diff --git a/snakebids/project_template/copier.yaml b/snakebids/project_template/copier.yaml
index 48b58004..e7f5f467 100644
--- a/snakebids/project_template/copier.yaml
+++ b/snakebids/project_template/copier.yaml
@@ -65,7 +65,7 @@ bids_version:
   when: false
 
 python_version:
-  default: ">=3.8,<4.0"
+  default: ">=3.11,<4.0"
   when: false
 
 snakebids_version:
diff --git a/snakebids/project_template/{% if build_system == 'poetry' %}.github{% endif %}/workflows/python-testing.yaml.jinja b/snakebids/project_template/{% if build_system == 'poetry' %}.github{% endif %}/workflows/python-testing.yaml.jinja
new file mode 100644
index 00000000..ee6f3a2c
--- /dev/null
+++ b/snakebids/project_template/{% if build_system == 'poetry' %}.github{% endif %}/workflows/python-testing.yaml.jinja	
@@ -0,0 +1,61 @@
+---
+# This workflow will install Python dependencies, run tests and lint with a variety of Python versions
+# For more information see: https://help.github.com/actions/language-and-framework-guides/using-python-with-github-actions
+
+name: Lint and test workflow
+on:
+  push:
+  workflow_dispatch:
+
+jobs:
+  quality:
+    runs-on: ubuntu-latest
+
+    steps:
+      - name: Install non-python dependencies
+        run: |
+          sudo apt-get install -y graphviz-dev
+
+      - name: Setup Python environment
+        uses: khanlab/actions/.github/actions/action-setup_task-installPyProject@v0.3.2
+        with:
+          python-version: "3.11"
+
+      - name: isort
+        run: poetry run isort {{ app_full_name }}/*.py -c
+
+      - name: Black
+        run: poetry run black {{ app_full_name }} --check
+
+      - name: snakefmt
+        run: poetry run snakefmt {{ app_full_name }} --check
+
+  test:
+    runs-on: ubuntu-latest
+    needs: ["quality"]
+    defaults:
+      run:
+        shell: bash -l {0}
+          
+
+    steps:
+      - name: checkout repository
+        uses: actions/checkout@v4
+
+      - name: Setup Miniforge and mamba
+        uses: conda-incubator/setup-miniconda@v3
+        with:
+          miniforge-variant: Miniforge3
+          miniforge-version: latest
+          mamba-version: "*"
+          use-mamba: true
+          conda-solver: libmamba
+          auto-activate-base: true
+
+      - name: Install snakebids
+        run: |
+          mamba install snakebids -c bioconda -c conda-forge -y
+
+      - name: Test
+        run: |
+          ./{{ app_full_name }}/run.py tests/data test_out participant -np
\ No newline at end of file
diff --git a/snakebids/project_template/{% if build_system == 'poetry' %}poetry.lock{% endif %}.jinja b/snakebids/project_template/{% if build_system == 'poetry' %}poetry.lock{% endif %}.jinja
new file mode 100644
index 00000000..5de7bfc2
--- /dev/null
+++ b/snakebids/project_template/{% if build_system == 'poetry' %}poetry.lock{% endif %}.jinja	
@@ -0,0 +1,2706 @@
+# This file is automatically @generated by Poetry 1.8.3 and should not be changed by hand.
+
+[[package]]
+name = "acres"
+version = "0.5.0"
+description = "Access resources on your terms"
+optional = false
+python-versions = ">=3.9"
+files = [
+    {file = "acres-0.5.0-py3-none-any.whl", hash = "sha256:fcc32b974b510897de0f041609b4234f9ff03e2e960aea088f63973fb106c772"},
+    {file = "acres-0.5.0.tar.gz", hash = "sha256:128b6447bf5df3b6210264feccbfa018b4ac5bd337358319aec6563f99db8f3a"},
+]
+
+[[package]]
