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env.txt
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absl-py==1.2.0
aiohttp==3.8.1
aiosignal==1.2.0
anndata==0.8.0
async-timeout==4.0.2
attrs==22.1.0
backcall ##@ file:///home/ktietz/src/ci/backcall_1611930011877/work
beautifulsoup4 #@ file:///tmp/build/80754af9/beautifulsoup4_1631874778482/work
biomart==0.9.2
Bottleneck ##@ file:///tmp/build/80754af9/bottleneck_1648028895253/work
brotlipy==0.7.0
cachetools==5.2.0
certifi #@ file:///opt/conda/conda-bld/certifi_1663615672595/work/certifi
cffi #@ file:///opt/conda/conda-bld/cffi_1642701102775/work
chardet #@ file:///tmp/build/80754af9/chardet_1607706746162/work
charset-normalizer #@ file:///tmp/build/80754af9/charset-normalizer_1630003229654/work
click==8.1.3
cloudpickle #@ file:///tmp/build/80754af9/cloudpickle_1632508026186/work
conda-content-trust #@ file:///tmp/build/80754af9/conda-content-trust_1617045594566/work
conda-package-handling #@ file:///tmp/build/80754af9/conda-package-handling_1618262148928/work
cryptography #@ file:///tmp/build/80754af9/cryptography_1639400846433/work
cycler #@ file:///home/conda/feedstock_root/build_artifacts/cycler_1635519461629/work
cytoolz==0.11.0
dask #@ file:///opt/conda/conda-bld/dask-core_1653082102769/work
decorator #@ file:///opt/conda/conda-bld/decorator_1643638310831/work
deepsnap==0.2.1
dgl==0.9.0
dnspython==2.2.1
docker-pycreds==0.4.0
einops==0.6.0
filelock #@ file:///opt/conda/conda-bld/filelock_1642510437405/work
fonttools==4.25.0
frozenlist==1.3.1
fsspec==2022.7.1
gitdb==4.0.9
GitPython==3.1.27
glob2 #@ file:///home/linux1/recipes/ci/glob2_1610991677669/work
google-auth==2.10.0
google-auth-oauthlib==0.4.6
graphviz==0.20.1
grpcio==1.47.0
gseapy==0.9.5
h5py==3.7.0
html5lib #@ file:///Users/ktietz/demo/mc3/conda-bld/html5lib_1629144453894/work
idna #@ file:///tmp/build/80754af9/idna_1637925883363/work
imageio #@ file:///tmp/build/80754af9/imageio_1617700267927/work
imgaug==0.4.0
importlib-metadata==4.12.0
iniconfig==1.1.1
install==1.3.5
ipython #@ file:///tmp/build/80754af9/ipython_1643818147236/work
jedi #@ file:///tmp/build/80754af9/jedi_1644315233700/work
Jinja2 #@ file:///tmp/build/80754af9/jinja2_1612213139570/work
joblib #@ file:///tmp/build/80754af9/joblib_1635411271373/work
jsonpickle==2.2.0
kiwisolver #@ file:///opt/conda/conda-bld/kiwisolver_1653292039266/work
libarchive-c #@ file:///tmp/build/80754af9/python-libarchive-c_1617780486945/work
lightning-bolts==0.5.0
local-attention==1.6.0
locket #@ file:///opt/conda/conda-bld/locket_1652903118915/work
lxml #@ file:///tmp/build/80754af9/lxml_1646625266987/work
Markdown==3.4.1
MarkupSafe==2.1.1
matplotlib #@ file:///tmp/build/80754af9/matplotlib-suite_1647441664166/work
matplotlib-inline #@ file:///tmp/build/80754af9/matplotlib-inline_1628242447089/work
mkl-fft==1.3.1
mkl-random #@ file:///tmp/build/80754af9/mkl_random_1626186064646/work
mkl-service==2.4.0
multidict==6.0.2
munkres==1.1.4
natsort==8.2.0
networkx==2.8.6
numexpr #@ file:///tmp/build/80754af9/numexpr_1640704208950/work
numpy #@ file:///tmp/build/80754af9/numpy_and_numpy_base_1634095647912/work
nystrom-attention==0.0.11
oauthlib==3.2.0
opencv-python==4.6.0.66
openslide-python==1.1.2
orca==1.7
packaging #@ file:///home/conda/feedstock_root/build_artifacts/packaging_1637239678211/work
pandas==1.4.3
parso #@ file:///opt/conda/conda-bld/parso_1641458642106/work
partd #@ file:///opt/conda/conda-bld/partd_1647245470509/work
