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    14 repositories

    • Pattern_Continuation

      Public
      C
      •
      GNU General Public License v3.0
      •1•0•0•0•Updated Oct 11, 2025Oct 11, 2025

    • quantitative-trait-distributions

      Public
      Code repository for "Quantitative metrics for trait and identity distributions" (2025)
      Jupyter Notebook
      •
      MIT License
      •0•0•0•0•Updated Jul 13, 2025Jul 13, 2025

    • OT-Velocity

      Public
      Jupyter Notebook
      •
      GNU General Public License v3.0
      •3•4•0•0•Updated Feb 19, 2025Feb 19, 2025

    • Weighted_Spiral_Spectra

      Public
      MATLAB
      •
      GNU General Public License v3.0
      •0•0•0•0•Updated May 2, 2024May 2, 2024

    • Stability-FHN-Oscillatory-Pulses

      Public
      Matlab code to reproduce computations in [Carter, de Rijk, and Sandstede 2016].
      MATLAB
      •
      GNU General Public License v3.0
      •0•0•0•0•Updated Aug 18, 2023Aug 18, 2023

    • Context_Specific_Network_Generation

      Public
      MATLAB
      •
      BSD 3-Clause "New" or "Revised" License
      •0•1•0•0•Updated May 3, 2023May 3, 2023

    • Quantifying_Zebrafish_Patterns

      Public
      Code for quantifying spots and stripes using topological data analysis and machine learning
      MATLAB
      •
      GNU General Public License v3.0
      •2•7•0•0•Updated May 3, 2023May 3, 2023

    • Spiral-Waves-Linear-Nonlinear-Theory

      Public
      EZ-Spiral and Matlab code to reproduce computations in [Sandstede & Scheel (2023)].
      numerical-computationspiral-wave
      numerical-computationspiral-wave
      MATLAB
      •
      GNU General Public License v3.0
      •3•2•0•0•Updated May 3, 2023May 3, 2023

    • Equation-free-modeling

      Public
      Enabling equation-free modeling via diffusion maps
      Jupyter Notebook
      •
      MIT License
      •0•0•0•0•Updated Dec 20, 2021Dec 20, 2021

    • Auto07p

      Public
      References, installation guide, and tutorial on "spatial pattern formation"
      auto07pspatial-patterns
      auto07pspatial-patterns
      Fortran
      •
      GNU General Public License v3.0
      •5•8•0•0•Updated Aug 26, 2021Aug 26, 2021

    • Online-Notes

      Public
      Collection of brief notes on travelling waves
      Creative Commons Attribution 4.0 International
      •0•1•0•0•Updated Jan 4, 2020Jan 4, 2020

    • Spiral-Waves-Boundary-Sinks-and-Spectra

      Public
      Matlab code to reproduce computations in [Dodson and Sandstede (2019)].
      numerical-computationspiral-wave
      numerical-computationspiral-wave
      MATLAB
      •
      GNU General Public License v3.0
      •1•1•0•0•Updated Jan 4, 2020Jan 4, 2020

    • Radial-Roll-Patterns

      Public
      Auto07p code to reproduce computations in [Bramburger et al. SIADS 18 (2019) 1420-1453]
      auto07p
      auto07p
      Jupyter Notebook
      •
      GNU General Public License v3.0
      •1•2•0•0•Updated Jan 4, 2020Jan 4, 2020

    • PEGASUS-WINGS

      Public
      MATLAB
      •
      Other
      •1•0•0•0•Updated May 18, 2019May 18, 2019
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