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| 1 | +--- |
| 2 | +# Display name |
| 3 | +title: Augustin Luna |
| 4 | + |
| 5 | +# Username (this should match the folder name) |
| 6 | +authors: |
| 7 | +- Augustin Luna |
| 8 | + |
| 9 | +#Author Names (alternative spellings etc) |
| 10 | +names: |
| 11 | +- A. Luna |
| 12 | + |
| 13 | +# Is this the primary user of the site? |
| 14 | +superuser: false |
| 15 | + |
| 16 | +# Role/position |
| 17 | +role: BioPAX Delegate |
| 18 | + |
| 19 | +# Organizations/Affiliations |
| 20 | +organizations: |
| 21 | +- name: National Library of Medicine (USA) |
| 22 | + url: |
| 23 | + |
| 24 | +university: National Library of Medicine (USA) |
| 25 | + |
| 26 | +# Short bio (displayed in user profile at end of posts) |
| 27 | +bio: Augustin Luna (PhD in Bioinformatics) is an Investigator at the Computational Biology Branch, National Library of Medicine (NLM) & Developmental Therapeutics Branch, National Cancer Institute (NCI), National Institutes of Health (NIH). The Luna lab conducts research to improve clinical outcomes, concentrated on areas of 1) network biology; specifically, mechanisms of external perturbation response using machine learning methods, and 2) standardizing biological data representations for integration. His group develops software tools for cancer drug discovery using network-guided approaches like SketchLay, TargetScore, CausalPath, textToKnowledgeGraph, CellMiner Cross-Database (CellMinerCDB), TumorComparer, NetBoxR, CellBox, drGT, DrugAgent, etc. He is also involved in the development of BioPAX and SBGN. |
| 28 | + |
| 29 | +interests: |
| 30 | +- Systems Biology |
| 31 | +- Analysis and Visualization of Biological Networks |
| 32 | +- Cancer Drug Discovery |
| 33 | +- Large-Scale -omics Data Analysis |
| 34 | +- Data Extraction from Text |
| 35 | +- Data Aggregation & Harmonization across Sources |
| 36 | + |
| 37 | +#projects: |
| 38 | +#- <a href="https://www.cellml.org/">CellML</a> |
| 39 | +#- <a href="https://reproduciblebiomodels.org/">Center for Reproducible Biomedical Modeling</a> |
| 40 | +#- <a href="https://models.physiomeproject.org/">Physiome Model Repository</a> |
| 41 | +#- <a href="https://journal.physiomeproject.org/">Physiome journal</a> |
| 42 | + |
| 43 | +#department: |
| 44 | +#- Auckland Bioengineering Institute |
| 45 | + |
| 46 | +education: |
| 47 | + courses: |
| 48 | + - course: PhD in Bioinformatics |
| 49 | + institution: |
| 50 | + year: |
| 51 | + |
| 52 | +# Social/Academic Networking |
| 53 | +# For available icons, see: https://sourcethemes.com/academic/docs/page-builder/#icons |
| 54 | +# For an email link, use "fas" icon pack, "envelope" icon, and a link in the |
| 55 | +# form "mailto:[email protected]" or "#contact" for contact widget. |
| 56 | +social: |
| 57 | +# - icon: envelope |
| 58 | +# icon_pack: fas |
| 59 | +# link: '#contact' # For a direct email link, use "mailto:[email protected]". |
| 60 | +#- icon: user-graduate |
| 61 | +# icon_pack: fas |
| 62 | +# link: https://profiles.auckland.ac.nz/d-nickerson |
| 63 | +#- icon: twitter |
| 64 | +# icon_pack: fab |
| 65 | +# link: https://twitter.com/andreshouse?lang=en |
| 66 | +#- icon: google-scholar |
| 67 | +# icon_pack: ai |
| 68 | +# link: https://scholar.google.com/citations?user=56_TdbgAAAAJ&hl=en |
| 69 | +#- icon: user-graduate |
| 70 | +# icon_pack: fas |
| 71 | +# link: https://www.colorado.edu/ecee/chris-myers |
| 72 | +#- icon: github |
| 73 | +# icon_pack: fab |
| 74 | +# link: https://github.com/nickerso |
| 75 | +#- icon: external-link-alt |
| 76 | +# icon_pack: fas |
| 77 | +# link: https://scholar.google.com/citations?user=56_TdbgAAAAJ&hl=en |
| 78 | +- icon: orcid |
| 79 | + icon_pack: fab |
| 80 | + link: https://orcid.org/0000-0001-5709-371X |
| 81 | +#- icon: university |
| 82 | +# icon_pack: fas |
| 83 | +# link: https://www.auckland.ac.nz/en/abi.html |
| 84 | +# - icon: user |
| 85 | +# icon_pack: fas |
| 86 | +# link: https://scholar.google.co.uk/citations?user=sIwtMXoAAAAJ |
| 87 | +# - icon: zotero |
| 88 | +# icon_pack: ai |
| 89 | +# link: https://scholar.google.co.uk/citations?user=sIwtMXoAAAAJ |
| 90 | +# - icon: ieee |
| 91 | +# icon_pack: ai |
| 92 | +# link: https://scholar.google.co.uk/citations?user=sIwtMXoAAAAJ |
| 93 | +# - icon: overleaf |
| 94 | +# icon_pack: ai |
| 95 | +# link: https://scholar.google.co.uk/citations?user=sIwtMXoAAAAJ |
| 96 | + |
| 97 | +# Link to a PDF of your resume/CV from the About widget. |
| 98 | +# To enable, copy your resume/CV to `static/files/cv.pdf` and uncomment the lines below. |
| 99 | +# - icon: cv |
| 100 | +# icon_pack: ai |
| 101 | +# link: files/cv.pdf |
| 102 | + |
| 103 | +# Enter email to display Gravatar (if Gravatar enabled in Config) |
| 104 | + |
| 105 | + |
| 106 | +# Organizational groups that you belong to (for People widget) |
| 107 | +# Set this to `[]` or comment out if you are not using People widget. |
| 108 | +user_groups: |
| 109 | +- Coordinators |
| 110 | + |
| 111 | +# # #any user groups to display on the page |
| 112 | +# display_groups: |
| 113 | +# - SynBioHub Tool |
| 114 | +# - SBOL Explorer Tool |
| 115 | +# - SBOL Canvas Tool |
| 116 | +# - SBOL Designer Tool |
| 117 | +# - SynBioHub Plugins Tool |
| 118 | +--- |
| 119 | + |
| 120 | +Augustin Luna (PhD in Bioinformatics) is an Investigator at the Computational Biology Branch, National Library of Medicine (NLM) & Developmental Therapeutics Branch, National Cancer Institute (NCI), National Institutes of Health (NIH). The Luna lab conducts research to improve clinical outcomes, concentrated on areas of 1) network biology; specifically, mechanisms of external perturbation response using machine learning methods, and 2) standardizing biological data representations for integration. His group develops software tools for cancer drug discovery using network-guided approaches like SketchLay, TargetScore, CausalPath, textToKnowledgeGraph, CellMiner Cross-Database (CellMinerCDB), TumorComparer, NetBoxR, CellBox, drGT, DrugAgent, etc. He is also involved in the development of BioPAX and SBGN. |
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