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CaviTracer - refactor for enhanced accuracy and speed of channel identification to be competitive with established SOTA tools CI #2138: Pull request #2249 synchronize by karolamik13
10m 15s briza81:channels-refactor
briza81:channels-refactor
10m 15s
Merge pull request #2248 from prody/copilot/account-for-extended-pdb-ids CI #2136: Commit a4ca149 pushed by jamesmkrieger
11m 21s main
main
11m 21s
Merge pull request #2242 from prody/copilot/fix-valueerror-when-parsi… CI #2135: Commit f74421a pushed by jamesmkrieger
10m 45s main
main
10m 45s
Merge pull request #2243 from prody/copilot/feature-request-correct-a… CI #2133: Commit 458ce04 pushed by jamesmkrieger
15m 44s main
main
15m 44s
Use PDB MODRES records for correct ncAA → canonical AA conversion in parsePDBHeader CI #2132: Pull request #2243 synchronize by jamesmkrieger
14m 53s copilot/feature-request-correct-aa-code-conversion
copilot/feature-request-correct-aa-code-conversion
14m 53s
Merge pull request #2250 from prody/copilot/use-pdb-modres-conversion CI #2131: Commit 3ff1959 pushed by jamesmkrieger
8m 27s copilot/feature-request-correct-aa-code-conversion
copilot/feature-request-correct-aa-code-conversion
8m 27s
Use PDB MODRES records for correct ncAA → canonical AA conversion in parsePDBHeader CI #2130: Pull request #2250 synchronize by Copilot AI
8m 15s copilot/use-pdb-modres-conversion
copilot/use-pdb-modres-conversion
8m 15s
fix: add MODRES line for 6L3 ligand in pdb5fc2_sep_modres.pdb fixture CI #2129: Commit 1ed3ab6 pushed by Copilot AI
12m 53s copilot/use-pdb-modres-conversion
copilot/use-pdb-modres-conversion
12m 53s
CaviTracer - refactor for enhanced accuracy and speed of channel identification to be competitive with established SOTA tools CI #2123: Pull request #2249 opened by briza81
8m 33s briza81:channels-refactor
briza81:channels-refactor
8m 33s
Use PDB MODRES records for correct ncAA → canonical AA conversion in parsePDBHeader CI #2122: Pull request #2243 synchronize by Copilot AI
5m 6s copilot/feature-request-correct-aa-code-conversion
copilot/feature-request-correct-aa-code-conversion
5m 6s
fix: drop .gitignore exception for MODRES fixture CI #2121: Commit b8cbcf6 pushed by Copilot AI
4m 26s copilot/feature-request-correct-aa-code-conversion
copilot/feature-request-correct-aa-code-conversion
4m 26s
Fix integer type mismatch in get_KDTree_indices causing RuntimeError on Windows CI #2120: Pull request #2244 synchronize by Copilot AI
43m 31s copilot/fix-inferbonds-runtime-exception
copilot/fix-inferbonds-runtime-exception
43m 31s
Make bioexcel tests optional (skip unless PRODY_BIOEXCEL_TESTS=1) CI #2119: Commit 35dadde pushed by Copilot AI
30m 39s copilot/fix-inferbonds-runtime-exception
copilot/fix-inferbonds-runtime-exception
30m 39s
Support extended PDB IDs across download and mirror resolution paths CI #2114: Pull request #2248 synchronize by Copilot AI
22m 43s copilot/account-for-extended-pdb-ids
copilot/account-for-extended-pdb-ids
22m 43s
Handle extended PDB IDs in fetch and mirror paths CI #2113: Commit e372069 pushed by Copilot AI
14m 25s copilot/account-for-extended-pdb-ids
copilot/account-for-extended-pdb-ids
14m 25s
Support atoms in showOccupancies CI #2111: Pull request #2246 synchronize by Copilot AI
39m 33s copilot/show-occupancies-support-atoms-kwarg
copilot/show-occupancies-support-atoms-kwarg
39m 33s
fix: support atoms in showOccupancies CI #2110: Commit 8921b5d pushed by Copilot AI
35m 25s copilot/show-occupancies-support-atoms-kwarg
copilot/show-occupancies-support-atoms-kwarg
35m 25s
Use PDB MODRES records for correct ncAA → canonical AA conversion in parsePDBHeader CI #2108: Pull request #2243 synchronize by Copilot AI
12m 38s copilot/feature-request-correct-aa-code-conversion
copilot/feature-request-correct-aa-code-conversion
12m 38s
fix: use AAMAP.get() with X fallback in _getUnobservedSeq (issue #2174) CI #2107: Commit 6d405d0 pushed by Copilot AI
15m 24s copilot/feature-request-correct-aa-code-conversion
copilot/feature-request-correct-aa-code-conversion
15m 24s
Fix writeNMD residue number overflow for large systems (>9999 residues) CI #2106: Pull request #2245 synchronize by Copilot AI
49m 51s copilot/fix-system-size-limitation
copilot/fix-system-size-limitation
49m 51s
Fix writeNMD for large systems: renumber residues > 9999 for NMWiz/VM… CI #2105: Commit 164a3d0 pushed by Copilot AI
23m 19s copilot/fix-system-size-limitation
copilot/fix-system-size-limitation
23m 19s
Fix integer type mismatch in get_KDTree_indices causing RuntimeError on Windows CI #2104: Pull request #2244 synchronize by Copilot AI
27m 27s copilot/fix-inferbonds-runtime-exception
copilot/fix-inferbonds-runtime-exception
27m 27s
Fix integer type mismatch in get_KDTree_indices (issue #2173) CI #2103: Commit 692e02c pushed by Copilot AI
14m 47s copilot/fix-inferbonds-runtime-exception
copilot/fix-inferbonds-runtime-exception
14m 47s
Use PDB MODRES records for correct ncAA → canonical AA conversion in parsePDBHeader CI #2100: Pull request #2243 synchronize by Copilot AI
18m 3s copilot/feature-request-correct-aa-code-conversion
copilot/feature-request-correct-aa-code-conversion
18m 3s
fix: remove incorrect sequence caching in Chain.getSequence (issue #2… CI #2099: Commit 53ffce8 pushed by Copilot AI
16m 10s copilot/feature-request-correct-aa-code-conversion
copilot/feature-request-correct-aa-code-conversion
16m 10s