diff --git a/package.json b/package.json
index 789969c..32eae3f 100644
--- a/package.json
+++ b/package.json
@@ -15,7 +15,6 @@
     "nuxt-hub": "./src/index.mjs"
   },
   "exports": {
-    ".": "./src/index.mjs",
     "./internal": "./src/internal.mjs"
   },
   "files": [
diff --git a/src/commands/database/migrations.mjs b/src/commands/database/migrations.mjs
index e07872f..077e9f3 100644
--- a/src/commands/database/migrations.mjs
+++ b/src/commands/database/migrations.mjs
@@ -2,12 +2,16 @@ import { defineCommand } from 'citty'
 import create from './migrations/create.mjs'
 import list from './migrations/list.mjs'
 import markAllApplied from './migrations/mark-all-applied.mjs'
+import { consola } from 'consola'
 
 export default defineCommand({
   meta: {
     name: 'migrations',
     description: 'Database migrations commands.',
   },
+  async setup() {
+    consola.info('Make sure to run `npx nuxi prepare` before running this command if some migrations are missing.')
+  },
   subCommands: {
     create,
     list,
diff --git a/src/commands/database/migrations/create.mjs b/src/commands/database/migrations/create.mjs
index dcc0b4b..542b745 100644
--- a/src/commands/database/migrations/create.mjs
+++ b/src/commands/database/migrations/create.mjs
@@ -1,6 +1,8 @@
 import { defineCommand } from 'citty'
 import { consola } from 'consola'
-import { useMigrationsStorage, getNextMigrationNumber } from '../../../utils/database.mjs'
+import { writeFile, mkdir } from 'node:fs/promises'
+import { join } from 'pathe'
+import { getNextMigrationNumber } from '../../../utils/database.mjs'
 
 export default defineCommand({
   meta: {
@@ -25,8 +27,10 @@ export default defineCommand({
       .replace(/-+/g, '-') // replace multiple dashes with a single dash
       || 'migration'
     const migrationName = `${nextMigrationNumber}_${name}.sql`
-    await useMigrationsStorage().set(migrationName, `-- Migration number: ${nextMigrationNumber} \t ${new Date().toISOString()}\n`)
+    const userMigrationsDir = join(process.cwd(), 'server/database/migrations')
+    await mkdir(userMigrationsDir, { recursive: true })
+    await writeFile(join(userMigrationsDir, migrationName), `-- Migration number: ${nextMigrationNumber} \t ${new Date().toISOString()}\n`)
 
-    consola.success(`Created migration file \`server/migrations/${migrationName}\``)
+    consola.success(`Created migration file \`server/database/migrations/${migrationName}\``)
   }
 });
diff --git a/src/commands/database/migrations/list.mjs b/src/commands/database/migrations/list.mjs
index d4a2f8f..b0e3b15 100644
--- a/src/commands/database/migrations/list.mjs
+++ b/src/commands/database/migrations/list.mjs
@@ -1,8 +1,9 @@
 import ora from 'ora'
 import { defineCommand, runCommand } from 'citty'
+import { join, relative } from 'pathe'
 import { consola } from 'consola'
 import { colors } from 'consola/utils'
-import { fetchUser, fetchProject, projectPath, getProjectEnv, fetchRemoteMigrations, getMigrationFiles } from '../../../utils/index.mjs'
+import { fetchUser, fetchProject, projectPath, getProjectEnv, fetchRemoteMigrations, getMigrationsDir, getMigrationFiles } from '../../../utils/index.mjs'
 import link from '../../link.mjs'
 import login from '../../login.mjs'
 
@@ -37,7 +38,7 @@ export default defineCommand({
     const total = localMigrations.length
 
     if (total === 0) {
-      consola.info('No migrations found in `./server/database/migrations`, please create one first.')
+      consola.info('No migrations found, please create one first with `nuxthub database migrations create <name>`.')
       return process.exit(0)
     }
 
