- Version: 0.1.0
- GitHub: NA
- Source code: https://github.com/cran/AovBay
- Date/Publication: 2021-07-22 06:30:02 UTC
- Number of recursive dependencies: 147
Run revdepcheck::cloud_details(, "AovBay") for more info
- checking whether package ‘AovBay’ can be installed ... ERROR
Installation failed. See ‘/tmp/workdir/AovBay/new/AovBay.Rcheck/00install.out’ for details.
* installing *source* package ‘AovBay’ ...
** package ‘AovBay’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C++ compiler: ‘g++ (Ubuntu 13.2.0-23ubuntu4) 13.2.0’
using C++17
g++ -std=gnu++17 -I"/opt/R/4.3.1/lib/R/include" -DNDEBUG -I"../inst/include" -I"/usr/local/lib/R/site-library/StanHeaders/include/src" -DBOOST_DISABLE_ASSERTS -DEIGEN_NO_DEBUG -DBOOST_MATH_OVERFLOW_ERROR_POLICY=errno_on_error -DUSE_STANC3 -D_HAS_AUTO_PTR_ETC=0 -I'/usr/local/lib/R/site-library/BH/include' -I'/usr/local/lib/R/site-library/Rcpp/include' -I'/usr/local/lib/R/site-library/RcppEigen/include' -I'/usr/local/lib/R/site-library/RcppParallel/include' -I'/usr/local/lib/R/site-library/rstan/include' -I'/usr/local/lib/R/site-library/StanHeaders/include' -I/usr/local/include -I'/usr/local/lib/R/site-library/RcppParallel/include' -D_REENTRANT -DSTAN_THREADS -fpic -g -O2 -c RcppExports.cpp -o RcppExports.o
In file included from /usr/local/lib/R/site-library/RcppEigen/include/Eigen/Core:205,
...
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
Error in loadNamespace(j <- i[[1L]], c(lib.loc, .libPaths()), versionCheck = vI[[j]]) :
namespace ‘Matrix’ 1.5-4.1 is being loaded, but >= 1.6.0 is required
Calls: <Anonymous> ... namespaceImportFrom -> asNamespace -> loadNamespace
Execution halted
ERROR: lazy loading failed for package ‘AovBay’
* removing ‘/tmp/workdir/AovBay/new/AovBay.Rcheck/AovBay’
* installing *source* package ‘AovBay’ ...
** package ‘AovBay’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C++ compiler: ‘g++ (Ubuntu 13.2.0-23ubuntu4) 13.2.0’
using C++17
g++ -std=gnu++17 -I"/opt/R/4.3.1/lib/R/include" -DNDEBUG -I"../inst/include" -I"/usr/local/lib/R/site-library/StanHeaders/include/src" -DBOOST_DISABLE_ASSERTS -DEIGEN_NO_DEBUG -DBOOST_MATH_OVERFLOW_ERROR_POLICY=errno_on_error -DUSE_STANC3 -D_HAS_AUTO_PTR_ETC=0 -I'/usr/local/lib/R/site-library/BH/include' -I'/usr/local/lib/R/site-library/Rcpp/include' -I'/usr/local/lib/R/site-library/RcppEigen/include' -I'/usr/local/lib/R/site-library/RcppParallel/include' -I'/usr/local/lib/R/site-library/rstan/include' -I'/usr/local/lib/R/site-library/StanHeaders/include' -I/usr/local/include -I'/usr/local/lib/R/site-library/RcppParallel/include' -D_REENTRANT -DSTAN_THREADS -fpic -g -O2 -c RcppExports.cpp -o RcppExports.o
In file included from /usr/local/lib/R/site-library/RcppEigen/include/Eigen/Core:205,
...
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
Error in loadNamespace(j <- i[[1L]], c(lib.loc, .libPaths()), versionCheck = vI[[j]]) :
namespace ‘Matrix’ 1.5-4.1 is being loaded, but >= 1.6.0 is required
Calls: <Anonymous> ... namespaceImportFrom -> asNamespace -> loadNamespace
Execution halted
ERROR: lazy loading failed for package ‘AovBay’
* removing ‘/tmp/workdir/AovBay/old/AovBay.Rcheck/AovBay’
- Version: 0.9.4
- GitHub: https://github.com/luckinet/arealDB
- Source code: https://github.com/cran/arealDB
- Date/Publication: 2025-01-20 13:40:05 UTC
- Number of recursive dependencies: 110
Run revdepcheck::cloud_details(, "arealDB") for more info
- checking whether package ‘arealDB’ can be installed ... ERROR
Installation failed. See ‘/tmp/workdir/arealDB/new/arealDB.Rcheck/00install.out’ for details.
