meta-mar0.4.0.2/.gitignore at main · mirzafarangi/meta-mar0.4.0.2 · GitHub

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# R specific
.Rproj.user
.Rhistory
.RData
.Ruserdata
*.Rproj

# Shiny token
rsconnect/
*_token.txt

# Authentication files
.httr-oauth
.env
*.key
*.pem
.DS_Store

# Large data files
*.csv
*.xlsx
*.xls
*.rds
*.rda
*.RData

# Logs and temp files
*.log
temp/
logs/
tmp/

# Private files you want to exclude
user_data/
private/
confidential/
api_keys.R

# OS specific
.DS_Store
Thumbs.db

# Specific files to exclude from repo (add your private files here)
global_secret.R
user_summary_secret.R
documentation_MetaMar_full.R

# Local development files (not for public repo)
ACTIVITY.md
test_meta.sh
analysis/
*.sh

# JOSS submission drafts (keep paper.md and paper.bib, exclude drafts)
paper_draft.md
*.draft.md