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nf-core Pipelines

nf-core is a community effort to collect a curated set of analysis pipelines built using Nextflow. It provides portable, documented, automated pipelines that guarantee reproducibility. These pipelines can be accessed in Code Ocean through a single button import function. This provides easy access to 100+ standardized and customizable workflows, which can greatly reduce the time to perform new analyses.

This section covers how to Import nf-core pipelines and go through an nf-core RNAseq tutorial.