* installing *source* package ‘arealDB’ ...
** package ‘arealDB’ successfully unpacked and MD5 sums checked
** using staged installation
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
Error in dyn.load(file, DLLpath = DLLpath, ...) :
unable to load shared object '/usr/local/lib/R/site-library/redland/libs/redland.so':
librdf.so.0: cannot open shared object file: No such file or directory
Calls: <Anonymous> ... asNamespace -> loadNamespace -> library.dynam -> dyn.load
Execution halted
ERROR: lazy loading failed for package ‘arealDB’
* removing ‘/tmp/workdir/arealDB/new/arealDB.Rcheck/arealDB’
* installing *source* package ‘arealDB’ ...
** package ‘arealDB’ successfully unpacked and MD5 sums checked
** using staged installation
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
Error in dyn.load(file, DLLpath = DLLpath, ...) :
unable to load shared object '/usr/local/lib/R/site-library/redland/libs/redland.so':
librdf.so.0: cannot open shared object file: No such file or directory
Calls: <Anonymous> ... asNamespace -> loadNamespace -> library.dynam -> dyn.load
Execution halted
ERROR: lazy loading failed for package ‘arealDB’
* removing ‘/tmp/workdir/arealDB/old/arealDB.Rcheck/arealDB’
- Version: 0.3.3
- GitHub: https://github.com/cardiomoon/autoReg
- Source code: https://github.com/cran/autoReg
- Date/Publication: 2023-11-14 05:53:27 UTC
- Number of recursive dependencies: 215
Run revdepcheck::cloud_details(, "autoReg") for more info
* using log directory ‘/tmp/workdir/autoReg/new/autoReg.Rcheck’
* using R version 4.3.1 (2023-06-16)
* using platform: x86_64-pc-linux-gnu (64-bit)
* R was compiled by
gcc (Ubuntu 13.2.0-23ubuntu4) 13.2.0
GNU Fortran (Ubuntu 13.2.0-23ubuntu4) 13.2.0
* running under: Ubuntu 24.04.1 LTS
* using session charset: UTF-8
* using option ‘--no-manual’
* checking for file ‘autoReg/DESCRIPTION’ ... OK
...
* checking package vignettes in ‘inst/doc’ ... OK
* checking running R code from vignettes ... OK
‘Automatic_Regression_Modeling.Rmd’ using ‘UTF-8’... OK
‘Bootstrap_Prediction.Rmd’ using ‘UTF-8’... OK
‘Getting_started.Rmd’ using ‘UTF-8’... OK
‘Statiastical_test_in_gaze.Rmd’ using ‘UTF-8’... OK
‘Survival.Rmd’ using ‘UTF-8’... OK
* checking re-building of vignette outputs ... OK
* DONE
Status: OK
* using log directory ‘/tmp/workdir/autoReg/old/autoReg.Rcheck’
* using R version 4.3.1 (2023-06-16)
* using platform: x86_64-pc-linux-gnu (64-bit)
* R was compiled by
gcc (Ubuntu 13.2.0-23ubuntu4) 13.2.0
GNU Fortran (Ubuntu 13.2.0-23ubuntu4) 13.2.0
* running under: Ubuntu 24.04.1 LTS
* using session charset: UTF-8
* using option ‘--no-manual’
* checking for file ‘autoReg/DESCRIPTION’ ... OK
...
* checking package vignettes in ‘inst/doc’ ... OK
* checking running R code from vignettes ... OK
‘Automatic_Regression_Modeling.Rmd’ using ‘UTF-8’... OK
‘Bootstrap_Prediction.Rmd’ using ‘UTF-8’... OK
‘Getting_started.Rmd’ using ‘UTF-8’... OK
‘Statiastical_test_in_gaze.Rmd’ using ‘UTF-8’... OK
‘Survival.Rmd’ using ‘UTF-8’... OK
* checking re-building of vignette outputs ... OK
* DONE
Status: OK
- Version: 0.99.3
- GitHub: https://github.com/thevaachandereng/bayesCT
- Source code: https://github.com/cran/bayesCT
- Date/Publication: 2020-07-01 09:30:02 UTC
- Number of recursive dependencies: 121
Run revdepcheck::cloud_details(, "bayesCT") for more info
- checking whether package ‘bayesCT’ can be installed ... ERROR
Installation failed. See ‘/tmp/workdir/bayesCT/new/bayesCT.Rcheck/00install.out’ for details.
