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Type: Package
Package: anndata
Title: 'anndata' for R (Superseded)
Version: 0.9.0
Authors@R:
c(person(given = "Philipp",
family = "Angerer",
role = "ccp",
email = "phil.angerer@gmail.com",
comment = c(ORCID = "0000-0002-0369-2888")),
person(given = "Alex",
family = "Wolf",
role = "ccp",
email = "f.alex.wolf@gmx.de",
comment = c(ORCID = "0000-0002-8760-7838")),
person(given = "Isaac",
family = "Virshup",
role = "ccp",
comment = c(ORCID = "0000-0002-1710-8945")),
person(given = "Sergei",
family = "Rybakov",
role = "ccp",
comment = c(ORCID = "0000-0002-4944-6586")),
person(given = "Robrecht",
family = "Cannoodt",
role = c("aut", "cre", "cph"),
email = "rcannood@gmail.com",
comment = c(ORCID = "0000-0003-3641-729X")))
Description: A 'reticulate' wrapper for the Python package 'anndata'.
Provides a scalable way of keeping track of data and learned
annotations. Used to read from and write to the h5ad file format.
This package is superseded by 'anndataR'
<https://anndataR.scverse.org>, which provides native R backends for
the 'AnnData' data structure, along with conversion to/from
'SingleCellExperiment' and 'Seurat' objects.
License: MIT + file LICENSE
URL: https://anndata.dynverse.org, https://github.com/dynverse/anndata
BugReports: https://github.com/dynverse/anndata/issues
Depends:
R (>= 3.5.0)
Imports:
assertthat,
cli,
lifecycle,
Matrix,
methods,
R6,
reticulate (>= 1.41)
Suggests:
stats,
testthat,
knitr,
rmarkdown
Encoding: UTF-8
Roxygen: list(markdown = TRUE)
RoxygenNote: 7.3.3
Config/reticulate:
list(
packages = list(
list(package = "anndata")
)
)
VignetteBuilder: knitr