Ghalton python3.6 error

[mhdhassan]

Dear @fmder
I am trying to install ghalton package i encounter the following error (python.3.6) any advice how to solve it.

Kind regards,

Collecting ghalton
Using cached https://files.pythonhosted.org/packages/e7/95/8869ba0de83e2b3aa30b40d4c1a4aaf8339f77130728523b8508aa581c27/ghalton-0.6.2.tar.gz
Building wheels for collected packages: ghalton
Running setup.py bdist_wheel for ghalton: started
Running setup.py bdist_wheel for ghalton: finished with status 'error'
Complete output from command /usr/bin/python3.6 -u -c "import setuptools, tokenize;file='/tmp/pycharm-packaging4/ghalton/setup.py';f=getattr(tokenize, 'open', open)(file);code=f.read().replace('\r\n', '\n');f.close();exec(compile(code, file, 'exec'))" bdist_wheel -d /tmp/tmpegi_1aclpip-wheel- --python-tag cp36:
/usr/lib/python3.6/distutils/dist.py:261: UserWarning: Unknown distribution option: 'long_description_content_type'
warnings.warn(msg)
running bdist_wheel
running build
running build_py
creating build
creating build/lib.linux-x86_64-3.6
creating build/lib.linux-x86_64-3.6/ghalton
copying ghalton/constants.py -> build/lib.linux-x86_64-3.6/ghalton
copying ghalton/ghalton_wrapper.py -> build/lib.linux-x86_64-3.6/ghalton
copying ghalton/init.py -> build/lib.linux-x86_64-3.6/ghalton
warning: build_py: byte-compiling is disabled, skipping.

running build_ext
building 'ghalton._ghalton_wrapper' extension
creating build/temp.linux-x86_64-3.6
creating build/temp.linux-x86_64-3.6/src
x86_64-linux-gnu-gcc -pthread -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/python3.6m -c src/Halton_wrap.cxx -o build/temp.linux-x86_64-3.6/src/Halton_wrap.o -stdlib=libc++
x86_64-linux-gnu-gcc: error: unrecognized command line option ‘-stdlib=libc++’
error: command 'x86_64-linux-gnu-gcc' failed with exit status 1

---

Running setup.py clean for ghalton
Failed to build ghalton
Installing collected packages: ghalton
Running setup.py install for ghalton: started
Running setup.py install for ghalton: finished with status 'error'
Complete output from command /usr/bin/python3.6 -u -c "import setuptools, tokenize;file='/tmp/pycharm-packaging4/ghalton/setup.py';f=getattr(tokenize, 'open', open)(file);code=f.read().replace('\r\n', '\n');f.close();exec(compile(code, file, 'exec'))" install --record /tmp/pip-k1nbqx8_-record/install-record.txt --single-version-externally-managed --compile:
/usr/lib/python3.6/distutils/dist.py:261: UserWarning: Unknown distribution option: 'long_description_content_type'
warnings.warn(msg)
running install
running build
running build_py
creating build
creating build/lib.linux-x86_64-3.6
creating build/lib.linux-x86_64-3.6/ghalton
copying ghalton/constants.py -> build/lib.linux-x86_64-3.6/ghalton
copying ghalton/ghalton_wrapper.py -> build/lib.linux-x86_64-3.6/ghalton
copying ghalton/init.py -> build/lib.linux-x86_64-3.6/ghalton
warning: build_py: byte-compiling is disabled, skipping.

running build_ext
building 'ghalton._ghalton_wrapper' extension
creating build/temp.linux-x86_64-3.6
creating build/temp.linux-x86_64-3.6/src
x86_64-linux-gnu-gcc -pthread -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/python3.6m -c src/Halton_wrap.cxx -o build/temp.linux-x86_64-3.6/src/Halton_wrap.o -stdlib=libc++
x86_64-linux-gnu-gcc: error: unrecognized command line option ‘-stdlib=libc++’
error: command 'x86_64-linux-gnu-gcc' failed with exit status 1

----------------------------------------

Failed building wheel for ghalton
Command "/usr/bin/python3.6 -u -c "import setuptools, tokenize;file='/tmp/pycharm-packaging4/ghalton/setup.py';f=getattr(tokenize, 'open', open)(file);code=f.read().replace('\r\n', '\n');f.close();exec(compile(code, file, 'exec'))" install --record /tmp/pip-k1nbqx8_-record/install-record.txt --single-version-externally-managed --compile" failed with error code 1 in /tmp/pycharm-packaging4/ghalton/

[fmder]

What is your OS? Wheels are available for most common OS on PyPI. Maybe clean your pip cache can help.

https://pypi.org/project/ghalton/#files

[mhdhassan]

dear @fmder
I did pip cache purge (did not work).
OS is Ubuntu Ubuntu 18.04.5 LTS
I have lengthy searched the internet for this issue but unfortunately without much luck. below some of the errors that I have encountered .