* installing *source* package ‘bayesCT’ ...
** package ‘bayesCT’ successfully unpacked and MD5 sums checked
** using staged installation
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
Error in loadNamespace(j <- i[[1L]], c(lib.loc, .libPaths()), versionCheck = vI[[j]]) :
namespace ‘Matrix’ 1.5-4.1 is already loaded, but >= 1.6.0 is required
Calls: <Anonymous> ... namespaceImportFrom -> asNamespace -> loadNamespace
Execution halted
ERROR: lazy loading failed for package ‘bayesCT’
* removing ‘/tmp/workdir/bayesCT/new/bayesCT.Rcheck/bayesCT’
* installing *source* package ‘bayesCT’ ...
** package ‘bayesCT’ successfully unpacked and MD5 sums checked
** using staged installation
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
Error in loadNamespace(j <- i[[1L]], c(lib.loc, .libPaths()), versionCheck = vI[[j]]) :
namespace ‘Matrix’ 1.5-4.1 is already loaded, but >= 1.6.0 is required
Calls: <Anonymous> ... namespaceImportFrom -> asNamespace -> loadNamespace
Execution halted
ERROR: lazy loading failed for package ‘bayesCT’
* removing ‘/tmp/workdir/bayesCT/old/bayesCT.Rcheck/bayesCT’
- Version: 1.0.1
- GitHub: https://github.com/statjs/bspcov
- Source code: https://github.com/cran/bspcov
- Date/Publication: 2024-11-13 20:10:02 UTC
- Number of recursive dependencies: 111
Run revdepcheck::cloud_details(, "bspcov") for more info
- checking whether package ‘bspcov’ can be installed ... ERROR
Installation failed. See ‘/tmp/workdir/bspcov/new/bspcov.Rcheck/00install.out’ for details.
* installing *source* package ‘bspcov’ ...
** package ‘bspcov’ successfully unpacked and MD5 sums checked
** using staged installation
** R
** data
*** moving datasets to lazyload DB
** byte-compile and prepare package for lazy loading
Error in loadNamespace(j <- i[[1L]], c(lib.loc, .libPaths()), versionCheck = vI[[j]]) :
namespace ‘Matrix’ 1.5-4.1 is being loaded, but >= 1.6.0 is required
Calls: <Anonymous> ... namespaceImportFrom -> asNamespace -> loadNamespace
Execution halted
ERROR: lazy loading failed for package ‘bspcov’
* removing ‘/tmp/workdir/bspcov/new/bspcov.Rcheck/bspcov’
* installing *source* package ‘bspcov’ ...
** package ‘bspcov’ successfully unpacked and MD5 sums checked
** using staged installation
** R
** data
*** moving datasets to lazyload DB
** byte-compile and prepare package for lazy loading
Error in loadNamespace(j <- i[[1L]], c(lib.loc, .libPaths()), versionCheck = vI[[j]]) :
namespace ‘Matrix’ 1.5-4.1 is being loaded, but >= 1.6.0 is required
Calls: <Anonymous> ... namespaceImportFrom -> asNamespace -> loadNamespace
Execution halted
ERROR: lazy loading failed for package ‘bspcov’
* removing ‘/tmp/workdir/bspcov/old/bspcov.Rcheck/bspcov’
- Version: 0.3.2
- GitHub: https://github.com/tidymodels/censored
- Source code: https://github.com/cran/censored
- Date/Publication: 2024-06-11 18:10:02 UTC
- Number of recursive dependencies: 163
Run revdepcheck::cloud_details(, "censored") for more info
* using log directory ‘/tmp/workdir/censored/new/censored.Rcheck’
* using R version 4.3.1 (2023-06-16)
* using platform: x86_64-pc-linux-gnu (64-bit)
* R was compiled by
gcc (Ubuntu 13.2.0-23ubuntu4) 13.2.0
GNU Fortran (Ubuntu 13.2.0-23ubuntu4) 13.2.0
* running under: Ubuntu 24.04.1 LTS
* using session charset: UTF-8
* using option ‘--no-manual’
* checking for file ‘censored/DESCRIPTION’ ... OK
...
* this is package ‘censored’ version ‘0.3.2’
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... ERROR
Package required and available but unsuitable version: ‘survival’
See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
manual.
