Comment on this issue when beta is refreshed.

[kdahlquist]

I'm opening this issue so that you can post a comment here when the GRNsight beta server is refreshed, so that @kdahlquist (and others) will get an e-mail notification.

[NAnguiano]

The beta has been refreshed with the fix for issue #408. It also includes the tweaks from #397 and #395.

[NAnguiano]

Beta has been refreshed! It has issues #396 #397 #398 #399 and #419.

[NAnguiano]

For anyone who refreshes beta in the future, keep in mind that the node apps are now being run from the top directory, not the server and web-client directories. The apps are called using server/app.js and web-client/app.js. This is a direct result of the npm start implementation. npm start can't be used on the beta server itself because of the additional requirements, so running the apps on the parent directory is now required.

[NAnguiano]

Beta was refreshed with the new pull request just before the meeting. It included the fixes for #395,
#396, and #399.

[kdahlquist]

Did you increment the version number? Shouldn't we be on 2.0.3 now? I will look at it and post comments on the relevant issues.

[NAnguiano]

The version number is now properly incremented.

[NAnguiano]

Beta has been refreshed from PR #446 and #432.

[NAnguiano]

Beta has been refreshed from PR #448.

[NAnguiano]

Beta is refreshed from PR #459.

[kdahlquist]

Did Beta get refreshed from PR #460? It doesn't seem so.

[eileenchoe]

My bad -- it did not. I need to review how to refresh beta, I haven't actually done a refresh myself yet.

[kdahlquist]

Since you @anuvarsh, @NAnguiano, and @mihirsamdarshi seem to be working right now, will somebody refresh beta from PR #460 so it is up to date with the beta branch? Thanks.

[NAnguiano]

@kdahlquist @eileenchoe I updated it about 10 mins ago, so it should be up to date now!

[kdahlquist]

Got it!

[NAnguiano]

@eileenchoe I made a quick guide on the wiki to refresh the server right here. There's a more detailed guide on the wiki if you want to read it as well. :)

[NAnguiano]

beta has been refreshed

[dondi]

While the main beta line is in a pause as @NAnguiano finishes up, I figured it wouldn't hurt to upload the temporary normalization branch from @anuvarsh. This version, bumping to 2.0.17, includes the latest normalization implementation, including restoration of the previously lost functionality.

This version was branched from beta so all of the features from that branch as of May the 4th (be with you) should still be available anyway.

[dondi]

Beta points back to the beta branch now so it is at 2.0.16. If this branch is updated and changed, we should skip to 2.0.18 because normalization was inserted in between.

[kdahlquist]

Just noting that beta has been refreshed by @NAnguiano to 2.0.18.

[NAnguiano]

Beta is refreshed from PR #458 :)

[eileenchoe]

Beta refreshed from PR #486, #490, and #492!

[ahmad00m]

PR #1026 have been merged into beta. The version and modified date has been changed to reflect the new changes. beta is currently at v6.0.7

[Onariaginosa]

PR #1039 and #1040 has been merged into beta. The version and modified date has been updated. beta is now at v7.0.0

[dondi]

PR #1045, containing the fix for #1016, has been merged into beta. Version has been updated to v7.0.1

[dondi]

beta now has PR #1048 and PR #1049, holding fixes to #1033 and #1034

[dondi]

beta is now at 7.0.5, finally including PR #1037, which addresses #992. Local databases merging beta from this point will need to be revised accordingly

[dondi]

beta has been updated to 7.0.6 integrating PR #1063 to address issue #1050. Some notes have already been made on refining this fix further

[dondi]

beta is now on 7.0.7 integrating PR #1064 with refinements for issue #1050

[dondi]

beta is now on 7.0.8 integrating PRs #1073 and #1075 addressing issues #1072 and #1065 respectively

[dondi]

beta is now on 7.0.9 integrating @ceciliazaragoza’s code style changes address issue #1002

[akaiap]

beta is now on 7.0.12 integrating @ntran18 #1094

[ntran18]

beta is now on 7.0.13 integrating @ntran18 integrating PRs #1096 and #1101 to address issue #1079, #1097 to address issue #1054, and #1100 to fix issue #1099

[ceciliazaragoza]

beta is now on 7.0.14 integrating @ceciliazaragoza integrating PR #1109 and PR #1110 to address issue #1081 and @ntran18 integrating PR #1105 to address issue #1089.

[ceciliazaragoza]

beta is now on 7.0.15 integrating @ceciliazaragoza integrating PR #1112 and PR #1114 to address issue #1083 .

[dondi]

beta is now on 7.1.4 integrating PRs #1123, #1124, and #1125

[dondi]

beta has been updated to 7.1.5 with PRS #1127 and #1128

[dondi]

It took a little more time due to some delays on my part and additional review iterations, but beta is now at 7.1.6! PRs in this version include: #1129, #1131, #1132, #1133, #1134, #1136, and #1137. These PRs address issues #1080, #1130, #1059, #1093, #1098, #1068, #1107, #1108

That’s quite a few PRs and issues addressed—it’s truly bug-bash time 🐜🔨

[dondi]

We have add a new code review tag to distinguish issues that are deployed and need QA/verification vs. issues that are on PRs. @akaiap @ceciliazaragoza @dondi @kdahlquist will seek to verify the remaining review requested issues on beta with an eye toward closing them out next week

[dondi]

beta has been updated to 7.1.7, including candidate fixes for #1053, #1093, and #59

[dondi]

beta is now at 7.1.8, now including GitHub Actions continuous integration (CI) via #1118 and a fix for #1142

[dondi]

beta is now at 7.1.9. with the main change being a renaming of our environment variables to purely DB_USERNAME and DB_PASSWORD, reflecting that our database now contains more than just expression data (#1030)

Folks with local copies should, after merging this latest beta version, rename their local environment variables accordingly (i.e., no more EXPRESSION_ in the beginning)

[dondi]

beta has been updated to 7.1.10, with the hallmark of this release being focused on our transition to GitHub Actions: #1145, #1146, and #1147

[dondi]

beta has been updated to 7.1.11 to include the fix for #1144

[dondi]

beta has been updated to 7.2.2 to include for #1082