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nfcore_custom.config
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nfcore_custom.config
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/*
* -------------------------------------------------
* nfcore custom profile Nextflow config file
* -------------------------------------------------
* Config options for all custom environments.
* Cluster-specific config options should be saved
* in the conf folder and imported under a profile
* name here.
*/
//Please use a new line per include Config section to allow easier linting/parsing. Thank you.
profiles {
abims { includeConfig "${params.custom_config_base}/conf/abims.config" }
adcra { includeConfig "${params.custom_config_base}/conf/adcra.config" }
alice { includeConfig "${params.custom_config_base}/conf/alice.config" }
apollo { includeConfig "${params.custom_config_base}/conf/apollo.config" }
arcc { includeConfig "${params.custom_config_base}/conf/arcc.config" }
aws_tower { includeConfig "${params.custom_config_base}/conf/aws_tower.config" }
awsbatch { includeConfig "${params.custom_config_base}/conf/awsbatch.config" }
azurebatch { includeConfig "${params.custom_config_base}/conf/azurebatch.config" }
bi { includeConfig "${params.custom_config_base}/conf/bi.config" }
bigpurple { includeConfig "${params.custom_config_base}/conf/bigpurple.config" }
bih { includeConfig "${params.custom_config_base}/conf/bih.config" }
binac { includeConfig "${params.custom_config_base}/conf/binac.config" }
biohpc_gen { includeConfig "${params.custom_config_base}/conf/biohpc_gen.config" }
biowulf { includeConfig "${params.custom_config_base}/conf/biowulf.config" }
bluebear { includeConfig "${params.custom_config_base}/conf/bluebear.config" }
cambridge { includeConfig "${params.custom_config_base}/conf/cambridge.config" }
cbe { includeConfig "${params.custom_config_base}/conf/cbe.config" }
ccga_dx { includeConfig "${params.custom_config_base}/conf/ccga_dx.config" }
ccga_med { includeConfig "${params.custom_config_base}/conf/ccga_med.config" }
cedars { includeConfig "${params.custom_config_base}/conf/cedars.config" }
ceres { includeConfig "${params.custom_config_base}/conf/ceres.config" }
cfc { includeConfig "${params.custom_config_base}/conf/cfc.config" }
cfc_dev { includeConfig "${params.custom_config_base}/conf/cfc_dev.config" }
cheaha { includeConfig "${params.custom_config_base}/conf/cheaha.config" }
computerome { includeConfig "${params.custom_config_base}/conf/computerome.config" }
create { includeConfig "${params.custom_config_base}/conf/create.config" }
crg { includeConfig "${params.custom_config_base}/conf/crg.config" }
crick { includeConfig "${params.custom_config_base}/conf/crick.config" }
crukmi { includeConfig "${params.custom_config_base}/conf/crukmi.config" }
csiro_petrichor { includeConfig "${params.custom_config_base}/conf/csiro_petrichor.config" }
czbiohub_aws { includeConfig "${params.custom_config_base}/conf/czbiohub_aws.config" }
daisybio { includeConfig "${params.custom_config_base}/conf/daisybio.config" }
denbi_qbic { includeConfig "${params.custom_config_base}/conf/denbi_qbic.config" }
dkfz { includeConfig "${params.custom_config_base}/conf/dkfz.config" }
ebc { includeConfig "${params.custom_config_base}/conf/ebc.config" }
eddie { includeConfig "${params.custom_config_base}/conf/eddie.config" }
ebi_codon { includeConfig "${params.custom_config_base}/conf/ebi_codon.config" }
ebi_codon_slurm { includeConfig "${params.custom_config_base}/conf/ebi_codon_slurm.config" }
einstein { includeConfig "${params.custom_config_base}/conf/einstein.config" }
embl_hd { includeConfig "${params.custom_config_base}/conf/embl_hd.config" }
engaging { includeConfig "${params.custom_config_base}/conf/engaging.config" }
ethz_euler { includeConfig "${params.custom_config_base}/conf/ethz_euler.config" }
eva { includeConfig "${params.custom_config_base}/conf/eva.config" }
fgcz { includeConfig "${params.custom_config_base}/conf/fgcz.config" }
fub_curta { includeConfig "${params.custom_config_base}/conf/fub_curta.config" }
genotoul { includeConfig "${params.custom_config_base}/conf/genotoul.config" }
genouest { includeConfig "${params.custom_config_base}/conf/genouest.config" }
gis { includeConfig "${params.custom_config_base}/conf/gis.config" }
google { includeConfig "${params.custom_config_base}/conf/google.config" }
googlebatch { includeConfig "${params.custom_config_base}/conf/googlebatch.config" }
googlels { includeConfig "${params.custom_config_base}/conf/googlels.config" }
hasta { includeConfig "${params.custom_config_base}/conf/hasta.config" }
hki { includeConfig "${params.custom_config_base}/conf/hki.config"}
hypatia { includeConfig "${params.custom_config_base}/conf/hypatia.config"}
icr_davros { includeConfig "${params.custom_config_base}/conf/icr_davros.config" }
ifb_core { includeConfig "${params.custom_config_base}/conf/ifb_core.config" }
imb { includeConfig "${params.custom_config_base}/conf/imb.config" }
imperial { includeConfig "${params.custom_config_base}/conf/imperial.config" }
incliva { includeConfig "${params.custom_config_base}/conf/incliva.config" }
ipop_up { includeConfig "${params.custom_config_base}/conf/ipop_up.config" }