* DONE
Status: 1 ERROR
* using log directory ‘/tmp/workdir/censored/old/censored.Rcheck’
* using R version 4.3.1 (2023-06-16)
* using platform: x86_64-pc-linux-gnu (64-bit)
* R was compiled by
gcc (Ubuntu 13.2.0-23ubuntu4) 13.2.0
GNU Fortran (Ubuntu 13.2.0-23ubuntu4) 13.2.0
* running under: Ubuntu 24.04.1 LTS
* using session charset: UTF-8
* using option ‘--no-manual’
* checking for file ‘censored/DESCRIPTION’ ... OK
...
* this is package ‘censored’ version ‘0.3.2’
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... ERROR
Package required and available but unsuitable version: ‘survival’
See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
manual.
* DONE
Status: 1 ERROR
- Version: 0.6.3
- GitHub: https://github.com/ibecav/CGPfunctions
- Source code: https://github.com/cran/CGPfunctions
- Date/Publication: 2020-11-12 14:50:09 UTC
- Number of recursive dependencies: 155
Run revdepcheck::cloud_details(, "CGPfunctions") for more info
- checking whether package ‘CGPfunctions’ can be installed ... ERROR
Installation failed. See ‘/tmp/workdir/CGPfunctions/new/CGPfunctions.Rcheck/00install.out’ for details.
* installing *source* package ‘CGPfunctions’ ...
** package ‘CGPfunctions’ successfully unpacked and MD5 sums checked
** using staged installation
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
Error in loadNamespace(j <- i[[1L]], c(lib.loc, .libPaths()), versionCheck = vI[[j]]) :
namespace ‘Matrix’ 1.5-4.1 is already loaded, but >= 1.6.0 is required
Calls: <Anonymous> ... namespaceImportFrom -> asNamespace -> loadNamespace
Execution halted
ERROR: lazy loading failed for package ‘CGPfunctions’
* removing ‘/tmp/workdir/CGPfunctions/new/CGPfunctions.Rcheck/CGPfunctions’
* installing *source* package ‘CGPfunctions’ ...
** package ‘CGPfunctions’ successfully unpacked and MD5 sums checked
** using staged installation
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
Error in loadNamespace(j <- i[[1L]], c(lib.loc, .libPaths()), versionCheck = vI[[j]]) :
namespace ‘Matrix’ 1.5-4.1 is already loaded, but >= 1.6.0 is required
Calls: <Anonymous> ... namespaceImportFrom -> asNamespace -> loadNamespace
Execution halted
ERROR: lazy loading failed for package ‘CGPfunctions’
* removing ‘/tmp/workdir/CGPfunctions/old/CGPfunctions.Rcheck/CGPfunctions’
- Version: 0.1.2
- GitHub: NA
- Source code: https://github.com/cran/CSCNet
- Date/Publication: 2022-11-08 18:50:02 UTC
- Number of recursive dependencies: 171
Run revdepcheck::cloud_details(, "CSCNet") for more info
* using log directory ‘/tmp/workdir/CSCNet/new/CSCNet.Rcheck’
* using R version 4.3.1 (2023-06-16)
* using platform: x86_64-pc-linux-gnu (64-bit)
* R was compiled by
gcc (Ubuntu 13.2.0-23ubuntu4) 13.2.0
GNU Fortran (Ubuntu 13.2.0-23ubuntu4) 13.2.0
* running under: Ubuntu 24.04.1 LTS
* using session charset: UTF-8
* using option ‘--no-manual’
* checking for file ‘CSCNet/DESCRIPTION’ ... OK
...
* this is package ‘CSCNet’ version ‘0.1.2’
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... ERROR
Package required but not available: ‘riskRegression’
See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
manual.
* DONE
Status: 1 ERROR
* using log directory ‘/tmp/workdir/CSCNet/old/CSCNet.Rcheck’
* using R version 4.3.1 (2023-06-16)
* using platform: x86_64-pc-linux-gnu (64-bit)
* R was compiled by
gcc (Ubuntu 13.2.0-23ubuntu4) 13.2.0
GNU Fortran (Ubuntu 13.2.0-23ubuntu4) 13.2.0
* running under: Ubuntu 24.04.1 LTS
* using session charset: UTF-8
* using option ‘--no-manual’
* checking for file ‘CSCNet/DESCRIPTION’ ... OK
...
* this is package ‘CSCNet’ version ‘0.1.2’
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... ERROR
Package required but not available: ‘riskRegression’
See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
manual.
