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Update Miredot documentation, Javadoc and Jacoco reports
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‎README.md

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# mudrod.github.io
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A website for the MUDROD semantic discovery and search project funded by NASA AIST (NNX15AM85G)
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A website for the MUDROD semantic discovery and search project funded by NASA AIST (NNX15AM85G), part of OceanWorks

‎_config.yml

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# Site settings
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title: MUDROD
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subtitle: Mining and Utilizing Dataset Relevancy from Oceanographic Datasets to Improve Data Discovery and Access project funded by NASA AIST (NNX15AM85G)
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subtitle: Mining and Utilizing Dataset Relevancy from Oceanographic Datasets to Improve Data Discovery and Access project funded by NASA AIST (NNX15AM85G), part of the OceanWorks project.
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baseurl: "" # the subpath of your site, e.g. /blog/
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url: "mudrod.github.io" # the base hostname & protocol for your site
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# Build settings
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markdown: kramdown
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github: https://github.com/mudrod
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github: https://github.com/aist-oceanworks/mudrod
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google_analytics:
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paginate: 10

‎_layouts/default.html

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</head>
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<body class="{{ page.slug }}">
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<div class="ribbon">
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<a href="https://github.com/mudrod/mudrod">Fork me on GitHub</a>
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<a href="https://github.com/aist-oceanworks/mudrod">Fork me on GitHub</a>
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</div>
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<main class="main">
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{% include header.html %}

‎jacoco/gov.nasa.jpl.mudrod.discoveryengine/DiscoveryEngineAbstract.html

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<?xml version="1.0" encoding="UTF-8"?><!DOCTYPE html PUBLIC "-//W3C//DTD XHTML 1.0 Strict//EN" "http://www.w3.org/TR/xhtml1/DTD/xhtml1-strict.dtd"><html xmlns="http://www.w3.org/1999/xhtml" lang="en"><head><meta http-equiv="Content-Type" content="text/html;charset=UTF-8"/><link rel="stylesheet" href="../jacoco-resources/report.css" type="text/css"/><link rel="shortcut icon" href="../jacoco-resources/report.gif" type="image/gif"/><title>DiscoveryEngineAbstract</title><script type="text/javascript" src="../jacoco-resources/sort.js"></script></head><body onload="initialSort(['breadcrumb'])"><div class="breadcrumb" id="breadcrumb"><span class="info"><a href="../jacoco-sessions.html" class="el_session">Sessions</a></span><a href="../index.html" class="el_report">Mudrod :: Core</a> &gt; <a href="index.html" class="el_package">gov.nasa.jpl.mudrod.discoveryengine</a> &gt; <span class="el_class">DiscoveryEngineAbstract</span></div><h1>DiscoveryEngineAbstract</h1><table class="coverage" cellspacing="0" id="coveragetable"><thead><tr><td class="sortable" id="a" onclick="toggleSort(this)">Element</td><td class="down sortable bar" id="b" onclick="toggleSort(this)">Missed Instructions</td><td class="sortable ctr2" id="c" onclick="toggleSort(this)">Cov.</td><td class="sortable bar" id="d" onclick="toggleSort(this)">Missed Branches</td><td class="sortable ctr2" id="e" onclick="toggleSort(this)">Cov.</td><td class="sortable ctr1" id="f" onclick="toggleSort(this)">Missed</td><td class="sortable ctr2" id="g" onclick="toggleSort(this)">Cxty</td><td class="sortable ctr1" id="h" onclick="toggleSort(this)">Missed</td><td class="sortable ctr2" id="i" onclick="toggleSort(this)">Lines</td><td class="sortable ctr1" id="j" onclick="toggleSort(this)">Missed</td><td class="sortable ctr2" id="k" onclick="toggleSort(this)">Methods</td></tr></thead><tfoot><tr><td>Total</td><td class="bar">6 of 6</td><td class="ctr2">0%</td><td class="bar">0 of 0</td><td class="ctr2">n/a</td><td class="ctr1">1</td><td class="ctr2">1</td><td class="ctr1">2</td><td class="ctr2">2</td><td class="ctr1">1</td><td class="ctr2">1</td></tr></tfoot><tbody><tr><td id="a0"><a href="DiscoveryEngineAbstract.java.html#L29" class="el_method">DiscoveryEngineAbstract(Properties, ESDriver, SparkDriver)</a></td><td class="bar" id="b0"><img src="../jacoco-resources/redbar.gif" width="120" height="10" title="6" alt="6"/></td><td class="ctr2" id="c0">0%</td><td class="bar" id="d0"/><td class="ctr2" id="e0">n/a</td><td class="ctr1" id="f0">1</td><td class="ctr2" id="g0">1</td><td class="ctr1" id="h0">2</td><td class="ctr2" id="i0">2</td><td class="ctr1" id="j0">1</td><td class="ctr2" id="k0">1</td></tr></tbody></table><div class="footer"><span class="right">Created with <a href="http://www.jacoco.org/jacoco">JaCoCo</a> 0.7.10.201709300959</span></div></body></html>