@@ -103,10 +104,11 @@ export default defineCommand({
     const formattedPendingMigrations = pendingMigrations.map(fileName => ({ id: null, name: fileName, applied_at: null }))
     const migrations = remoteMigrations.concat(formattedPendingMigrations)
 
+    const migrationsDir = relative(process.cwd(), getMigrationsDir())
     for (const { name, applied_at } of migrations) {
       const appliedAt = applied_at ? new Date(applied_at).toLocaleString() : 'Pending'
       const color = applied_at ? colors.green : colors.yellow
-      consola.log(`${color(applied_at ? '✅' : '🕒')} \`./server/database/migrations/${name}.sql\` ${colors.gray(appliedAt)}`)
+      consola.log(`${color(applied_at ? '✅' : '🕒')} \`${join(migrationsDir, name)}.sql\` ${colors.gray(appliedAt)}`)
     }
 
     process.exit(0)
diff --git a/src/commands/database/migrations/mark-all-applied.mjs b/src/commands/database/migrations/mark-all-applied.mjs
index 206ef87..8d0c973 100644
--- a/src/commands/database/migrations/mark-all-applied.mjs
+++ b/src/commands/database/migrations/mark-all-applied.mjs
@@ -39,7 +39,7 @@ export default defineCommand({
     const total = localMigrations.length
 
     if (total === 0) {
-      consola.info('No migrations found in `./server/database/migrations`, please create one first.')
+      consola.info('No migrations found, please create one first with `nuxthub database migrations create <name>`.')
       return process.exit(0)
     }
 
diff --git a/src/commands/deploy.mjs b/src/commands/deploy.mjs
index 9917ec9..8eeb20c 100644
--- a/src/commands/deploy.mjs
+++ b/src/commands/deploy.mjs
@@ -221,18 +221,18 @@ export default defineCommand({
 
     spinner.succeed(`Deployed ${colors.blueBright(linkedProject.slug)} to ${deployEnvColored}...`)
 
-    // #region Database migrations
     if (config.database) {
-      const remoteMigrationsSpinner = ora(`Retrieving migrations on ${deployEnvColored} for ${colors.blueBright(linkedProject.slug)}...`).start()
+      // #region Database migrations
+      const remoteMigrationsSpinner = ora(`Retrieving database migrations on ${deployEnvColored} for ${colors.blueBright(linkedProject.slug)}...`).start()
 
       await createMigrationsTable({ env: deployEnv })
 
       const remoteMigrations = await fetchRemoteMigrations({ env: deployEnv }).catch((error) => {
-        remoteMigrationsSpinner.fail(`Could not retrieve migrations on ${deployEnvColored} for ${colors.blueBright(linkedProject.slug)}.`)
+        remoteMigrationsSpinner.fail(`Could not retrieve database migrations on ${deployEnvColored} for ${colors.blueBright(linkedProject.slug)}.`)
         consola.error(error.message)
         process.exit(1)
       })
-      remoteMigrationsSpinner.succeed(`Found ${remoteMigrations.length} migration${remoteMigrations.length === 1 ? '' : 's'} on ${colors.blueBright(linkedProject.slug)}`)
+      remoteMigrationsSpinner.succeed(`Found ${remoteMigrations.length} database migration${remoteMigrations.length === 1 ? '' : 's'} on ${colors.blueBright(linkedProject.slug)}`)
 
       const localMigrations = fileKeys
         .filter(fileKey => {
@@ -246,10 +246,10 @@ export default defineCommand({
             .replace('.sql', '')
         })
       const pendingMigrations = localMigrations.filter(localName => !remoteMigrations.find(({ name }) => name === localName))
-      if (!pendingMigrations.length) consola.info('No pending migrations to apply.')
+      if (!pendingMigrations.length) consola.info('No pending database migrations to apply.')
 
       for (const migration of pendingMigrations) {
-        const migrationSpinner = ora(`Applying migration ${colors.blueBright(migration)}...`).start()
+        const migrationSpinner = ora(`Applying database migration ${colors.blueBright(migration)}...`).start()
 
         let query = await storage.getItem(`database/migrations/${migration}.sql`)
 