* DONE
Status: 1 ERROR
- Version: 0.98
- GitHub: NA
- Source code: https://github.com/cran/dartR.base
- Date/Publication: 2024-09-19 13:20:02 UTC
- Number of recursive dependencies: 288
Run revdepcheck::cloud_details(, "dartR.base") for more info
* using log directory ‘/tmp/workdir/dartR.base/new/dartR.base.Rcheck’
* using R version 4.3.1 (2023-06-16)
* using platform: x86_64-pc-linux-gnu (64-bit)
* R was compiled by
gcc (Ubuntu 13.2.0-23ubuntu4) 13.2.0
GNU Fortran (Ubuntu 13.2.0-23ubuntu4) 13.2.0
* running under: Ubuntu 24.04.1 LTS
* using session charset: UTF-8
* using option ‘--no-manual’
* checking for file ‘dartR.base/DESCRIPTION’ ... OK
...
* this is package ‘dartR.base’ version ‘0.98’
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... ERROR
Package required but not available: ‘SNPassoc’
See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
manual.
* DONE
Status: 1 ERROR
* using log directory ‘/tmp/workdir/dartR.base/old/dartR.base.Rcheck’
* using R version 4.3.1 (2023-06-16)
* using platform: x86_64-pc-linux-gnu (64-bit)
* R was compiled by
gcc (Ubuntu 13.2.0-23ubuntu4) 13.2.0
GNU Fortran (Ubuntu 13.2.0-23ubuntu4) 13.2.0
* running under: Ubuntu 24.04.1 LTS
* using session charset: UTF-8
* using option ‘--no-manual’
* checking for file ‘dartR.base/DESCRIPTION’ ... OK
...
* this is package ‘dartR.base’ version ‘0.98’
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... ERROR
Package required but not available: ‘SNPassoc’
See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
manual.
* DONE
Status: 1 ERROR
- Version: 1.0.0
- GitHub: NA
- Source code: https://github.com/cran/dartR.popgen
- Date/Publication: 2024-06-27 23:20:04 UTC
- Number of recursive dependencies: 175
Run revdepcheck::cloud_details(, "dartR.popgen") for more info
* using log directory ‘/tmp/workdir/dartR.popgen/new/dartR.popgen.Rcheck’
* using R version 4.3.1 (2023-06-16)
* using platform: x86_64-pc-linux-gnu (64-bit)
* R was compiled by
gcc (Ubuntu 13.2.0-23ubuntu4) 13.2.0
GNU Fortran (Ubuntu 13.2.0-23ubuntu4) 13.2.0
* running under: Ubuntu 24.04.1 LTS
* using session charset: UTF-8
* using option ‘--no-manual’
* checking for file ‘dartR.popgen/DESCRIPTION’ ... OK
...
* this is package ‘dartR.popgen’ version ‘1.0.0’
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... ERROR
Package required but not available: ‘dartR.base’
See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
manual.
* DONE
Status: 1 ERROR
* using log directory ‘/tmp/workdir/dartR.popgen/old/dartR.popgen.Rcheck’
* using R version 4.3.1 (2023-06-16)
* using platform: x86_64-pc-linux-gnu (64-bit)
* R was compiled by
gcc (Ubuntu 13.2.0-23ubuntu4) 13.2.0
GNU Fortran (Ubuntu 13.2.0-23ubuntu4) 13.2.0
* running under: Ubuntu 24.04.1 LTS
* using session charset: UTF-8
* using option ‘--no-manual’
* checking for file ‘dartR.popgen/DESCRIPTION’ ... OK
...
* this is package ‘dartR.popgen’ version ‘1.0.0’
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... ERROR
Package required but not available: ‘dartR.base’
See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
manual.
* DONE
Status: 1 ERROR
- Version: 1.0-0
- GitHub: https://github.com/neural-structured-additive-learning/deeptrafo
- Source code: https://github.com/cran/deeptrafo
- Date/Publication: 2024-12-03 18:40:02 UTC
- Number of recursive dependencies: 109
Run revdepcheck::cloud_details(, "deeptrafo") for more info
* using log directory ‘/tmp/workdir/deeptrafo/new/deeptrafo.Rcheck’
* using R version 4.3.1 (2023-06-16)
* using platform: x86_64-pc-linux-gnu (64-bit)
* R was compiled by
gcc (Ubuntu 13.2.0-23ubuntu4) 13.2.0
GNU Fortran (Ubuntu 13.2.0-23ubuntu4) 13.2.0
* running under: Ubuntu 24.04.1 LTS
* using session charset: UTF-8
* using option ‘--no-manual’
* checking for file ‘deeptrafo/DESCRIPTION’ ... OK
...
