install.sh

#!/bin/bash
# ./install.sh [directory [jobs]]
# Install GBWTGraph headers and library to the home directory or to the
# specified directory. The number of parallel make jobs is equal to the number
# of logical CPU cores unless specified otherwise.

GBWTGRAPH_DIR=$(pwd)
INCLUDE_DIR=include
INCLUDE=gbwtgraph
LIBRARY_DIR=lib
LIBRARY=libgbwtgraph.a

# Determine the directory where we will install GBWTGraph.
if [ $# -ge 1 ]; then
  PREFIX=${1}
else
  PREFIX=${HOME}
fi
mkdir -p "${PREFIX}" 2> /dev/null
cd "${PREFIX}" > /dev/null 2>&1
if [ $? != 0 ]; then
	echo "Error: Directory '${PREFIX}' does not exist and cannot be created."
	exit 1
else
	PREFIX=$(pwd -P)
fi
echo "Installing GBWTGraph to '${PREFIX}'."

# Determine the number of jobs.
if [ $# -ge 2 ]; then
  JOBS=${2}
else
  JOBS=$(getconf _NPROCESSORS_ONLN)
fi
echo "Running ${JOBS} parallel make jobs."

# Create the include/library directories.
mkdir -p "${INCLUDE_DIR}" 2> /dev/null
if [ $? != 0 ]; then
	echo "Error: Directory '${PREFIX}/${INCLUDE_DIR}' does not exist and cannot be created."
	exit 1
fi
mkdir -p "${LIBRARY_DIR}" 2> /dev/null
if [ $? != 0 ]; then
	echo "Error: Directory '${PREFIX}/${LIBRARY_DIR}' does not exist and cannot be created."
	exit 1
fi

# Build GBWTGraph.
cd "${GBWTGRAPH_DIR}"
make clean > /dev/null
if [ $? != 0 ]; then
	echo "Error: Cleanup failed."
	exit 1
fi
make -j "${JOBS}"
if [ $? != 0 ]; then
	echo "Error: Could not compile GBWTGraph."
	exit 1
fi

# Install GBWTGraph.
cp -R "${INCLUDE_DIR}/${INCLUDE}" "${PREFIX}/${INCLUDE_DIR}" 2> /dev/null
if [ $? != 0 ]; then
	echo "Error: Could not install the headers."
	exit 1
fi
cp "${LIBRARY_DIR}/${LIBRARY}" "${PREFIX}/${LIBRARY_DIR}" 2> /dev/null
if [ $? != 0 ]; then
	echo "Error: Could not install the library."
	exit 1
fi

echo "GBWTGraph installed to '${PREFIX}'."