Install assorthead devel before libscran/scrapper for macOS/Windows CI. #55
rworkflows.yml
on: push
docker-build-and-push
22m 41s
Matrix: rworkflows
Annotations
4 errors, 20 warnings, and 1 notice
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windows-latest (auto)
Process completed with exit code 1.
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windows-latest (auto)
Build process failed
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macOS-latest (auto)
Process completed with exit code 1.
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macOS-latest (auto)
Build process failed
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windows-latest (auto)
Node.js 20 actions are deprecated. The following actions are running on Node.js 20 and may not work as expected: actions/cache@v4, actions/upload-artifact@v4. Actions will be forced to run with Node.js 24 by default starting June 2nd, 2026. Node.js 20 will be removed from the runner on September 16th, 2026. Please check if updated versions of these actions are available that support Node.js 24. To opt into Node.js 24 now, set the FORCE_JAVASCRIPT_ACTIONS_TO_NODE24=true environment variable on the runner or in your workflow file. Once Node.js 24 becomes the default, you can temporarily opt out by setting ACTIONS_ALLOW_USE_UNSECURE_NODE_VERSION=true. For more information see: https://github.blog/changelog/2025-09-19-deprecation-of-node-20-on-github-actions-runners/
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windows-latest (auto)
No files were found with the provided path: check. No artifacts will be uploaded.
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windows-latest (auto)
dependencies 'BiocVersion', 'BiocStyle' are not available
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macOS-latest (auto)
Node.js 20 actions are deprecated. The following actions are running on Node.js 20 and may not work as expected: actions/cache@v4, actions/upload-artifact@v4. Actions will be forced to run with Node.js 24 by default starting June 2nd, 2026. Node.js 20 will be removed from the runner on September 16th, 2026. Please check if updated versions of these actions are available that support Node.js 24. To opt into Node.js 24 now, set the FORCE_JAVASCRIPT_ACTIONS_TO_NODE24=true environment variable on the runner or in your workflow file. Once Node.js 24 becomes the default, you can temporarily opt out by setting ACTIONS_ALLOW_USE_UNSECURE_NODE_VERSION=true. For more information see: https://github.blog/changelog/2025-09-19-deprecation-of-node-20-on-github-actions-runners/
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macOS-latest (auto)
No files were found with the provided path: check. No artifacts will be uploaded.
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macOS-latest (auto)
dependencies ‘BiocVersion’, ‘BiocStyle’ are not available
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macOS-latest (auto)
fribidi 1.0.16 is already installed and up-to-date.
To reinstall 1.0.16, run:
brew reinstall fribidi
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macOS-latest (auto)
harfbuzz 14.2.0 is already installed and up-to-date.
To reinstall 14.2.0, run:
brew reinstall harfbuzz
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docker-build-and-push
Node.js 20 actions are deprecated. The following actions are running on Node.js 20 and may not work as expected: actions/checkout@v4, docker/build-push-action@v5, docker/login-action@v3, docker/metadata-action@v5, docker/setup-buildx-action@v3. Actions will be forced to run with Node.js 24 by default starting June 2nd, 2026. Node.js 20 will be removed from the runner on September 16th, 2026. Please check if updated versions of these actions are available that support Node.js 24. To opt into Node.js 24 now, set the FORCE_JAVASCRIPT_ACTIONS_TO_NODE24=true environment variable on the runner or in your workflow file. Once Node.js 24 becomes the default, you can temporarily opt out by setting ACTIONS_ALLOW_USE_UNSECURE_NODE_VERSION=true. For more information see: https://github.blog/changelog/2025-09-19-deprecation-of-node-20-on-github-actions-runners/
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ubuntu-latest (auto)
Node.js 20 actions are deprecated. The following actions are running on Node.js 20 and may not work as expected: actions/cache@v4. Actions will be forced to run with Node.js 24 by default starting June 2nd, 2026. Node.js 20 will be removed from the runner on September 16th, 2026. Please check if updated versions of these actions are available that support Node.js 24. To opt into Node.js 24 now, set the FORCE_JAVASCRIPT_ACTIONS_TO_NODE24=true environment variable on the runner or in your workflow file. Once Node.js 24 becomes the default, you can temporarily opt out by setting ACTIONS_ALLOW_USE_UNSECURE_NODE_VERSION=true. For more information see: https://github.blog/changelog/2025-09-19-deprecation-of-node-20-on-github-actions-runners/
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ubuntu-latest (auto):
Session_1_sequencing_assays.Rmd#L208
[spelling] possible misspelling: analysing
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ubuntu-latest (auto):
Session_3_imaging_assays.Rmd#L29
[spelling] possible misspelling: analyse
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ubuntu-latest (auto):
Session_2_Tidy_spatial_analyses.Rmd#L258
[spelling] possible misspelling: ana
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ubuntu-latest (auto):
Session_1_sequencing_assays.Rmd#L1173
[spelling] possible misspelling: amongst
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ubuntu-latest (auto):
Solutions.Rmd#L557
[spelling] possible misspelling: al
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ubuntu-latest (auto):
Session_3_imaging_assays.Rmd#L125
[spelling] possible misspelling: al
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ubuntu-latest (auto):
Session_2_Tidy_spatial_analyses.Rmd#L49
[spelling] possible misspelling: al
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ubuntu-latest (auto):
Session_1_sequencing_assays.Rmd#L155
[spelling] possible misspelling: al
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ubuntu-latest (auto):
Session_3_imaging_assays.Rmd#L685
[spelling] possible misspelling: aimming
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ubuntu-latest (auto):
README.md#L10
[spelling] possible misspelling: adelaide
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windows-latest (auto)
NOTICE: windows-latest requests are being redirected to windows-2025-vs2026 by June 15, 2026
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