+name = "annotated-types"
+version = "0.7.0"
+description = "Reusable constraint types to use with typing.Annotated"
+optional = false
+python-versions = ">=3.8"
+files = [
+    {file = "annotated_types-0.7.0-py3-none-any.whl", hash = "sha256:1f02e8b43a8fbbc3f3e0d4f0f4bfc8131bcb4eebe8849b8e5c773f3a1c582a53"},
+    {file = "annotated_types-0.7.0.tar.gz", hash = "sha256:aff07c09a53a08bc8cfccb9c85b05f1aa9a2a6f23728d790723543408344ce89"},
+]
+
+[[package]]
+name = "appdirs"
+version = "1.4.4"
+description = "A small Python module for determining appropriate platform-specific dirs, e.g. a \"user data dir\"."
+optional = false
+python-versions = "*"
+files = [
+    {file = "appdirs-1.4.4-py2.py3-none-any.whl", hash = "sha256:a841dacd6b99318a741b166adb07e19ee71a274450e68237b4650ca1055ab128"},
+    {file = "appdirs-1.4.4.tar.gz", hash = "sha256:7d5d0167b2b1ba821647616af46a749d1c653740dd0d2415100fe26e27afdf41"},
+]
+
+[[package]]
+name = "argparse-dataclass"
+version = "2.0.0"
+description = "Declarative CLIs with argparse and dataclasses"
+optional = false
+python-versions = ">=3.8"
+files = [
+    {file = "argparse_dataclass-2.0.0-py3-none-any.whl", hash = "sha256:3ffc8852a88d9d98d1364b4441a712491320afb91fb56049afd8a51d74bb52d2"},
+    {file = "argparse_dataclass-2.0.0.tar.gz", hash = "sha256:09ab641c914a2f12882337b9c3e5086196dbf2ee6bf0ef67895c74002cc9297f"},
+]
+
+[[package]]
+name = "arrow"
+version = "1.3.0"
+description = "Better dates & times for Python"
+optional = false
+python-versions = ">=3.8"
+files = [
+    {file = "arrow-1.3.0-py3-none-any.whl", hash = "sha256:c728b120ebc00eb84e01882a6f5e7927a53960aa990ce7dd2b10f39005a67f80"},
+    {file = "arrow-1.3.0.tar.gz", hash = "sha256:d4540617648cb5f895730f1ad8c82a65f2dad0166f57b75f3ca54759c4d67a85"},
+]
+
+[package.dependencies]
+python-dateutil = ">=2.7.0"
+types-python-dateutil = ">=2.8.10"
+
+[package.extras]
+doc = ["doc8", "sphinx (>=7.0.0)", "sphinx-autobuild", "sphinx-autodoc-typehints", "sphinx_rtd_theme (>=1.3.0)"]
+test = ["dateparser (==1.*)", "pre-commit", "pytest", "pytest-cov", "pytest-mock", "pytz (==2021.1)", "simplejson (==3.*)"]
+
+[[package]]
+name = "astor"
+version = "0.8.1"
+description = "Read/rewrite/write Python ASTs"
+optional = false
+python-versions = "!=3.0.*,!=3.1.*,!=3.2.*,!=3.3.*,>=2.7"
+files = [
+    {file = "astor-0.8.1-py2.py3-none-any.whl", hash = "sha256:070a54e890cefb5b3739d19f30f5a5ec840ffc9c50ffa7d23cc9fc1a38ebbfc5"},
+    {file = "astor-0.8.1.tar.gz", hash = "sha256:6a6effda93f4e1ce9f618779b2dd1d9d84f1e32812c23a29b3fff6fd7f63fa5e"},
+]
+
+[[package]]
+name = "attrs"
+version = "25.3.0"
+description = "Classes Without Boilerplate"
+optional = false
+python-versions = ">=3.8"
+files = [
+    {file = "attrs-25.3.0-py3-none-any.whl", hash = "sha256:427318ce031701fea540783410126f03899a97ffc6f61596ad581ac2e40e3bc3"},
+    {file = "attrs-25.3.0.tar.gz", hash = "sha256:75d7cefc7fb576747b2c81b4442d4d4a1ce0900973527c011d1030fd3bf4af1b"},
+]
+
+[package.extras]
+benchmark = ["cloudpickle", "hypothesis", "mypy (>=1.11.1)", "pympler", "pytest (>=4.3.0)", "pytest-codspeed", "pytest-mypy-plugins", "pytest-xdist[psutil]"]
+cov = ["cloudpickle", "coverage[toml] (>=5.3)", "hypothesis", "mypy (>=1.11.1)", "pympler", "pytest (>=4.3.0)", "pytest-mypy-plugins", "pytest-xdist[psutil]"]
+dev = ["cloudpickle", "hypothesis", "mypy (>=1.11.1)", "pre-commit-uv", "pympler", "pytest (>=4.3.0)", "pytest-mypy-plugins", "pytest-xdist[psutil]"]
