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Vignettes not loading #31

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daaronr opened this issue Jan 30, 2023 · 2 comments
Open

Vignettes not loading #31

daaronr opened this issue Jan 30, 2023 · 2 comments
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bug Something isn't working documentation Improvements or additions to documentation

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@daaronr
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daaronr commented Jan 30, 2023

I installed fresh in Rstudio

devtools::install_github("metamelb-repliCATS/aggreCAT", force = TRUE)

And selected 'yes' to all updates

Then I entered

> library(aggreCAT)
> browseVignettes(package = "aggreCAT")

Which throws:
No vignettes found by browseVignettes(package = "aggreCAT"

vignette(package = "aggreCAT")

Throws no vignettes found.

My sessioninfo is below.

 sessionInfo()
R version 4.1.2 (2021-11-01)
Platform: x86_64-apple-darwin17.0 (64-bit)
Running under: macOS Monterey 12.2.1

Matrix products: default
LAPACK: /Library/Frameworks/R.framework/Versions/4.1/Resources/lib/libRlapack.dylib

locale:
[1] en_GB.UTF-8/en_GB.UTF-8/en_GB.UTF-8/C/en_GB.UTF-8/en_GB.UTF-8

attached base packages:
[1] stats     graphics  grDevices datasets  utils     methods   base     

other attached packages:
 [1] aggreCAT_0.0.0.9004   emmeans_1.7.2         broom_0.7.10         
 [4] rnoodling_0.1         rethinkpriorities_0.1 bettertrace_0.1.3    
 [7] remotes_2.4.2         vtable_1.4.1          kableExtra_1.3.4     
[10] treemapify_2.5.5      stringr_1.5.0         tidyr_1.3.0          
[13] tibble_3.1.8          tidyverse_1.3.2       snakecase_0.11.0     
[16] sjlabelled_1.2.0      scales_1.2.1          santoku_0.6.0        
[19] sandwich_3.0-1        rlang_1.0.6           readstata13_0.10.0   
[22] readr_2.1.3           pryr_0.1.5            plotly_4.10.0        
[25] lubridate_1.9.1       labelled_2.10.0       magrittr_2.0.3       
[28] lmtest_0.9-39         zoo_1.8-9             janitor_2.1.0        
[31] purrr_1.0.1           infer_1.0.0           huxtable_5.5.2       
[34] gtsummary_1.5.0       ggridges_0.5.3        ggrepel_0.9.1        
[37] ggpubr_0.4.0          ggpointdensity_0.1.0  ggthemes_4.2.4       
[40] gganimate_1.0.7       ggplot2_3.4.0         gdata_2.18.0         
[43] forcats_0.5.2         dplyr_1.1.0           downloader_0.4       
[46] downlit_0.4.2         digest_0.6.31         DescTools_0.99.44    
[49] DT_0.21               corrr_0.4.3           bslib_0.4.2          
[52] binom_1.1-1           bookdown_0.24         arm_1.12-2           
[55] lme4_1.1-28           Matrix_1.4-0          MASS_7.3-55          
[58] pacman_0.5.1          here_1.0.1           

loaded via a namespace (and not attached):
  [1] utf8_1.2.2          tidyselect_1.2.0    htmlwidgets_1.5.4   grid_4.1.2         
  [5] devtools_2.4.5      munsell_0.5.0       codetools_0.2-18    miniUI_0.1.1.1     
  [9] withr_2.5.0         colorspace_2.1-0    checkr_0.1.4        knitr_1.42         
 [13] rstudioapi_0.14     stats4_4.1.2        ggsignif_0.6.3      dagitty_0.3-1      
 [17] labeling_0.4.2      bit64_4.0.5         farver_2.1.1        rprojroot_2.0.3    
 [21] TH.data_1.1-0       coda_0.19-4         vctrs_0.5.2         generics_0.1.3     
 [25] xfun_0.36           timechange_0.2.0    R6_2.5.1            VGAM_1.1-7         
 [29] cachem_1.0.6        assertthat_0.2.1    vroom_1.6.1         promises_1.2.0.1   
 [33] multcomp_1.4-18     googlesheets4_1.0.0 rootSolve_1.8.2.3   gtable_0.3.1       
 [37] processx_3.8.0      lmom_2.8            systemfonts_1.0.4   splines_4.1.2      
 [41] rstatix_0.7.0       lazyeval_0.2.2      gargle_1.2.0        checkmate_2.1.0    
 [45] yaml_2.3.7          abind_1.4-5         modelr_0.1.8        crosstalk_1.2.0    
 [49] backports_1.4.1     httpuv_1.6.3        tools_4.1.2         usethis_2.1.6      
 [53] ellipsis_0.3.2      jquerylib_0.1.4     proxy_0.4-26        sessioninfo_1.2.2  
 [57] Rcpp_1.0.10         plyr_1.8.6          progress_1.2.2      ps_1.7.2           
 [61] prettyunits_1.1.1   urlchecker_1.0.1    haven_2.5.1         fs_1.6.0           
 [65] data.table_1.14.6   magick_2.7.3        reprex_2.0.1        googledrive_2.0.0  
 [69] mvtnorm_1.1-3       pkgload_1.3.0       hms_1.1.2           mime_0.12          
 [73] evaluate_0.20       xtable_1.8-4        broom.mixed_0.2.7   readxl_1.3.1       
 [77] surveytools2_0.8    compiler_4.1.2      gt_0.3.1            V8_4.1.0           
 [81] crayon_1.5.2        minqa_1.2.4         htmltools_0.5.4     later_1.3.0        
 [85] tzdb_0.3.0          expm_0.999-6        Exact_3.1           DBI_1.1.1          
 [89] tweenr_1.0.2        gWidgets2_1.0-9     dbplyr_2.1.1        broom.helpers_1.5.0
 [93] boot_1.3-28         car_3.0-12          cli_3.6.0           parallel_4.1.2     
 [97] insight_0.19.0      pkgconfig_2.0.3     xml2_1.3.3          svglite_2.1.1      
[101] webshot_0.5.4       estimability_1.3    rvest_1.0.3         callr_3.7.3        
[105] rmarkdown_2.20      cellranger_1.1.0    gld_2.6.4           curl_5.0.0         
[109] shiny_1.7.1         gtools_3.9.2        nloptr_2.0.0        lifecycle_1.0.3    
[113] nlme_3.1-155        jsonlite_1.8.4      carData_3.0-5       viridisLite_0.4.1  
[117] fansi_1.0.4         pillar_1.8.1        lattice_0.20-45     survival_3.2-13    
[121] fastmap_1.1.0       httr_1.4.4          pkgbuild_1.3.1      glue_1.6.2         
[125] bit_4.0.5           class_7.3-20        stringi_1.7.12      sass_0.4.5         
[129] profvis_0.3.7       ggfittext_0.9.1     memoise_2.0.1       renv_0.15.2        
[133] e1071_1.7-9  
@Doi90 Doi90 added bug Something isn't working documentation Improvements or additions to documentation labels Jan 31, 2023
@Doi90
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Doi90 commented Jan 31, 2023

Looking into it. Vignettes work locally for me on a new branch but fail for anyone else I get to test installing it.

@egouldo
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egouldo commented Mar 28, 2023

Note this is the same issue as #5

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