DESCRIPTION

Package: tidySpatialWorkshop2025
Title: Workshop Materials for Tidy Spatial Analysis
Version: 0.18.5
Authors@R: c(
    person("Stefano", "Mangiola", email = "mangiola.s@wehi.edu.au", role = c("aut", "cre"),
           comment = c(ORCID = "0000-0001-7474-836X")),
    person("Luciano", "Martelotto", email = "luciano.martelotto@adelaide.edu.au", role = "aut")
    )
Description: Workshop materials for learning tidy analysis of spatial transcriptomics data. 
    Includes example datasets and vignettes demonstrating the use of tidyomics tools for 
    spatial data analysis, covering both sequencing-based and imaging-based spatial transcriptomics.
License: MIT + file LICENSE
Encoding: UTF-8
LazyData: true
LazyDataCompression: xz
Roxygen: list(markdown = TRUE)
RoxygenNote: 7.3.2
biocViews: 
    Spatial,
    Transcriptomics,
    SingleCell,
    Software,
    Visualization
Depends:
    R (>= 4.3.0)
Imports:
    SpatialExperiment,
    tidySpatialExperiment,
    tidySummarizedExperiment,
    tidySingleCellExperiment,
    ggplot2,
    dplyr,
    tidyr,
    stringr,
    purrr,
    glue,
    scuttle,
    scater,
    scran,
    methods
Suggests:
    plotly,
    colorspace,
    dittoSeq,
    ggspavis,
    RColorBrewer,
    spatialLIBD,
    ExperimentHub,
    Banksy,
    Seurat,
    cowplot,
    scRNAseq,
    SPOTlight,
    SubcellularSpatialData,
    forcats,
    tibble,
    hoodscanR,
    scico,
    MoleculeExperiment,
    knitr,
    rmarkdown,
    here,
    igraph,
    magick,
    scatterpie,
    ggcorrplot
VignetteBuilder: knitr
URL: https://github.com/tidyomics/tidySpatialWorkshop2025
BugReports: https://github.com/tidyomics/tidySpatialWorkshop2025/issues