+docs = ["cogapp", "furo", "myst-parser", "sphinx", "sphinx-notfound-page", "sphinxcontrib-towncrier", "towncrier"]
+tests = ["cloudpickle", "hypothesis", "mypy (>=1.11.1)", "pympler", "pytest (>=4.3.0)", "pytest-mypy-plugins", "pytest-xdist[psutil]"]
+tests-mypy = ["mypy (>=1.11.1)", "pytest-mypy-plugins"]
+
+[[package]]
+name = "bids-validator"
+version = "1.14.7.post0"
+description = "Validator for the Brain Imaging Data Structure"
+optional = false
+python-versions = ">=3.8"
+files = [
+    {file = "bids_validator-1.14.7.post0-py3-none-any.whl", hash = "sha256:a1ee196eae8e5cf3b3fe9fd1985e03997e3e21a40ea3bcb494ff1e0dcec86a89"},
+    {file = "bids_validator-1.14.7.post0.tar.gz", hash = "sha256:e6005a500b75f8a961593fb67d46085107dadb116f59a5c3b524aa0697945b66"},
+]
+
+[package.dependencies]
+bidsschematools = ">=0.10"
+
+[[package]]
+name = "bidsschematools"
+version = "1.0.14"
+description = "Python tools for working with the BIDS schema."
+optional = false
+python-versions = ">=3.9"
+files = [
+    {file = "bidsschematools-1.0.14-py3-none-any.whl", hash = "sha256:6b0e667b96254b5c3a195b918edb7b042b6fd29ce9893550585ebc070518eb09"},
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+]
+
+[package.dependencies]
+acres = "*"
+click = "*"
+pyyaml = "*"
+
+[package.extras]
+all = ["bidsschematools[doc,tests]"]
+dev = ["bidsschematools[tests]", "ruff"]
+doc = ["sphinx (>=1.5.3)", "sphinx_rtd_theme"]
+expressions = ["pyparsing"]
+render = ["markdown-it-py", "pandas", "tabulate"]
+tests = ["bidsschematools[expressions,render,validation]", "codecov", "coverage[toml]", "pytest", "pytest-cov"]
+validation = ["jsonschema"]
+
+[[package]]
+name = "black"
+version = "24.10.0"
+description = "The uncompromising code formatter."
+optional = false
+python-versions = ">=3.9"
+files = [
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+
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+uvloop = ["uvloop (>=0.15.2)"]
+
+[[package]]
+name = "boutiques"
+version = "0.5.30"
+description = "Schema for describing bash command-line tools"
+optional = false
+python-versions = ">=3.9"
+files = [
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+]
+
+[[package]]
+name = "yte"
+version = "1.9.0"
+description = "A YAML template engine with Python expressions"
+optional = false
+python-versions = "<4.0,>=3.7"
+files = [
+    {file = "yte-1.9.0-py3-none-any.whl", hash = "sha256:f7376ed048e7b1e96beb570bcb3b675b2bd54b5fb38890f663e95b6d9973a221"},
+    {file = "yte-1.9.0.tar.gz", hash = "sha256:d259548aa46c5d5ff318f3ecb1732918d1ac3c6708798767ce3823192ce1ba21"},
+]
+
+[package.dependencies]
+argparse-dataclass = ">=1.0.0"
+dpath = ">=2.1,<3.0"
+pyyaml = ">=6.0,<7.0"
+
+[metadata]
+lock-version = "2.0"
+python-versions = ">=3.11,<4.0"
+content-hash = "3203f88538634312773727bd98d3593f3ee1bd15c79b708c110eb9f17ffb9a53"
diff --git a/snakebids/project_template/{% if build_system == 'poetry' %}pyproject.toml{% endif %}.jinja b/snakebids/project_template/{% if build_system == 'poetry' %}pyproject.toml{% endif %}.jinja
index 09c77f78..abfc9d96 100644
--- a/snakebids/project_template/{% if build_system == 'poetry' %}pyproject.toml{% endif %}.jinja	
+++ b/snakebids/project_template/{% if build_system == 'poetry' %}pyproject.toml{% endif %}.jinja	
@@ -22,24 +22,22 @@ classifiers = [
 
