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daisybio.md

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nf-core/configs: DaiSyBio

To use the DaiSyBio profile, run a nf-core pipeline with -profile daisybio,<singularity/apptainer>.

This will automatically download and apply 'daisybio.config' as a nextflow config file.

The config file will set slurm as a scheduler for the compute cluster, define max resources, and specify cache locations for singularity, apptainer, and iGenomes. Pipeline-specific parameters still need to be configured manually.

Work directories will be kept at /nfs/scratch/nf-core_work/ in a directory named after the full path of the launch directory ("." separated). Thy are automatically removed after a successful pipeline run. To keep the intermediate file, e.g. for using the -resume function, add keep_work as a profile: -profile daisybio,<singularity/apptainer>,keep_work.