scdownstream/modules.json at dev · nf-core/scdownstream · GitHub

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{
    "name": "nf-core/scdownstream",
    "homePage": "https://github.com/nf-core/scdownstream",
    "repos": {
        "https://github.com/nf-core/modules.git": {
            "modules": {
                "nf-core": {
                    "anndata/barcodes": {
                        "branch": "master",
                        "git_sha": "e753770db613ce014b3c4bc94f6cba443427b726",
                        "installed_by": ["h5ad_removebackground_barcodes_cellbender_anndata", "modules"]
                    },
                    "anndata/getsize": {
                        "branch": "master",
                        "git_sha": "e753770db613ce014b3c4bc94f6cba443427b726",
                        "installed_by": ["modules"]
                    },
                    "cellbender/merge": {
                        "branch": "master",
                        "git_sha": "e753770db613ce014b3c4bc94f6cba443427b726",
                        "installed_by": ["modules"],
                        "patch": "modules/nf-core/cellbender/merge/cellbender-merge.diff"
                    },
                    "cellbender/removebackground": {
                        "branch": "master",
                        "git_sha": "41dfa3f7c0ffabb96a6a813fe321c6d1cc5b6e46",
                        "installed_by": ["h5ad_removebackground_barcodes_cellbender_anndata", "modules"]
                    },
                    "doubletdetection": {
                        "branch": "master",
                        "git_sha": "e753770db613ce014b3c4bc94f6cba443427b726",
                        "installed_by": ["modules"]
                    },
                    "multiqc": {
                        "branch": "master",
                        "git_sha": "5bdb098216aaf5df9c3b6343e6204cd932503c16",
                        "installed_by": ["modules"]
                    },
                    "scanpy/scrublet": {
                        "branch": "master",
                        "git_sha": "e753770db613ce014b3c4bc94f6cba443427b726",
                        "installed_by": ["modules"]
                    },
                    "scvitools/scar": {
                        "branch": "master",
                        "git_sha": "e753770db613ce014b3c4bc94f6cba443427b726",
                        "installed_by": ["modules"],
                        "patch": "modules/nf-core/scvitools/scar/scvitools-scar.diff"
                    },
                    "scvitools/solo": {
                        "branch": "master",
                        "git_sha": "e753770db613ce014b3c4bc94f6cba443427b726",
                        "installed_by": ["modules"],
                        "patch": "modules/nf-core/scvitools/solo/scvitools-solo.diff"
                    },
                    "untar": {
                        "branch": "master",
                        "git_sha": "00ee87ebb541af0008596400ce6d5f66d79d5408",
                        "installed_by": ["modules"]
                    }
                }
            },
            "subworkflows": {
                "nf-core": {
                    "h5ad_removebackground_barcodes_cellbender_anndata": {
                        "branch": "master",
                        "git_sha": "ed115522edb3c5ed73a891a5d00ee839d157c650",
                        "installed_by": ["subworkflows"]
                    },
                    "utils_nextflow_pipeline": {
                        "branch": "master",
                        "git_sha": "05954dab2ff481bcb999f24455da29a5828af08d",
                        "installed_by": ["subworkflows"]
                    },
                    "utils_nfcore_pipeline": {
                        "branch": "master",
                        "git_sha": "271e7fc14eb1320364416d996fb077421f3faed2",
                        "installed_by": ["subworkflows"]
                    },
                    "utils_nfschema_plugin": {
                        "branch": "master",
                        "git_sha": "4b406a74dc0449c0401ed87d5bfff4252fd277fd",
                        "installed_by": ["subworkflows"]
                    }
                }
            }
        }
    }
}