janelia { includeConfig "${params.custom_config_base}/conf/janelia.config" }
jax { includeConfig "${params.custom_config_base}/conf/jax.config" }
jex { includeConfig "${params.custom_config_base}/conf/jex.config" }
ku_sund_danhead { includeConfig "${params.custom_config_base}/conf/ku_sund_danhead.config"}
leicester { includeConfig "${params.custom_config_base}/conf/leicester.config" }
lugh { includeConfig "${params.custom_config_base}/conf/lugh.config" }
m3c { includeConfig "${params.custom_config_base}/conf/m3c.config" }
maestro { includeConfig "${params.custom_config_base}/conf/maestro.config" }
mana { includeConfig "${params.custom_config_base}/conf/mana.config" }
marjorie { includeConfig "${params.custom_config_base}/conf/marjorie.config" }
marvin { includeConfig "${params.custom_config_base}/conf/marvin.config" }
mccleary { includeConfig "${params.custom_config_base}/conf/mccleary.config" }
medair { includeConfig "${params.custom_config_base}/conf/medair.config" }
mjolnir_globe { includeConfig "${params.custom_config_base}/conf/mjolnir_globe.config" }
mpcdf { includeConfig "${params.custom_config_base}/conf/mpcdf.config" }
mpcdf_viper { includeConfig "${params.custom_config_base}/conf/mpcdf_viper.config" }
munin { includeConfig "${params.custom_config_base}/conf/munin.config" }
nci_gadi { includeConfig "${params.custom_config_base}/conf/nci_gadi.config" }
nu_genomics { includeConfig "${params.custom_config_base}/conf/nu_genomics.config" }
nygc { includeConfig "${params.custom_config_base}/conf/nygc.config" }
nyu_hpc { includeConfig "${params.custom_config_base}/conf/nyu_hpc.config" }
oist { includeConfig "${params.custom_config_base}/conf/oist.config" }
pasteur { includeConfig "${params.custom_config_base}/conf/pasteur.config" }
pawsey_nimbus { includeConfig "${params.custom_config_base}/conf/pawsey_nimbus.config" }
pawsey_setonix { includeConfig "${params.custom_config_base}/conf/pawsey_setonix.config" }
pdc_kth { includeConfig "${params.custom_config_base}/conf/pdc_kth.config" }
phoenix { includeConfig "${params.custom_config_base}/conf/phoenix.config" }
psmn { includeConfig "${params.custom_config_base}/conf/psmn.config" }
qmul_apocrita { includeConfig "${params.custom_config_base}/conf/qmul_apocrita.config" }
rosalind { includeConfig "${params.custom_config_base}/conf/rosalind.config" }
rosalind_uge { includeConfig "${params.custom_config_base}/conf/rosalind_uge.config" }
roslin { includeConfig "${params.custom_config_base}/conf/roslin.config" }
sage { includeConfig "${params.custom_config_base}/conf/sage.config" }
sahmri { includeConfig "${params.custom_config_base}/conf/sahmri.config" }
sanger { includeConfig "${params.custom_config_base}/conf/sanger.config"}
ilifu { includeConfig "${params.custom_config_base}/conf/ilifu.config"}
scw { includeConfig "${params.custom_config_base}/conf/scw.config"}
seawulf { includeConfig "${params.custom_config_base}/conf/seawulf.config"}
seg_globe { includeConfig "${params.custom_config_base}/conf/seg_globe.config"}
self_hosted_runner { includeConfig "${params.custom_config_base}/conf/self_hosted_runner.config"}
software_license { includeConfig "${params.custom_config_base}/conf/software_license.config"}
tigem { includeConfig "${params.custom_config_base}/conf/tigem.config"}
tubingen_apg { includeConfig "${params.custom_config_base}/conf/tubingen_apg.config" }
tufts { includeConfig "${params.custom_config_base}/conf/tufts.config"}
tuos_stanage { includeConfig "${params.custom_config_base}/conf/tuos_stanage.config"}
ucd_sonic { includeConfig "${params.custom_config_base}/conf/ucd_sonic.config"}
ucl_cscluster { includeConfig "${params.custom_config_base}/conf/ucl_cscluster.config"}
ucl_myriad { includeConfig "${params.custom_config_base}/conf/ucl_myriad.config"}
uct_hpc { includeConfig "${params.custom_config_base}/conf/uct_hpc.config" }
uge { includeConfig "${params.custom_config_base}/conf/uge.config" }
unc_lccc { includeConfig "${params.custom_config_base}/conf/unc_lccc.config" }
unc_longleaf { includeConfig "${params.custom_config_base}/conf/unc_longleaf.config" }
unibe_ibu { includeConfig "${params.custom_config_base}/conf/unibe_ibu.config" }
uod_hpc { includeConfig "${params.custom_config_base}/conf/uod_hpc.config" }
uppmax { includeConfig "${params.custom_config_base}/conf/uppmax.config" }
utd_ganymede { includeConfig "${params.custom_config_base}/conf/utd_ganymede.config" }
uw_hyak_pedslabs { includeConfig "${params.custom_config_base}/conf/uw_hyak_pedslabs.config" }
uzh { includeConfig "${params.custom_config_base}/conf/uzh.config" }
uzl_omics { includeConfig "${params.custom_config_base}/conf/uzl_omics.config" }
vai { includeConfig "${params.custom_config_base}/conf/vai.config" }
vsc_calcua { includeConfig "${params.custom_config_base}/conf/vsc_calcua.config" }
vsc_kul_uhasselt { includeConfig "${params.custom_config_base}/conf/vsc_kul_uhasselt.config" }
vsc_ugent { includeConfig "${params.custom_config_base}/conf/vsc_ugent.config" }
wehi { includeConfig "${params.custom_config_base}/conf/wehi.config" }
wustl_htcf { includeConfig "${params.custom_config_base}/conf/wustl_htcf.config" }
xanadu { includeConfig "${params.custom_config_base}/conf/xanadu.config" }
york_viking { includeConfig "${params.custom_config_base}/conf/york_viking.config"}
}