Kind Regards,

mohammed@utwks605:Downloads$ pip3 install ghalton-0.6.2-cp27-cp27mu-manylinux2010_x86_64.whl --use-feature=2020-resolver
WARNING: pip is being invoked by an old script wrapper. This will fail in a future version of pip.
Please see pypa/pip#5599 for advice on fixing the underlying issue.
To avoid this problem you can invoke Python with '-m pip' instead of running pip directly.
Defaulting to user installation because normal site-packages is not writeable
ERROR: ghalton-0.6.2-cp27-cp27mu-manylinux2010_x86_64.whl is not a supported wheel on this platform.
mohammed@utwks605:Downloads$ pip3 install ghalton-0.6.2-cp27-cp27m-manylinux2010_x86_64.whl --use-feature=2020-resolver
WARNING: pip is being invoked by an old script wrapper. This will fail in a future version of pip.
Please see pypa/pip#5599 for advice on fixing the underlying issue.
To avoid this problem you can invoke Python with '-m pip' instead of running pip directly.
Defaulting to user installation because normal site-packages is not writeable
ERROR: ghalton-0.6.2-cp27-cp27m-manylinux2010_x86_64.whl is not a supported wheel on this platform.
mohammed@utwks605:Downloads$

[fmder]

Would it be a pip issue? The warning issued by pip look suspicious. You may bevrunning an old pip. I suggest you to create a clean virtual environment and update pip with pip install -U pip.

[cserpell]

I am experiencing a similar issue in a clean environment, it may be related to source compiled by a different compiler as mentioned here ? https://stackoverflow.com/questions/24419832/unrecognized-command-line-option-stdlib-libc-with-macports-gcc48

Or to the deprecation warning in the output?

To reproduce:

python3 -m venv p3
. p3/bin/activate
pip install --upgrade pip
pip --version
python --version
pip install ghalton

I get:

pip 22.3.1 from /home/cserpell/git/infiniteqr/itl/p3/lib/python3.10/site-packages/pip (python 3.10)
Python 3.10.7
  DEPRECATION: ghalton is being installed using the legacy 'setup.py install' method, because it does not have a 'pyproject.toml' and the 'wheel' package is not installed. pip 23.1 will enforce this behaviour change. A possible replacement is to enable the '--use-pep517' option. Discussion can be found at https://github.com/pypa/pip/issues/8559
  Running setup.py install for ghalton ... error
  error: subprocess-exited-with-error
  
  × Running setup.py install for ghalton did not run successfully.
  │ exit code: 1
  ╰─> [18 lines of output]
      running install
      /home/cserpell/git/infiniteqr/itl/pp/lib/python3.10/site-packages/setuptools/command/install.py:34: SetuptoolsDeprecationWarning: setup.py install is deprecated. Use build and pip and other standards-based tools.
        warnings.warn(
      running build
      running build_py
      creating build
      creating build/lib.linux-x86_64-3.10
      creating build/lib.linux-x86_64-3.10/ghalton
      copying ghalton/__init__.py -> build/lib.linux-x86_64-3.10/ghalton
      copying ghalton/constants.py -> build/lib.linux-x86_64-3.10/ghalton
      copying ghalton/ghalton_wrapper.py -> build/lib.linux-x86_64-3.10/ghalton
      running build_ext
      building 'ghalton._ghalton_wrapper' extension
      creating build/temp.linux-x86_64-3.10
      creating build/temp.linux-x86_64-3.10/src
      x86_64-linux-gnu-gcc -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/home/cserpell/git/infiniteqr/itl/pp/include -I/usr/include/python3.10 -c src/Halton.cpp -o build/temp.linux-x86_64-3.10/src/Halton.o -stdlib=libc++
      x86_64-linux-gnu-gcc: error: unrecognized command-line option ‘-stdlib=libc++’
      error: command '/usr/bin/x86_64-linux-gnu-gcc' failed with exit code 1
      [end of output]
  
  note: This error originates from a subprocess, and is likely not a problem with pip.
error: legacy-install-failure

× Encountered error while trying to install package.
╰─> ghalton

note: This is an issue with the package mentioned above, not pip.

[fmder]

On what system are you trying to build ghalton?

[cserpell]

Ubuntu,
Python 3.10.7
pip 22.3.1