Repositories list

• uno-choice-plugin

  Public
  This plug-in is being maintained in the Jenkins community now, as Active Choices Plug-in

  Java

  •

  MIT License

  •128•33•0•0•Updated Nov 2, 2024Nov 2, 2024

• pbs-plugin

  Public
  Jenkins PBS plug-in

  Java

  •2•9•10•0•Updated Oct 3, 2024Oct 3, 2024

• figshare-java-api

  Public
  A Java API to interface with the FigShare API.

  Java

  •

  MIT License

  •1•1•0•3•Updated Oct 3, 2024Oct 3, 2024

• mega-pairwise-distance-matrix2column

  Public
  MEGA pairwise distance matrix2column

  Java

  •0•1•1•1•Updated Oct 3, 2024Oct 3, 2024

• drmaa-java

  Public
  Java implementation for DRMAA applications

  Java

  •

  MIT License

  •0•2•2•2•Updated Oct 3, 2024Oct 3, 2024

• figtree-plugin

  Public
  FigTree is designed as a graphical viewer of phylogenetic trees and as a program for producing publication-ready figures. As with most of my programs, it was written for my own needs so may not be as polished and feature-complete as a commercial program. In particular it is designed to display summarized and annotated trees produced by BEAST.

  Java

  •0•1•0•1•Updated Oct 3, 2024Oct 3, 2024

• drmaa-pbs

  Public
  DRMAA PBS Java API, using command executions like qsub and qstat

  Java

  •

  MIT License

  •1•4•1•0•Updated Oct 3, 2024Oct 3, 2024

• pbs-java-api

  Public
  PBS Java API

  Java

  •

  MIT License

  •7•9•2•0•Updated Oct 3, 2024Oct 3, 2024

• biouno.github.io

  Public
  BioUno web site

  bioinformaticspipelinescientific-computing+ 4software-engineeringworkflowslifesciencelifesciences

  1•2•8•0•Updated Apr 14, 2024Apr 14, 2024

• distruct-plugin

  Public
  Distruct plug-in for Jenkins

  Java

  •0•1•0•0•Updated May 24, 2022May 24, 2022

• pbs4java

  Public
  Fork of pbs4java

  Java

  •

  GNU General Public License v3.0

  •2•1•0•0•Updated Oct 12, 2020Oct 12, 2020

• r-plugin

  Public
  r-plugin

  Java

  •7•1•0•0•Updated Jun 13, 2020Jun 13, 2020

• image-gallery-plugin

  Public
  Jenkins Plug-in for displaying galleries of images from a job workspace

  JavaScript

  •

  MIT License

  •7•2•0•0•Updated Nov 30, 2019Nov 30, 2019

• iiif.io

  Public
  IIIF Website, contexts, and source of specifications documents

  HTML

  •54•0•0•0•Updated Jul 27, 2017Jul 27, 2017

• minimal-mistakes

  Public
  📐 A flexible two-column Jekyll theme. Perfect for personal sites, blogs, and portfolios hosted on GitHub or your own server.

  CSS

  •

  MIT License

  •26k•0•0•0•Updated Jul 8, 2017Jul 8, 2017

• jenkins-update-center

  Public
  BioUno Jenkins update center

  HTML

  •0•1•0•0•Updated Apr 28, 2017Apr 28, 2017

• backend-update-center2

  Public
  Update center backend

  Java

  •265•1•0•0•Updated Apr 28, 2017Apr 28, 2017

• scriptler-plugin

  Public
  Jenkins scriptler plugin

  Java

  •60•0•0•0•Updated Mar 11, 2017Mar 11, 2017

• dynamicparameter-plugin

  Public
  Jenkins-CI plugin allowing dynamically generated build parameter default values

  Java

  •

  Other

  •29•0•0•0•Updated Mar 10, 2017Mar 10, 2017

• jenkins-biouno-examples

  Public
  Examples for Jenkins

  Java

  •0•0•0•0•Updated Mar 5, 2017Mar 5, 2017

• cantaloupe

  Public
  High-performance dynamic IIIF image server in Java

  Java

  •

  Other

  •111•0•0•0•Updated Dec 2, 2016Dec 2, 2016

• cmake_training

  Public
  Examples showing how to use CMake

  CMake

  •

  BSD 2-Clause "Simplified" License

  •3•0•0•0•Updated Nov 17, 2016Nov 17, 2016

• nodelabelparameter-plugin

  Public
  a jenkins plugin supporting dynamic label assignment

  Java

  •54•0•0•0•Updated Oct 28, 2016Oct 28, 2016

• Jenkins-LSCI

  Public
  Jenkins for Life Science Continuous Integration

  Groovy

  •

  Other

  •4•0•0•0•Updated Oct 11, 2016Oct 11, 2016

• SimpleAnnotationServer

  Public
  A simple IIIF and Mirador compatiable Annotation Server

  JavaScript

  •

  Apache License 2.0

  •28•0•0•0•Updated Oct 8, 2016Oct 8, 2016

• gridscale

  Public
  Scala library for accessing various file, batch systems, job schedulers and grid middlewares.

  Java

  •8•0•0•0•Updated Jul 15, 2016Jul 15, 2016

• reproducibility-guide

  Public
  HTML

  •53•1•0•0•Updated Jun 22, 2016Jun 22, 2016

• clumpp-plugin

  Public
  Java

  •0•1•0•0•Updated Jan 31, 2016Jan 31, 2016

• database-sparql-plugin

  Public
  Adds SPARQL connectivity to the database plugin

  Java

  •

  MIT License

  •0•0•0•0•Updated Dec 24, 2015Dec 24, 2015

• cellprofiler-docker

  Public
  Makefile

  •10•1•0•0•Updated Oct 29, 2015Oct 29, 2015