grun.prof.example

# GRUN AUTO-PROFILER
#
# README:
#
# This is a PERL script that operates on the $cmd variable to auto-set the $mem and $cpu variables
#
# The resulting $cpu and $mem variables are then used to increase the memory and cpu requests for
# submitted jobs
#
# You can use any variable names you want... and simply return an array with 2 members ($cpu, $mem);
#
# This allows users to run jobs more naturally.
#
# EXAMPLE:
#       $cpu = 2 if $cmd =~ /\balchemy\b/
#       $mem = 3000 if $cmd =~ /\tophat\b/ && -s $cmd[4] > 100000;