 [tool.poetry.dependencies]
 python = "{{ python_version }}"
-snakemake = [
-    { version=">={{ snakemake_version }},<8", python = "<3.11" },
-    { version=">=8.1.2", python = ">=3.11" },
-]
+snakemake = ">=8.1.2"
 snakebids = {{ snakebids_version | format_poetry }}
-{#- newer pulps are incompatible with old snakemakes, and we need to support
-old snakemakes for python versions <3.11. So cap pulp to the last working
-version
-#}
-pulp = { version="<2.8.0", python = "<3.11" }
-pandas = [
-    { version = "<=2.0.3", python = "<3.9" },
-    { version = ">=2.1.1", python = ">=3.12" },
-]
+pandas = [{ version = ">=2.1.1", python = ">=3.12" }]
+
+[tool.poetry.dev-dependencies]
+black = "^24.0.0"
+isort = "^5.10.1"
+poethepoet = "^0.10.0"
+snakefmt = "^0.10.0"
 
 [tool.poetry.scripts]
 {{ name_slug }} = "{{ name_slug }}.run:app.run"
 
+[tool.poe.tasks]
+quality_check = { shell = "isort {{ app_full_name }}/*.py && black {{ app_full_name }} --check && snakefmt {{ app_full_name }} --check" }
+quality_fix = { shell = "isort {{ app_full_name }}/*.py && black {{ app_full_name }}  && snakefmt {{ app_full_name }}" }
 
 [build-system]
 requires = ["poetry-core>=1.0.0"]
diff --git a/snakebids/project_template/{{name_slug}}/workflow/Snakefile b/snakebids/project_template/{{name_slug}}/workflow/Snakefile
index 079a2d39..e617c149 100644
--- a/snakebids/project_template/{{name_slug}}/workflow/Snakefile
+++ b/snakebids/project_template/{{name_slug}}/workflow/Snakefile
@@ -1,6 +1,8 @@
 from snakebids import bids, generate_inputs, get_wildcard_constraints
 
-configfile: 'config/snakebids.yml'
+
+configfile: "config/snakebids.yml"
+
 
 # Get input wildcards
 inputs = generate_inputs(
@@ -11,17 +13,17 @@ inputs = generate_inputs(
     derivatives=config.get("derivatives", None),
     participant_label=config.get("participant_label", None),
     exclude_participant_label=config.get("exclude_participant_label", None),
-    validate=not config.get("plugins.validator.skip", False)
+    validate=not config.get("plugins.validator.skip", False),
 )
 
 
 rule all:
     input:
-        inputs['t1w'].expand(),
-        inputs['bold'].expand()
+        inputs["t1w"].expand(),
+        inputs["bold"].expand(),
     default_target: True
     params:
-        inputs=lambda wcards, input: "- " + "\n- ".join(input)
+        inputs=lambda wcards, input: "- " + "\n- ".join(input),
     shell:
         """
         cat <<EOF