pathtools==0.1.2
patsy==0.5.2
pexpect #@ file:///tmp/build/80754af9/pexpect_1605563209008/work
pickleshare #@ file:///tmp/build/80754af9/pickleshare_1606932040724/work
Pillow==9.0.1
pkginfo #@ file:///tmp/build/80754af9/pkginfo_1643162084911/work
pluggy==1.0.0
promise==2.3
prompt-toolkit #@ file:///tmp/build/80754af9/prompt-toolkit_1633440160888/work
protobuf==3.19.4
psutil #@ file:///tmp/build/80754af9/psutil_1612298023621/work
ptyprocess #@ file:///tmp/build/80754af9/ptyprocess_1609355006118/work/dist/ptyprocess-0.7.0-py2.py3-none-any.whl
py==1.11.0
pyasn1==0.4.8
pyasn1-modules==0.2.8
pycosat==0.6.3
pycparser #@ file:///tmp/build/80754af9/pycparser_1636541352034/work
pyDeprecate==0.3.2
pydot==1.4.2
Pygments #@ file:///opt/conda/conda-bld/pygments_1644249106324/work
pyOpenSSL #@ file:///tmp/build/80754af9/pyopenssl_1635333100036/work
pyparsing #@ file:///home/conda/feedstock_root/build_artifacts/pyparsing_1652235407899/work
pyreadr==0.4.6
PySnooper==1.1.1
PySocks #@ file:///tmp/build/80754af9/pysocks_1605305779399/work
pytest==7.1.3
python-dateutil #@ file:///home/conda/feedstock_root/build_artifacts/python-dateutil_1626286286081/work
python-etcd==0.4.5
python-louvain #@ file:///tmp/build/80754af9/python-louvain_1612304551119/work
pytorch-lightning==1.7.1
pytorch-toolbelt==0.5.1
pytz==2021.3
pyvis==0.2.1
PyWavelets #@ file:///tmp/build/80754af9/pywavelets_1648710120733/work
PyWGCNA==1.0.1
PyYAML==6.0
requests #@ file:///opt/conda/conda-bld/requests_1641824580448/work
requests-oauthlib==1.3.1
rsa==4.9
ruamel-yaml-conda #@ file:///tmp/build/80754af9/ruamel_yaml_1616016699510/work
scikit-image #@ file:///tmp/build/80754af9/scikit-image_1648196304918/work
scikit-learn #@ file:///tmp/build/80754af9/scikit-learn_1642617107864/work
scipy==1.9.1
seaborn==0.12.0
sentry-sdk==1.9.5
setproctitle==1.3.2
Shapely==1.8.2
shortuuid==1.0.9
sip==4.19.13
six #@ file:///tmp/build/80754af9/six_1623709665295/work
smmap==5.0.0
soupsieve #@ file:///tmp/build/80754af9/soupsieve_1636706018808/work
statsmodels==0.13.2
tables==3.7.0
tensorboard==2.10.0
tensorboard-data-server==0.6.1
tensorboard-plugin-wit==1.8.1
termcolor==1.1.0
threadpoolctl #@ file:///Users/ktietz/demo/mc3/conda-bld/threadpoolctl_1629802263681/work
tifffile==2022.8.12
timm==0.6.7
tomli==2.0.1
toolz #@ file:///tmp/build/80754af9/toolz_1636545406491/work
torch==1.11.0
torch-cluster #@ file:///usr/share/miniconda/envs/test/conda-bld/pytorch-cluster_1656603936427/work
torch-geometric #@ file:///usr/share/miniconda/envs/test/conda-bld/pyg_1647088965423/work
torch-scatter #@ file:///usr/share/miniconda/envs/test/conda-bld/pytorch-scatter_1656601000983/work
torch-sparse #@ file:///usr/share/miniconda/envs/test/conda-bld/pytorch-sparse_1656612839159/work
torch-spline-conv #@ file:///usr/share/miniconda/envs/test/conda-bld/pytorch-spline-conv_1656603861556/work
torchelastic==0.2.2
torchmetrics==0.9.3
TorchSnooper==0.8
torchtext==0.12.0
torchvision==0.12.0
tornado #@ file:///home/conda/feedstock_root/build_artifacts/tornado_1610094706440/work
tqdm #@ file:///tmp/build/80754af9/tqdm_1635330843403/work
traitlets #@ file:///tmp/build/80754af9/traitlets_1636710298902/work
typing_extensions==4.3.0
urllib3==1.26.12
wandb==0.13.2
wcwidth #@ file:///Users/ktietz/demo/mc3/conda-bld/wcwidth_1629357192024/work
webencodings==0.5.1
Werkzeug==2.2.2
yacs #@ file:///tmp/build/80754af9/yacs_1634047592950/work
yarl==1.8.1
zipp==3.8.1