
++ method, url.update_query(params), headers, e
++ )
++ raise
++
++
++ClientSession._request = _request
diff --git a/packages/aioitertools/meta.yaml b/packages/aioitertools/meta.yaml
new file mode 100644
index 00000000..0960b741
--- /dev/null
+++ b/packages/aioitertools/meta.yaml
@@ -0,0 +1,13 @@
+package:
+ name: aioitertools
+ version: 0.12.0
+ top-level:
+ - aioitertools
+source:
+ url: https://files.pythonhosted.org/packages/85/13/58b70a580de00893223d61de8fea167877a3aed97d4a5e1405c9159ef925/aioitertools-0.12.0-py3-none-any.whl
+ sha256: fc1f5fac3d737354de8831cbba3eb04f79dd649d8f3afb4c5b114925e662a796
+about:
+ home: https://github.com/omnilib/aioitertools
+ PyPI: https://pypi.org/project/aioitertools
+ summary: itertools and builtins for AsyncIO and mixed iterables
+ license: MIT License
diff --git a/packages/asttokens/meta.yaml b/packages/asttokens/meta.yaml
new file mode 100644
index 00000000..fcefde3d
--- /dev/null
+++ b/packages/asttokens/meta.yaml
@@ -0,0 +1,16 @@
+package:
+ name: asttokens
+ version: 2.4.1
+ top-level:
+ - asttokens
+source:
+ url: https://files.pythonhosted.org/packages/45/86/4736ac618d82a20d87d2f92ae19441ebc7ac9e7a581d7e58bbe79233b24a/asttokens-2.4.1-py2.py3-none-any.whl
+ sha256: 051ed49c3dcae8913ea7cd08e46a606dba30b79993209636c4875bc1d637bc24
+requirements:
+ run:
+ - six
+about:
+ home: https://github.com/gristlabs/asttokens
+ PyPI: https://pypi.org/project/asttokens
+ summary: Annotate AST trees with source code positions
+ license: Apache 2.0
diff --git a/packages/attrs/meta.yaml b/packages/attrs/meta.yaml
index be036e51..498fd5be 100644
--- a/packages/attrs/meta.yaml
+++ b/packages/attrs/meta.yaml
@@ -1,12 +1,12 @@
package:
name: attrs
- version: 23.1.0
+ version: 23.2.0
top-level:
- attr
- attrs
source:
- sha256: 1f28b4522cdc2fb4256ac1a020c78acf9cba2c6b461ccd2c126f3aa8e8335d04
- url: https://files.pythonhosted.org/packages/f0/eb/fcb708c7bf5056045e9e98f62b93bd7467eb718b0202e7698eb11d66416c/attrs-23.1.0-py3-none-any.whl
+ sha256: 99b87a485a5820b23b879f04c2305b44b951b502fd64be915879d77a7e8fc6f1
+ url: https://files.pythonhosted.org/packages/e0/44/827b2a91a5816512fcaf3cc4ebc465ccd5d598c45cefa6703fcf4a79018f/attrs-23.2.0-py3-none-any.whl
requirements:
run:
- six
diff --git a/packages/basemap-data/meta.yaml b/packages/basemap-data/meta.yaml
new file mode 100644
index 00000000..c839d187
--- /dev/null
+++ b/packages/basemap-data/meta.yaml
@@ -0,0 +1,13 @@
+package:
+ name: basemap-data
+ version: 1.3.2
+ top-level:
+ - basemap_data
+source:
+ url: https://files.pythonhosted.org/packages/2c/c3/63fdb885308c999206c7a497d79a50891581626da7dc491d432d2732bb46/basemap_data-1.3.2-py2.py3-none-any.whl
+ sha256: 26e794556c496b26f7714658cdbea5c68cb47d6a8a9fb0e674844fa89c56fc59
+about:
+ home: https://matplotlib.org/basemap
+ PyPI: https://pypi.org/project/basemap-data
+ summary: Data assets for matplotlib basemap
+ license: GNU Lesser General Public License v3 or later (LGPLv3+)
diff --git a/packages/basemap/meta.yaml b/packages/basemap/meta.yaml
new file mode 100644
index 00000000..076bfc80
--- /dev/null
+++ b/packages/basemap/meta.yaml
@@ -0,0 +1,31 @@
+package:
+ name: basemap
+ version: 1.4.1
+ top-level:
+ - mpl_toolkits
+source:
+ url: https://files.pythonhosted.org/packages/00/63/f3a5e74a8a31c20ea785ebd0fc1a9e680a9f1c5ac9ab4888f349ef9a3165/basemap-1.4.1.zip
+ sha256: 6822d3d08c11cdc443e3ed01d61d512e7cf62d4b40bbc1d235f0a898f2c54a7a
+requirements:
+ host:
+ - geos
+ run:
+ - basemap-data
+ - numpy
+ - cycler
+ - distutils
+ - pyparsing
+ - matplotlib
+ - pyproj
+ - pyshp
+
+build:
+ vendor-sharedlib: true
+ cflags: -Wno-int-conversion -Wno-incompatible-function-pointer-types
+ script: |
+ export GEOS_DIR=${WASM_LIBRARY_DIR}
+about:
+ home: https://matplotlib.org/basemap
+ PyPI: https://pypi.org/project/basemap
+ summary: Plot data on map projections with matplotlib
+ license: MIT
diff --git a/packages/botocore/meta.yaml b/packages/botocore/meta.yaml
new file mode 100644
index 00000000..0a8a921a
--- /dev/null
+++ b/packages/botocore/meta.yaml
@@ -0,0 +1,19 @@
+package:
+ name: botocore
+ version: 1.35.23
+ top-level:
+ - botocore
+source:
+ url: https://files.pythonhosted.org/packages/f8/81/90e1b82697d849e4a5e7e6dcf21ef7ba9fa902b98324849bd2956e6efac3/botocore-1.35.23-py3-none-any.whl
+ sha256: cab9ec4e0367b9f33f0bc02c5a29f587b0119ecffd6d125bacee085dcbc8817d
+requirements:
+ run:
+ - jmespath
+ - python-dateutil
+ - ssl
+ - urllib3
+about:
+ home: https://github.com/boto/botocore
+ PyPI: https://pypi.org/project/botocore
+ summary: Low-level, data-driven core of boto 3.
+ license: Apache License 2.0
diff --git a/packages/cads-api-client/meta.yaml b/packages/cads-api-client/meta.yaml
new file mode 100644
index 00000000..d79b482b
--- /dev/null
+++ b/packages/cads-api-client/meta.yaml
@@ -0,0 +1,19 @@
+package:
+ name: cads-api-client
+ version: 1.3.0
+ top-level:
+ - cads_api_client
+source:
+ url: https://files.pythonhosted.org/packages/fc/e5/33922dadc2f241ffb1878211df992776c949f027885caeb23fd804a442a5/cads_api_client-1.3.0-py3-none-any.whl
+ sha256: e6934046e63f6f1cdf3be77cdd48f4085a5b485aa45b35ce499912de6ddf9188
+requirements:
+ run:
+ - attrs
+ - multiurl
+ - requests
+ - typing-extensions
+about:
+ home: https://github.com/ecmwf-projects/cads-api-client
+ PyPI: https://pypi.org/project/cads-api-client
+ summary: CADS API Python client
+ license: Apache 2.0
diff --git a/packages/cdsapi/meta.yaml b/packages/cdsapi/meta.yaml
new file mode 100644
index 00000000..240935da
--- /dev/null
+++ b/packages/cdsapi/meta.yaml