‎jacoco/gov.nasa.jpl.mudrod.discoveryengine/DiscoveryEngineAbstract.java.html

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<?xml version="1.0" encoding="UTF-8"?><!DOCTYPE html PUBLIC "-//W3C//DTD XHTML 1.0 Strict//EN" "http://www.w3.org/TR/xhtml1/DTD/xhtml1-strict.dtd"><html xmlns="http://www.w3.org/1999/xhtml" lang="en"><head><meta http-equiv="Content-Type" content="text/html;charset=UTF-8"/><link rel="stylesheet" href="../jacoco-resources/report.css" type="text/css"/><link rel="shortcut icon" href="../jacoco-resources/report.gif" type="image/gif"/><title>DiscoveryEngineAbstract.java</title><link rel="stylesheet" href="../jacoco-resources/prettify.css" type="text/css"/><script type="text/javascript" src="../jacoco-resources/prettify.js"></script></head><body onload="window['PR_TAB_WIDTH']=4;prettyPrint()"><div class="breadcrumb" id="breadcrumb"><span class="info"><a href="../jacoco-sessions.html" class="el_session">Sessions</a></span><a href="../index.html" class="el_report">Mudrod :: Core</a> &gt; <a href="index.source.html" class="el_package">gov.nasa.jpl.mudrod.discoveryengine</a> &gt; <span class="el_source">DiscoveryEngineAbstract.java</span></div><h1>DiscoveryEngineAbstract.java</h1><pre class="source lang-java linenums">/*
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* Licensed under the Apache License, Version 2.0 (the &quot;License&quot;); you
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* may not use this file except in compliance with the License.
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* You may obtain a copy of the License at
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*
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* http://www.apache.org/licenses/LICENSE-2.0
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*
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* Unless required by applicable law or agreed to in writing, software
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* distributed under the License is distributed on an &quot;AS IS&quot; BASIS,
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* WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
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* See the License for the specific language governing permissions and
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* limitations under the License.
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*/
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package gov.nasa.jpl.mudrod.discoveryengine;
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import gov.nasa.jpl.mudrod.driver.ESDriver;
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import gov.nasa.jpl.mudrod.driver.SparkDriver;
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import java.io.Serializable;
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import java.util.Properties;
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public abstract class DiscoveryEngineAbstract extends MudrodAbstract implements Serializable {
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/**
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*
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*/
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private static final long serialVersionUID = 1L;
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public DiscoveryEngineAbstract(Properties props, ESDriver es, SparkDriver spark) {
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<span class="nc" id="L29"> super(props, es, spark);</span>
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<span class="nc" id="L30"> }</span>
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/**
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* Abstract method of preprocess
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*/
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public abstract void preprocess();
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/**
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* Abstract method of process
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*/
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public abstract void process();
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/**
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* Abstract method of output
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*/
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public abstract void output();
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}
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</pre><div class="footer"><span class="right">Created with <a href="http://www.jacoco.org/jacoco">JaCoCo</a> 0.7.10.201709300959</span></div></body></html>