@@ -261,14 +261,41 @@ export default defineCommand({
         try {
           await queryDatabase({ env: deployEnv, query })
         } catch (error) {
-          migrationSpinner.fail(`Failed to apply migration ${colors.blueBright(migration)}.`)
+          migrationSpinner.fail(`Failed to apply database migration ${colors.blueBright(migration)}.`)
 
           if (error) consola.error(error.response?._data?.message || error.message)
           break
         }
 
-        migrationSpinner.succeed(`Applied migration ${colors.blueBright(migration)}.`)
+        migrationSpinner.succeed(`Applied database migration ${colors.blueBright(migration)}.`)
       }
+      // #endregion
+      // #region Database queries
+      const localQueries = fileKeys
+        .filter(fileKey => fileKey.startsWith('database:queries:') && fileKey.endsWith('.sql'))
+        .map(fileKey => fileKey.replace('database:queries:', '').replace('.sql', ''))
+
+
+      if (localQueries.length) {
+        const querySpinner = ora(`Applying ${colors.blueBright(formatNumber(localQueries.length))} database queries...`).start()
+        for (const queryName of localQueries) {
+          const query = await storage.getItem(`database/queries/${queryName}.sql`)
+
+          try {
+            await queryDatabase({ env: deployEnv, query })
+          } catch (error) {
+            querySpinner.fail(`Failed to apply database query ${colors.blueBright(queryName)}.`)
+
+            if (error) consola.error(error.response?._data?.message || error.message)
+            break
+          }
+
+        }
+        querySpinner.succeed(`Applied ${colors.blueBright(formatNumber(localQueries.length))} database queries.`)
+      } else {
+        consola.info('No pending database queries to apply.')
+      }
+        // #endregion
     }
 
     // Check DNS & ready url for first deployment
diff --git a/src/commands/preview.mjs b/src/commands/preview.mjs
index ab3ea0c..984f06f 100644
--- a/src/commands/preview.mjs
+++ b/src/commands/preview.mjs
@@ -42,7 +42,7 @@ export default defineCommand({
       fileSideEffects.push(devVarsPath)
     }
 
-    const wrangler = generateWrangler(hubConfig, nitroConfig)
+    const wrangler = generateWrangler(hubConfig, { preset: nitroConfig.preset })
     const wranglerPath = join(distDir, 'wrangler.toml')
     consola.info(`Generating \`${relative(process.cwd(), wranglerPath)}\`...`)
     fileSideEffects.push(wranglerPath)
diff --git a/src/internal.mjs b/src/internal.mjs
index d1f8626..7c174c0 100644
--- a/src/internal.mjs
+++ b/src/internal.mjs
@@ -1 +1,3 @@
 export { getStorage, getPathsToDeploy, getPublicFiles, uploadAssetsToCloudflare, isMetaPath, getFile, isServerPath } from './utils/deploy.mjs';
+export { CreateDatabaseMigrationsTableQuery, ListDatabaseMigrationsQuery } from './utils/database.mjs';
+export { generateWrangler } from './utils/wrangler.mjs';
diff --git a/src/utils/database.mjs b/src/utils/database.mjs
index baf572b..ce520c2 100644
--- a/src/utils/database.mjs
+++ b/src/utils/database.mjs
@@ -1,11 +1,11 @@
 import { consola } from 'consola'
 import { join } from 'pathe'
+import { existsSync } from 'node:fs'
 import { createStorage } from 'unstorage'
 import fsDriver from 'unstorage/drivers/fs'
 import { $api } from './data.mjs'
 import { $fetch } from 'ofetch'
 
-
 export async function queryDatabase({ env, url, token, query, params }) {
   if (url) {
     return queryRemoteDatabase({ url, token, query, params })
@@ -40,6 +40,14 @@ export async function queryRemoteDatabase({ url, token, query, params })  {
   })
 }
 