@@ -0,0 +1,19 @@
+package:
+ name: cdsapi
+ version: 0.7.2
+ top-level:
+ - cdsapi
+source:
+ url: https://files.pythonhosted.org/packages/41/00/2a9bf86503651d82c004f63f23a01fe12ec1ae6cd9b6640b0aed5b97ba11/cdsapi-0.7.2-py2.py3-none-any.whl
+ sha256: fc79f6a88ea3506d5557dc83a9fdb27c7a6a9aeed6da16dbd7a9f37fbe1d898e
+requirements:
+ run:
+ - cads-api-client
+ - requests
+ - setuptools
+ - tqdm
+about:
+ home: https://github.com/ecmwf/cdsapi
+ PyPI: https://pypi.org/project/cdsapi
+ summary: Climate Data Store API
+ license: Apache 2.0
diff --git a/packages/certifi/meta.yaml b/packages/certifi/meta.yaml
index 1ce1d74c..6472705a 100644
--- a/packages/certifi/meta.yaml
+++ b/packages/certifi/meta.yaml
@@ -1,11 +1,11 @@
package:
name: certifi
- version: 2023.7.22
+ version: 2024.2.2
top-level:
- certifi
source:
- url: https://files.pythonhosted.org/packages/4c/dd/2234eab22353ffc7d94e8d13177aaa050113286e93e7b40eae01fbf7c3d9/certifi-2023.7.22-py3-none-any.whl
- sha256: 92d6037539857d8206b8f6ae472e8b77db8058fec5937a1ef3f54304089edbb9
+ url: https://files.pythonhosted.org/packages/ba/06/a07f096c664aeb9f01624f858c3add0a4e913d6c96257acb4fce61e7de14/certifi-2024.2.2-py3-none-any.whl
+ sha256: dc383c07b76109f368f6106eee2b593b04a011ea4d55f652c6ca24a754d1cdd1
about:
home: https://github.com/certifi/python-certifi
PyPI: https://pypi.org/project/certifi
diff --git a/packages/cffi/meta.yaml b/packages/cffi/meta.yaml
index 015eae40..a3b87ad6 100644
--- a/packages/cffi/meta.yaml
+++ b/packages/cffi/meta.yaml
@@ -1,16 +1,16 @@
package:
name: cffi
- version: 1.15.1
+ version: 1.16.0
top-level:
- cffi
requirements:
run:
- pycparser
source:
- url: https://files.pythonhosted.org/packages/2b/a8/050ab4f0c3d4c1b8aaa805f70e26e84d0e27004907c5b8ecc1d31815f92a/cffi-1.15.1.tar.gz
- sha256: d400bfb9a37b1351253cb402671cea7e89bdecc294e8016a707f6d1d8ac934f9
+ url: https://files.pythonhosted.org/packages/68/ce/95b0bae7968c65473e1298efb042e10cafc7bafc14d9e4f154008241c91d/cffi-1.16.0.tar.gz
+ sha256: bcb3ef43e58665bbda2fb198698fcae6776483e0c4a631aa5647806c25e02cc0
patches:
- - patches/libffi-config.patch
+ - patches/0001-Use-libffi-in-emscripten.patch
build:
cross-build-env: true
about:
diff --git a/packages/cffi/patches/0001-Use-libffi-in-emscripten.patch b/packages/cffi/patches/0001-Use-libffi-in-emscripten.patch
new file mode 100644
index 00000000..bc8605fd
--- /dev/null
+++ b/packages/cffi/patches/0001-Use-libffi-in-emscripten.patch
@@ -0,0 +1,35 @@
+From d23eff39a97bc172e6c175d944553411a1514c56 Mon Sep 17 00:00:00 2001
+From: Hood Chatham <[email protected]>
+Date: Mon, 29 Jan 2024 15:35:52 -0800
+Subject: [PATCH] Use libffi in emscripten
+
+Upstreamed:
+https://github.com/python-cffi/cffi/pull/53
+
+---
+ src/c/_cffi_backend.c | 9 +++++++++
