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Install assorthead devel before libscran/scrapper for macOS/Windows CI. #55

Install assorthead devel before libscran/scrapper for macOS/Windows CI.

Install assorthead devel before libscran/scrapper for macOS/Windows CI. #55

Triggered via push May 18, 2026 07:54
Status Failure
Total duration 50m 2s
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rworkflows.yml

on: push
docker-build-and-push
22m 41s
docker-build-and-push
Matrix: rworkflows
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4 errors, 20 warnings, and 1 notice
windows-latest (auto)
Process completed with exit code 1.
windows-latest (auto)
Build process failed
macOS-latest (auto)
Process completed with exit code 1.
macOS-latest (auto)
Build process failed
windows-latest (auto)
Node.js 20 actions are deprecated. The following actions are running on Node.js 20 and may not work as expected: actions/cache@v4, actions/upload-artifact@v4. Actions will be forced to run with Node.js 24 by default starting June 2nd, 2026. Node.js 20 will be removed from the runner on September 16th, 2026. Please check if updated versions of these actions are available that support Node.js 24. To opt into Node.js 24 now, set the FORCE_JAVASCRIPT_ACTIONS_TO_NODE24=true environment variable on the runner or in your workflow file. Once Node.js 24 becomes the default, you can temporarily opt out by setting ACTIONS_ALLOW_USE_UNSECURE_NODE_VERSION=true. For more information see: https://github.blog/changelog/2025-09-19-deprecation-of-node-20-on-github-actions-runners/
windows-latest (auto)
No files were found with the provided path: check. No artifacts will be uploaded.
windows-latest (auto)
dependencies 'BiocVersion', 'BiocStyle' are not available
macOS-latest (auto)
Node.js 20 actions are deprecated. The following actions are running on Node.js 20 and may not work as expected: actions/cache@v4, actions/upload-artifact@v4. Actions will be forced to run with Node.js 24 by default starting June 2nd, 2026. Node.js 20 will be removed from the runner on September 16th, 2026. Please check if updated versions of these actions are available that support Node.js 24. To opt into Node.js 24 now, set the FORCE_JAVASCRIPT_ACTIONS_TO_NODE24=true environment variable on the runner or in your workflow file. Once Node.js 24 becomes the default, you can temporarily opt out by setting ACTIONS_ALLOW_USE_UNSECURE_NODE_VERSION=true. For more information see: https://github.blog/changelog/2025-09-19-deprecation-of-node-20-on-github-actions-runners/
macOS-latest (auto)
No files were found with the provided path: check. No artifacts will be uploaded.
macOS-latest (auto)
dependencies ‘BiocVersion’, ‘BiocStyle’ are not available
macOS-latest (auto)
fribidi 1.0.16 is already installed and up-to-date. To reinstall 1.0.16, run: brew reinstall fribidi
macOS-latest (auto)
harfbuzz 14.2.0 is already installed and up-to-date. To reinstall 14.2.0, run: brew reinstall harfbuzz
docker-build-and-push
Node.js 20 actions are deprecated. The following actions are running on Node.js 20 and may not work as expected: actions/checkout@v4, docker/build-push-action@v5, docker/login-action@v3, docker/metadata-action@v5, docker/setup-buildx-action@v3. Actions will be forced to run with Node.js 24 by default starting June 2nd, 2026. Node.js 20 will be removed from the runner on September 16th, 2026. Please check if updated versions of these actions are available that support Node.js 24. To opt into Node.js 24 now, set the FORCE_JAVASCRIPT_ACTIONS_TO_NODE24=true environment variable on the runner or in your workflow file. Once Node.js 24 becomes the default, you can temporarily opt out by setting ACTIONS_ALLOW_USE_UNSECURE_NODE_VERSION=true. For more information see: https://github.blog/changelog/2025-09-19-deprecation-of-node-20-on-github-actions-runners/
ubuntu-latest (auto)
Node.js 20 actions are deprecated. The following actions are running on Node.js 20 and may not work as expected: actions/cache@v4. Actions will be forced to run with Node.js 24 by default starting June 2nd, 2026. Node.js 20 will be removed from the runner on September 16th, 2026. Please check if updated versions of these actions are available that support Node.js 24. To opt into Node.js 24 now, set the FORCE_JAVASCRIPT_ACTIONS_TO_NODE24=true environment variable on the runner or in your workflow file. Once Node.js 24 becomes the default, you can temporarily opt out by setting ACTIONS_ALLOW_USE_UNSECURE_NODE_VERSION=true. For more information see: https://github.blog/changelog/2025-09-19-deprecation-of-node-20-on-github-actions-runners/
ubuntu-latest (auto): Session_1_sequencing_assays.Rmd#L208
[spelling] possible misspelling: analysing
ubuntu-latest (auto): Session_3_imaging_assays.Rmd#L29
[spelling] possible misspelling: analyse
ubuntu-latest (auto): Session_2_Tidy_spatial_analyses.Rmd#L258
[spelling] possible misspelling: ana
ubuntu-latest (auto): Session_1_sequencing_assays.Rmd#L1173
[spelling] possible misspelling: amongst
ubuntu-latest (auto): Solutions.Rmd#L557
[spelling] possible misspelling: al
ubuntu-latest (auto): Session_3_imaging_assays.Rmd#L125
[spelling] possible misspelling: al
ubuntu-latest (auto): Session_2_Tidy_spatial_analyses.Rmd#L49
[spelling] possible misspelling: al
ubuntu-latest (auto): Session_1_sequencing_assays.Rmd#L155
[spelling] possible misspelling: al
ubuntu-latest (auto): Session_3_imaging_assays.Rmd#L685
[spelling] possible misspelling: aimming
ubuntu-latest (auto): README.md#L10
[spelling] possible misspelling: adelaide
windows-latest (auto)
NOTICE: windows-latest requests are being redirected to windows-2025-vs2026 by June 15, 2026