+let _migrationsDir
+export function getMigrationsDir() {
+  if (!_migrationsDir) {
+    const cwd = process.cwd()
+    _migrationsDir = existsSync(join(cwd, '.data/hub/database/migrations')) ? join(cwd, '.data/hub/database/migrations') : join(cwd, 'server/database/migrations')
+  }
+  return _migrationsDir
+}
 
 /**
  * @type {import('unstorage').Storage}
@@ -47,13 +55,11 @@ export async function queryRemoteDatabase({ url, token, query, params })  {
 let _storage
 export function useMigrationsStorage() {
   if (!_storage) {
-    const cwd = process.cwd()
-    const migrationsDir = join(cwd, 'server/database/migrations')
     _storage = createStorage({
       driver: fsDriver({
-        base: migrationsDir,
+        base: getMigrationsDir(),
         ignore: ['.DS_Store']
-      }),
+      })
     })
   }
   return _storage
@@ -72,24 +78,25 @@ export async function getNextMigrationNumber() {
     .sort((a, b) => a - b)
     .pop() ?? 0
 
-  return (lastSequentialMigrationNumber + 1).toString().padStart(4, '0')
+    return (lastSequentialMigrationNumber + 1).toString().padStart(4, '0')
 }
 
-const CreateMigrationsTableQuery = `CREATE TABLE IF NOT EXISTS _hub_migrations (
+export const CreateDatabaseMigrationsTableQuery = `CREATE TABLE IF NOT EXISTS _hub_migrations (
     id         INTEGER PRIMARY KEY AUTOINCREMENT,
     name       TEXT UNIQUE,
     applied_at TIMESTAMP DEFAULT CURRENT_TIMESTAMP NOT NULL
 );`
+export const ListDatabaseMigrationsQuery = 'select "id", "name", "applied_at" from "_hub_migrations" order by "_hub_migrations"."id"'
+
 export async function createMigrationsTable({ env, url, token }) {
-  await queryDatabase({ env, url, token, query: CreateMigrationsTableQuery })
+  await queryDatabase({ env, url, token, query: CreateDatabaseMigrationsTableQuery })
 }
 
 /**
  * @type {Promise<Array<{ id: number, name: string, applied_at: string }>>}
  */
 export async function fetchRemoteMigrations({ env, url, token }) {
-  const query = 'select "id", "name", "applied_at" from "_hub_migrations" order by "_hub_migrations"."id"'
-  const res = await queryDatabase({ env, url, token, query }).catch((error) => {
+  const res = await queryDatabase({ env, url, token, query: ListDatabaseMigrationsQuery }).catch((error) => {
     if (error.response?._data?.message.includes('no such table')) {
       return []
     }
diff --git a/src/utils/wrangler.mjs b/src/utils/wrangler.mjs
index 591e417..afeffba 100644
--- a/src/utils/wrangler.mjs
+++ b/src/utils/wrangler.mjs
@@ -2,15 +2,15 @@ import { stringifyTOML } from 'confbox'
 
 // Taken from https://github.com/nuxt-hub/core/blob/main/src/utils/wrangler.ts
 // With some modifications to fit the needs of this project
-export function generateWrangler(hub, nitro) {
+export function generateWrangler(hub, { preset } = {}) {
   const wrangler = {}
 
   // Workers specific settings
-  if (nitro.preset === 'cloudflare-module' || nitro.preset === 'cloudflare-durable') {
+  if (preset === 'cloudflare-module' || preset === 'cloudflare-durable') {
     wrangler.name = 'nuxthub-local-preview'
     wrangler.main = './server/index.mjs'
     wrangler.assets = { directory: './public/', binding: 'ASSETS' }
-    if (nitro.preset === 'cloudflare-durable') {
+    if (preset === 'cloudflare-durable') {
       wrangler.durable_objects ||= {}
       wrangler.durable_objects.bindings = [{ name: '$DurableObject', class_name: '$DurableObject' }]
       wrangler.migrations = [{ tag: 'v1', new_classes: ['$DurableObject'] }]