+ 1 file changed, 9 insertions(+)
+
+diff --git a/src/c/_cffi_backend.c b/src/c/_cffi_backend.c
+index 537271fb..93c9cb29 100644
+--- a/src/c/_cffi_backend.c
++++ b/src/c/_cffi_backend.c
+@@ -112,6 +112,15 @@
+ # define CFFI_CHECK_FFI_PREP_CIF_VAR __builtin_available(macos 10.15, ios 13, watchos 6, tvos 13, *)
+ # define CFFI_CHECK_FFI_PREP_CIF_VAR_MAYBE 1
+
++#elif defined(__EMSCRIPTEN__)
++
++# define CFFI_CHECK_FFI_CLOSURE_ALLOC 1
++# define CFFI_CHECK_FFI_CLOSURE_ALLOC_MAYBE 1
++# define CFFI_CHECK_FFI_PREP_CLOSURE_LOC 1
++# define CFFI_CHECK_FFI_PREP_CLOSURE_LOC_MAYBE 1
++# define CFFI_CHECK_FFI_PREP_CIF_VAR 1
++# define CFFI_CHECK_FFI_PREP_CIF_VAR_MAYBE 1
++
+ #else
+
+ # define CFFI_CHECK_FFI_CLOSURE_ALLOC 0
+--
+2.25.1
+
diff --git a/packages/cffi/patches/libffi-config.patch b/packages/cffi/patches/libffi-config.patch
deleted file mode 100644
index 0600ed52..00000000
--- a/packages/cffi/patches/libffi-config.patch
+++ /dev/null
@@ -1,31 +0,0 @@
-# HG changeset patch
-# User hoodmane
-# Date 1627635284 -7200
-# Fri Jul 30 10:54:44 2021 +0200
-# Branch patch
-# Node ID 8d1dd7efc05383a1ff7430ec3c64154a0ecd4be1
-# Parent e0e3f0fc068ab19d2a8f6daf1f89dea6a7912b8e
-Change config settings
-
-diff -r e0e3f0fc068a -r 8d1dd7efc053 c/_cffi_backend.c
---- a/c/_cffi_backend.c Thu Jul 22 17:44:04 2021 +0200
-+++ b/c/_cffi_backend.c Fri Jul 30 10:54:44 2021 +0200
-@@ -107,12 +107,12 @@
-
- #else
-
--# define CFFI_CHECK_FFI_CLOSURE_ALLOC 0
--# define CFFI_CHECK_FFI_CLOSURE_ALLOC_MAYBE 0
--# define CFFI_CHECK_FFI_PREP_CLOSURE_LOC 0
--# define CFFI_CHECK_FFI_PREP_CLOSURE_LOC_MAYBE 0
--# define CFFI_CHECK_FFI_PREP_CIF_VAR 0
--# define CFFI_CHECK_FFI_PREP_CIF_VAR_MAYBE 0
-+# define CFFI_CHECK_FFI_CLOSURE_ALLOC 1
-+# define CFFI_CHECK_FFI_CLOSURE_ALLOC_MAYBE 1
-+# define CFFI_CHECK_FFI_PREP_CLOSURE_LOC 1
-+# define CFFI_CHECK_FFI_PREP_CLOSURE_LOC_MAYBE 1
-+# define CFFI_CHECK_FFI_PREP_CIF_VAR 1
-+# define CFFI_CHECK_FFI_PREP_CIF_VAR_MAYBE 1
-
- #endif
-
diff --git a/packages/cfgrib/meta.yaml b/packages/cfgrib/meta.yaml
new file mode 100644
index 00000000..8fd06581
--- /dev/null
+++ b/packages/cfgrib/meta.yaml
@@ -0,0 +1,24 @@
+package:
+ name: cfgrib
+ version: 0.9.10.4
+ top-level:
+ - cfgrib
+source:
+ url: https://files.pythonhosted.org/packages/69/b4/5389e5b3240d24aa1210ba698b3c5c8c800e1a83842af9b1effa52b4a389/cfgrib-0.9.10.4.tar.gz
+ sha256: b490078192aa13ec89c77296110355521442325866b16a996f4b3cf421542909
+ patches:
+ - patches/0001-dataset-inferred-dtype.patch
+requirements:
+ run:
+ - attrs
+ - click
+ - eccodes
+ - numpy
+ - xarray
+about:
+ home: https://github.com/ecmwf/cfgrib
+ PyPI: https://pypi.org/project/cfgrib
+ summary:
+ Python interface to map GRIB files to the NetCDF Common Data Model following
+ the CF Convention using ecCodes.
