Hello,
I encountered an issue with the describe_transcript() function in tidybulk, where the description column is returned entirely as NA.
I followed the example provided in the documentation:
https://tidyomics.github.io/tidybulk/reference/describe_transcript-methods.html
Reproducible example:
## Load airway dataset for examples
data("airway", package = "airway")
## Ensure a 'condition' column exists for examples expecting it
SummarizedExperiment::colData(airway)$condition <-
SummarizedExperiment::colData(airway)$dex
## Run describe_transcript
desc_transcripts_airway <- describe_transcript(airway)
## Check number of non-NA descriptions
sum(!is.na(rowData(desc_transcripts_airway)$description))
Output:
Thank you.
Hello,
I encountered an issue with the describe_transcript() function in tidybulk, where the description column is returned entirely as NA.
I followed the example provided in the documentation:
https://tidyomics.github.io/tidybulk/reference/describe_transcript-methods.html
Reproducible example:
Output:
Thank you.