Update Keras to 3.13.1 to fix security bug (#297)

Author: wsxrdv

.github/workflows/fork_pr_benchmarks_run.yml

@@ -23,10 +23,10 @@ jobs:
 
       # begin: Use source sedpack package
       - uses: actions/checkout@v6
-      - name: Set up Python 3.10
+      - name: Set up Python 3.11
         uses: actions/setup-python@v6
         with:
-          python-version: '3.10'
+          python-version: '3.11'
           cache: 'pip'
       - name: Get pip cache directory
         id: pip-cache

.github/workflows/mypy.yml

@@ -21,10 +21,10 @@ jobs:
     runs-on: ubuntu-22.04
     steps:
       - uses: actions/checkout@v6
-      - name: Set up Python 3.10
+      - name: Set up Python 3.11
         uses: actions/setup-python@v6
         with:
-          python-version: '3.10'
+          python-version: '3.11'
           cache: 'pip'
       - name: Get pip cache directory
         id: pip-cache

.github/workflows/piptest.yml

@@ -25,10 +25,10 @@ jobs:
           - runner: macos-latest  # arm64
     steps:
       - uses: actions/checkout@v6
-      - name: Set up Python 3.10
+      - name: Set up Python 3.11
         uses: actions/setup-python@v6
         with:
-          python-version: '3.10'
+          python-version: '3.11'
           cache: 'pip'
       - name: Installing sedpack pip package
         run: |

.github/workflows/pylint.yml

@@ -27,7 +27,7 @@ jobs:
     runs-on: ubuntu-22.04
     strategy:
       matrix:
-        python-version: ['3.10', '3.11', '3.12']
+        python-version: ['3.11', '3.12', '3.13']
     steps:
       - uses: actions/checkout@v6
       - name: Set up Python ${{ matrix.python-version }}

.github/workflows/pytest.yml

@@ -33,10 +33,10 @@ jobs:
     if: github.event_name != 'schedule'
     steps:
       - uses: actions/checkout@v6
-      - name: Set up Python 3.10
+      - name: Set up Python 3.11
         uses: actions/setup-python@v6
         with:
-          python-version: '3.10'
+          python-version: '3.11'
           cache: 'pip'
       - name: Get pip cache directory
         id: pip-cache
@@ -79,10 +79,10 @@ jobs:
     runs-on: ubuntu-22.04
     steps:
       - uses: actions/checkout@v6
-      - name: Set up Python 3.10
+      - name: Set up Python 3.11
         uses: actions/setup-python@v6
         with:
-          python-version: '3.10'
+          python-version: '3.11'
           cache: 'pip'
       - name: Get pip cache directory
         id: pip-cache

.github/workflows/yapf.yml

@@ -19,10 +19,10 @@ jobs:
     runs-on: ubuntu-22.04
     steps:
       - uses: actions/checkout@v6
-      - name: Set up Python 3.10
+      - name: Set up Python 3.11
         uses: actions/setup-python@v6
         with:
-          python-version: '3.10'
+          python-version: '3.11'
           cache: 'pip'
       - name: Install dependencies
         run: |

pyproject.toml

@@ -18,7 +18,7 @@ authors = [
 ]
 description = "General ML dataset package"
 readme = "README.md"
-requires-python = ">=3.10"
+requires-python = ">=3.11"
 keywords = ["machine learning", "dataset"]
 license = {text = "Apache License 2.0"}
 classifiers = [