‎jacoco/gov.nasa.jpl.mudrod.discoveryengine/DiscoveryStepAbstract.html

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<?xml version="1.0" encoding="UTF-8"?><!DOCTYPE html PUBLIC "-//W3C//DTD XHTML 1.0 Strict//EN" "http://www.w3.org/TR/xhtml1/DTD/xhtml1-strict.dtd"><html xmlns="http://www.w3.org/1999/xhtml" lang="en"><head><meta http-equiv="Content-Type" content="text/html;charset=UTF-8"/><link rel="stylesheet" href="../jacoco-resources/report.css" type="text/css"/><link rel="shortcut icon" href="../jacoco-resources/report.gif" type="image/gif"/><title>DiscoveryStepAbstract</title><script type="text/javascript" src="../jacoco-resources/sort.js"></script></head><body onload="initialSort(['breadcrumb'])"><div class="breadcrumb" id="breadcrumb"><span class="info"><a href="../jacoco-sessions.html" class="el_session">Sessions</a></span><a href="../index.html" class="el_report">Mudrod :: Core</a> &gt; <a href="index.html" class="el_package">gov.nasa.jpl.mudrod.discoveryengine</a> &gt; <span class="el_class">DiscoveryStepAbstract</span></div><h1>DiscoveryStepAbstract</h1><table class="coverage" cellspacing="0" id="coveragetable"><thead><tr><td class="sortable" id="a" onclick="toggleSort(this)">Element</td><td class="down sortable bar" id="b" onclick="toggleSort(this)">Missed Instructions</td><td class="sortable ctr2" id="c" onclick="toggleSort(this)">Cov.</td><td class="sortable bar" id="d" onclick="toggleSort(this)">Missed Branches</td><td class="sortable ctr2" id="e" onclick="toggleSort(this)">Cov.</td><td class="sortable ctr1" id="f" onclick="toggleSort(this)">Missed</td><td class="sortable ctr2" id="g" onclick="toggleSort(this)">Cxty</td><td class="sortable ctr1" id="h" onclick="toggleSort(this)">Missed</td><td class="sortable ctr2" id="i" onclick="toggleSort(this)">Lines</td><td class="sortable ctr1" id="j" onclick="toggleSort(this)">Missed</td><td class="sortable ctr2" id="k" onclick="toggleSort(this)">Methods</td></tr></thead><tfoot><tr><td>Total</td><td class="bar">6 of 6</td><td class="ctr2">0%</td><td class="bar">0 of 0</td><td class="ctr2">n/a</td><td class="ctr1">1</td><td class="ctr2">1</td><td class="ctr1">2</td><td class="ctr2">2</td><td class="ctr1">1</td><td class="ctr2">1</td></tr></tfoot><tbody><tr><td id="a0"><a href="DiscoveryStepAbstract.java.html#L32" class="el_method">DiscoveryStepAbstract(Properties, ESDriver, SparkDriver)</a></td><td class="bar" id="b0"><img src="../jacoco-resources/redbar.gif" width="120" height="10" title="6" alt="6"/></td><td class="ctr2" id="c0">0%</td><td class="bar" id="d0"/><td class="ctr2" id="e0">n/a</td><td class="ctr1" id="f0">1</td><td class="ctr2" id="g0">1</td><td class="ctr1" id="h0">2</td><td class="ctr2" id="i0">2</td><td class="ctr1" id="j0">1</td><td class="ctr2" id="k0">1</td></tr></tbody></table><div class="footer"><span class="right">Created with <a href="http://www.jacoco.org/jacoco">JaCoCo</a> 0.7.10.201709300959</span></div></body></html>