+ license: Apache License Version 2.0
diff --git a/packages/cfgrib/patches/0001-dataset-inferred-dtype.patch b/packages/cfgrib/patches/0001-dataset-inferred-dtype.patch
new file mode 100644
index 00000000..2104d93a
--- /dev/null
+++ b/packages/cfgrib/patches/0001-dataset-inferred-dtype.patch
@@ -0,0 +1,50 @@
+diff --git a/cfgrib/dataset.py b/cfgrib/dataset.py
+index e4f91ec..f81afb7 100644
+--- a/cfgrib/dataset.py
++++ b/cfgrib/dataset.py
+@@ -330,11 +330,11 @@ class OnDiskArray:
+ ] = attr.attrib(repr=False)
+ missing_value: float
+ geo_ndim: int = attr.attrib(default=1, repr=False)
+- dtype = np.dtype("float32")
++ dtype: np.dtype = attr.attrib(default=np.dtype("float32"), repr=False)
+
+ def build_array(self) -> np.ndarray:
+ """Helper method used to test __getitem__"""
+- array = np.full(self.shape, fill_value=np.nan, dtype="float32")
++ array = np.full(self.shape, fill_value=np.nan, dtype=self.dtype)
+ for header_indexes, message_ids in self.field_id_index.items():
+ # NOTE: fill a single field as found in the message
+ message = self.index.get_field(message_ids[0]) # type: ignore
+@@ -348,7 +348,7 @@ class OnDiskArray:
+ header_item_list = expand_item(item[: -self.geo_ndim], self.shape)
+ header_item = [{ix: i for i, ix in enumerate(it)} for it in header_item_list]
+ array_field_shape = tuple(len(i) for i in header_item_list) + self.shape[-self.geo_ndim :]
+- array_field = np.full(array_field_shape, fill_value=np.nan, dtype="float32")
++ array_field = np.full(array_field_shape, fill_value=np.nan, dtype=self.dtype)
+ for header_indexes, message_ids in self.field_id_index.items():
+ try:
+ array_field_indexes = [it[ix] for it, ix in zip(header_item, header_indexes)]
+@@ -566,12 +566,22 @@ def build_variable_components(
+ extra_coords_data[coord_name][header_value] = coord_value
+ offsets[tuple(header_indexes)] = message_ids
+ missing_value = data_var_attrs.get("missingValue", messages.MISSING_VAUE_INDICATOR)
++ if len(offsets) > 0:
++ # Infer the dtype from the first data message
++ header_indexes, message_ids = next(iter(offsets.items()))
++ message = index.get_field(message_ids[0])
++ values = get_values_in_order(message, np.empty(shape)[header_indexes].shape)
++ dtype = values.dtype
++ else:
++ # Fall back to a reasonable default dtype
++ dtype = np.dtype("float32")
+ on_disk_array = OnDiskArray(
+ index=index,
+ shape=shape,
+ field_id_index=offsets,
+ missing_value=missing_value,
+ geo_ndim=len(geo_dims),
++ dtype=dtype,
+ )
+
+ if "time" in coord_vars and "step" in coord_vars:
diff --git a/packages/cftime/meta.yaml b/packages/cftime/meta.yaml
index fe8f4d86..7468dd5f 100644
--- a/packages/cftime/meta.yaml
+++ b/packages/cftime/meta.yaml
@@ -1,11 +1,11 @@
package:
name: cftime
- version: 1.6.2
+ version: 1.6.3
top-level:
- cftime
source:
- url: https://files.pythonhosted.org/packages/cd/db/c528f26ee2dbac1dc348189386c2df745770bb22c02542e281d60212cb13/cftime-1.6.2.tar.gz
- sha256: 8614c00fb8a5046de304fdd86dbd224f99408185d7b245ac6628d0276596e6d2
+ url: https://files.pythonhosted.org/packages/ee/cb/2dcae27c58d3dc773848d273eb4036513eca06ae92733dc2ba4b7a59878f/cftime-1.6.3.tar.gz
+ sha256: d0a6b29f72a13f08e008b9becff247cc75c84acb213332ede18879c5b6aa4dfd
requirements:
run:
diff --git a/packages/click-plugins/meta.yaml b/packages/click-plugins/meta.yaml
new file mode 100644
index 00000000..17e56170
--- /dev/null
+++ b/packages/click-plugins/meta.yaml
@@ -0,0 +1,18 @@
+package:
+ name: click-plugins
+ version: 1.1.1
+ top-level:
+ - click_plugins
+source:
+ url: https://files.pythonhosted.org/packages/e9/da/824b92d9942f4e472702488857914bdd50f73021efea15b4cad9aca8ecef/click_plugins-1.1.1-py2.py3-none-any.whl
+ sha256: 5d262006d3222f5057fd81e1623d4443e41dcda5dc815c06b442aa3c02889fc8
+requirements:
+ run:
+ - click
+about:
+ home: https://github.com/click-contrib/click-plugins
+ PyPI: https://pypi.org/project/click-plugins
+ summary:
+ An extension module for click to enable registering CLI commands via setuptools