requirements.txt

@@ -1,9 +1,5 @@
-#
-# This file is autogenerated by pip-compile with Python 3.13
-# by the following command:
-#
-#    pip-compile --allow-unsafe --generate-hashes --output-file=requirements.txt pyproject.toml
-#
+# This file was autogenerated by uv via the following command:
+#    uv pip compile pyproject.toml --generate-hashes -o requirements.txt
 absl-py==2.3.0 \
     --hash=sha256:9824a48b654a306168f63e0d97714665f8490b8d89ec7bf2efc24bf67cf579b3 \
     --hash=sha256:d96fda5c884f1b22178852f30ffa85766d50b99e00775ea626c23304f582fc4f
@@ -229,9 +225,9 @@ idna==3.10 \
     --hash=sha256:12f65c9b470abda6dc35cf8e63cc574b1c52b11df2c86030af0ac09b01b13ea9 \
     --hash=sha256:946d195a0d259cbba61165e88e65941f16e9b36ea6ddb97f00452bae8b1287d3
     # via requests
-keras==3.12.0 \
-    --hash=sha256:02b69e007d5df8042286c3bcc2a888539e3e487590ffb08f6be1b4354df50aa8 \
-    --hash=sha256:536e3f8385a05ae04e82e08715a1a59988578087e187b04cb0a6fad11743f07f
+keras==3.13.1 \
+    --hash=sha256:6593be2e9d057921cd0413b4552c05fe1df73ea4bb03a4f3ec94532077b3e508 \
+    --hash=sha256:670c726dfc9c357fe7ae5ef1c15d8f61ee7fbb40ae9a091a458ec6444a772480
     # via tensorflow
 libclang==18.1.1 \
     --hash=sha256:0b2e143f0fac830156feb56f9231ff8338c20aecfe72b4ffe96f19e5a1dbb69a \
@@ -442,10 +438,10 @@ numpy==2.2.4 \
     --hash=sha256:f486038e44caa08dbd97275a9a35a283a8f1d2f0ee60ac260a1790e76660833c \
     --hash=sha256:f7de08cbe5551911886d1ab60de58448c6df0f67d9feb7d1fb21e9875ef95e91
     # via
+    #   sedpack (pyproject.toml)
     #   h5py
     #   keras
     #   ml-dtypes
-    #   sedpack (pyproject.toml)
     #   tensorboard
     #   tensorflow
 opt-einsum==3.4.0 \
@@ -534,6 +530,7 @@ packaging==25.0 \
     #   keras
     #   tensorboard
     #   tensorflow
+    #   wheel
 pillow==11.3.0 \
     --hash=sha256:023f6d2d11784a465f09fd09a34b150ea4672e85fb3d05931d89f373ab14abb2 \
     --hash=sha256:02a723e6bf909e7cea0dac1b0e0310be9d7650cd66222a5f1c571455c0a45214 \
@@ -776,6 +773,12 @@ semver==3.0.4 \
     --hash=sha256:9c824d87ba7f7ab4a1890799cec8596f15c1241cb473404ea1cb0c55e4b04746 \
     --hash=sha256:afc7d8c584a5ed0a11033af086e8af226a9c0b206f313e0301f8dd7b6b589602
     # via sedpack (pyproject.toml)
+setuptools==80.9.0 \
+    --hash=sha256:062d34222ad13e0cc312a4c02d73f059e86a4acbfbdea8f8f76b28c99f306922 \
+    --hash=sha256:f36b47402ecde768dbfafc46e8e4207b4360c654f1f3bb84475f0a28628fb19c
+    # via
+    #   tensorboard
+    #   tensorflow
 six==1.17.0 \
     --hash=sha256:4721f391ed90541fddacab5acf947aa0d3dc7d27b2e1e8eda2be8970586c3274 \
     --hash=sha256:ff70335d468e7eb6ec65b95b99d3a2836546063f63acc5171de367e834932a81
@@ -1155,11 +1158,3 @@ zstandard==0.23.0 \
     --hash=sha256:fd7699e8fd9969f455ef2926221e0233f81a2542921471382e77a9e2f2b57f4b \
     --hash=sha256:fe3b385d996ee0822fd46528d9f0443b880d4d05528fd26a9119a54ec3f91c69
     # via sedpack (pyproject.toml)
-
-# The following packages are considered to be unsafe in a requirements file:
-setuptools==80.9.0 \
-    --hash=sha256:062d34222ad13e0cc312a4c02d73f059e86a4acbfbdea8f8f76b28c99f306922 \
-    --hash=sha256:f36b47402ecde768dbfafc46e8e4207b4360c654f1f3bb84475f0a28628fb19c
-    # via
-    #   tensorboard
-    #   tensorflow