‎jacoco/gov.nasa.jpl.mudrod.discoveryengine/DiscoveryStepAbstract.java.html

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<?xml version="1.0" encoding="UTF-8"?><!DOCTYPE html PUBLIC "-//W3C//DTD XHTML 1.0 Strict//EN" "http://www.w3.org/TR/xhtml1/DTD/xhtml1-strict.dtd"><html xmlns="http://www.w3.org/1999/xhtml" lang="en"><head><meta http-equiv="Content-Type" content="text/html;charset=UTF-8"/><link rel="stylesheet" href="../jacoco-resources/report.css" type="text/css"/><link rel="shortcut icon" href="../jacoco-resources/report.gif" type="image/gif"/><title>DiscoveryStepAbstract.java</title><link rel="stylesheet" href="../jacoco-resources/prettify.css" type="text/css"/><script type="text/javascript" src="../jacoco-resources/prettify.js"></script></head><body onload="window['PR_TAB_WIDTH']=4;prettyPrint()"><div class="breadcrumb" id="breadcrumb"><span class="info"><a href="../jacoco-sessions.html" class="el_session">Sessions</a></span><a href="../index.html" class="el_report">Mudrod :: Core</a> &gt; <a href="index.source.html" class="el_package">gov.nasa.jpl.mudrod.discoveryengine</a> &gt; <span class="el_source">DiscoveryStepAbstract.java</span></div><h1>DiscoveryStepAbstract.java</h1><pre class="source lang-java linenums">/*
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* Licensed under the Apache License, Version 2.0 (the &quot;License&quot;); you
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* may not use this file except in compliance with the License.
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* You may obtain a copy of the License at
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*
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* http://www.apache.org/licenses/LICENSE-2.0
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*
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* Unless required by applicable law or agreed to in writing, software
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* distributed under the License is distributed on an &quot;AS IS&quot; BASIS,
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* WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
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* See the License for the specific language governing permissions and
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* limitations under the License.
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*/
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package gov.nasa.jpl.mudrod.discoveryengine;
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import gov.nasa.jpl.mudrod.driver.ESDriver;
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import gov.nasa.jpl.mudrod.driver.SparkDriver;
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import java.util.Properties;
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/*
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* Generic class of discovery engine step
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*/
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public abstract class DiscoveryStepAbstract extends MudrodAbstract {
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/**
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*
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*/
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private static final long serialVersionUID = 1L;
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public DiscoveryStepAbstract(Properties props, ESDriver es, SparkDriver spark) {
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<span class="nc" id="L32"> super(props, es, spark);</span>
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<span class="nc" id="L33"> }</span>
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/**
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* Abstract class of step execution without parameter
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*
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* @return An instance of Object
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*/
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public abstract Object execute();
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/**
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* Abstract class of step execution with parameter
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*
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* @param o an instance of object
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* @return An instance of object
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*/
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public abstract Object execute(Object o);
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}
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</pre><div class="footer"><span class="right">Created with <a href="http://www.jacoco.org/jacoco">JaCoCo</a> 0.7.10.201709300959</span></div></body></html>

‎jacoco/gov.nasa.jpl.mudrod.discoveryengine/MetadataDiscoveryEngine.html

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<?xml version="1.0" encoding="UTF-8"?><!DOCTYPE html PUBLIC "-//W3C//DTD XHTML 1.0 Strict//EN" "http://www.w3.org/TR/xhtml1/DTD/xhtml1-strict.dtd"><html xmlns="http://www.w3.org/1999/xhtml" lang="en"><head><meta http-equiv="Content-Type" content="text/html;charset=UTF-8"/><link rel="stylesheet" href="../jacoco-resources/report.css" type="text/css"/><link rel="shortcut icon" href="../jacoco-resources/report.gif" type="image/gif"/><title>MetadataDiscoveryEngine</title><script type="text/javascript" src="../jacoco-resources/sort.js"></script></head><body onload="initialSort(['breadcrumb'])"><div class="breadcrumb" id="breadcrumb"><span class="info"><a href="../jacoco-sessions.html" class="el_session">Sessions</a></span><a href="../index.html" class="el_report">Mudrod :: Core</a> &gt; <a href="index.html" class="el_package">gov.nasa.jpl.mudrod.discoveryengine</a> &gt; <span class="el_class">MetadataDiscoveryEngine</span></div><h1>MetadataDiscoveryEngine</h1><table class="coverage" cellspacing="0" id="coveragetable"><thead><tr><td class="sortable" id="a" onclick="toggleSort(this)">Element</td><td class="down sortable bar" id="b" onclick="toggleSort(this)">Missed Instructions</td><td class="sortable ctr2" id="c" onclick="toggleSort(this)">Cov.</td><td class="sortable bar" id="d" onclick="toggleSort(this)">Missed Branches</td><td class="sortable ctr2" id="e" onclick="toggleSort(this)">Cov.</td><td class="sortable ctr1" id="f" onclick="toggleSort(this)">Missed</td><td class="sortable ctr2" id="g" onclick="toggleSort(this)">Cxty</td><td class="sortable ctr1" id="h" onclick="toggleSort(this)">Missed</td><td class="sortable ctr2" id="i" onclick="toggleSort(this)">Lines</td><td class="sortable ctr1" id="j" onclick="toggleSort(this)">Missed</td><td class="sortable ctr2" id="k" onclick="toggleSort(this)">Methods</td></tr></thead><tfoot><tr><td>Total</td><td class="bar">92 of 92</td><td class="ctr2">0%</td><td class="bar">0 of 0</td><td class="ctr2">n/a</td><td class="ctr1">5</td><td class="ctr2">5</td><td class="ctr1">20</td><td class="ctr2">20</td><td class="ctr1">5</td><td class="ctr2">5</td></tr></tfoot><tbody><tr><td id="a3"><a href="MetadataDiscoveryEngine.java.html#L60" class="el_method">process()</a></td><td class="bar" id="b0"><img src="../jacoco-resources/redbar.gif" width="120" height="10" title="47" alt="47"/></td><td class="ctr2" id="c0">0%</td><td class="bar" id="d0"/><td class="ctr2" id="e0">n/a</td><td class="ctr1" id="f0">1</td><td class="ctr2" id="g0">1</td><td class="ctr1" id="h0">9</td><td class="ctr2" id="i0">9</td><td class="ctr1" id="j0">1</td><td class="ctr2" id="k0">1</td></tr><tr><td id="a2"><a href="MetadataDiscoveryEngine.java.html#L46" class="el_method">preprocess()</a></td><td class="bar" id="b1"><img src="../jacoco-resources/redbar.gif" width="86" height="10" title="34" alt="34"/></td><td class="ctr2" id="c1">0%</td><td class="bar" id="d1"/><td class="ctr2" id="e1">n/a</td><td class="ctr1" id="f1">1</td><td class="ctr2" id="g1">1</td><td class="ctr1" id="h1">7</td><td class="ctr2" id="i1">7</td><td class="ctr1" id="j1">1</td><td class="ctr2" id="k1">1</td></tr><tr><td id="a0"><a href="MetadataDiscoveryEngine.java.html#L39" class="el_method">MetadataDiscoveryEngine(Properties, ESDriver, SparkDriver)</a></td><td class="bar" id="b2"><img src="../jacoco-resources/redbar.gif" width="15" height="10" title="6" alt="6"/></td><td class="ctr2" id="c2">0%</td><td class="bar" id="d2"/><td class="ctr2" id="e2">n/a</td><td class="ctr1" id="f2">1</td><td class="ctr2" id="g2">1</td><td class="ctr1" id="h2">2</td><td class="ctr2" id="i2">2</td><td class="ctr1" id="j2">1</td><td class="ctr2" id="k2">1</td></tr><tr><td id="a4"><a href="MetadataDiscoveryEngine.java.html#L36" class="el_method">static {...}</a></td><td class="bar" id="b3"><img src="../jacoco-resources/redbar.gif" width="10" height="10" title="4" alt="4"/></td><td class="ctr2" id="c3">0%</td><td class="bar" id="d3"/><td class="ctr2" id="e3">n/a</td><td class="ctr1" id="f3">1</td><td class="ctr2" id="g3">1</td><td class="ctr1" id="h3">1</td><td class="ctr2" id="i3">1</td><td class="ctr1" id="j3">1</td><td class="ctr2" id="k3">1</td></tr><tr><td id="a1"><a href="MetadataDiscoveryEngine.java.html#L74" class="el_method">output()</a></td><td class="bar" id="b4"><img src="../jacoco-resources/redbar.gif" width="2" height="10" title="1" alt="1"/></td><td class="ctr2" id="c4">0%</td><td class="bar" id="d4"/><td class="ctr2" id="e4">n/a</td><td class="ctr1" id="f4">1</td><td class="ctr2" id="g4">1</td><td class="ctr1" id="h4">1</td><td class="ctr2" id="i4">1</td><td class="ctr1" id="j4">1</td><td class="ctr2" id="k4">1</td></tr></tbody></table><div class="footer"><span class="right">Created with <a href="http://www.jacoco.org/jacoco">JaCoCo</a> 0.7.10.201709300959</span></div></body></html>

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