* checking package namespace information ... OK
* checking package dependencies ... ERROR
Package required but not available: ‘mlt’
Packages suggested but not available for checking: 'tram', 'cotram'
See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
manual.
* DONE
Status: 1 ERROR
* using log directory ‘/tmp/workdir/deeptrafo/old/deeptrafo.Rcheck’
* using R version 4.3.1 (2023-06-16)
* using platform: x86_64-pc-linux-gnu (64-bit)
* R was compiled by
gcc (Ubuntu 13.2.0-23ubuntu4) 13.2.0
GNU Fortran (Ubuntu 13.2.0-23ubuntu4) 13.2.0
* running under: Ubuntu 24.04.1 LTS
* using session charset: UTF-8
* using option ‘--no-manual’
* checking for file ‘deeptrafo/DESCRIPTION’ ... OK
...
* checking package namespace information ... OK
* checking package dependencies ... ERROR
Package required but not available: ‘mlt’
Packages suggested but not available for checking: 'tram', 'cotram'
See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
manual.
* DONE
Status: 1 ERROR
- Version: NA
- GitHub: NA
- Source code: https://github.com/cran/dibble
- Number of recursive dependencies: 51
Run revdepcheck::cloud_details(, "dibble") for more info
- Version: 3.4
- GitHub: https://github.com/feiyoung/DR.SC
- Source code: https://github.com/cran/DR.SC
- Date/Publication: 2024-03-19 08:40:02 UTC
- Number of recursive dependencies: 151
Run revdepcheck::cloud_details(, "DR.SC") for more info
- checking whether package ‘DR.SC’ can be installed ... ERROR
Installation failed. See ‘/tmp/workdir/DR.SC/new/DR.SC.Rcheck/00install.out’ for details.
* installing *source* package ‘DR.SC’ ...
** package ‘DR.SC’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C++ compiler: ‘g++ (Ubuntu 13.2.0-23ubuntu4) 13.2.0’
using C++17
g++ -std=gnu++17 -I"/opt/R/4.3.1/lib/R/include" -DNDEBUG -I'/usr/local/lib/R/site-library/Rcpp/include' -I'/usr/local/lib/R/site-library/RcppArmadillo/include' -I/usr/local/include -DARMA_64BIT_WORD -fpic -g -O2 -c RcppExports.cpp -o RcppExports.o
g++ -std=gnu++17 -I"/opt/R/4.3.1/lib/R/include" -DNDEBUG -I'/usr/local/lib/R/site-library/Rcpp/include' -I'/usr/local/lib/R/site-library/RcppArmadillo/include' -I/usr/local/include -DARMA_64BIT_WORD -fpic -g -O2 -c getNB_fast.cpp -o getNB_fast.o
g++ -std=gnu++17 -I"/opt/R/4.3.1/lib/R/include" -DNDEBUG -I'/usr/local/lib/R/site-library/Rcpp/include' -I'/usr/local/lib/R/site-library/RcppArmadillo/include' -I/usr/local/include -DARMA_64BIT_WORD -fpic -g -O2 -c mt_paral_job.cpp -o mt_paral_job.o
g++ -std=gnu++17 -I"/opt/R/4.3.1/lib/R/include" -DNDEBUG -I'/usr/local/lib/R/site-library/Rcpp/include' -I'/usr/local/lib/R/site-library/RcppArmadillo/include' -I/usr/local/include -DARMA_64BIT_WORD -fpic -g -O2 -c mt_paral_job2.cpp -o mt_paral_job2.o
...
** R
** data
** inst
** byte-compile and prepare package for lazy loading
Error in loadNamespace(j <- i[[1L]], c(lib.loc, .libPaths()), versionCheck = vI[[j]]) :
namespace ‘Matrix’ 1.5-4.1 is already loaded, but >= 1.6.4 is required
Calls: <Anonymous> ... namespaceImportFrom -> asNamespace -> loadNamespace
Execution halted
ERROR: lazy loading failed for package ‘DR.SC’
* removing ‘/tmp/workdir/DR.SC/new/DR.SC.Rcheck/DR.SC’
* installing *source* package ‘DR.SC’ ...
** package ‘DR.SC’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C++ compiler: ‘g++ (Ubuntu 13.2.0-23ubuntu4) 13.2.0’
using C++17
g++ -std=gnu++17 -I"/opt/R/4.3.1/lib/R/include" -DNDEBUG -I'/usr/local/lib/R/site-library/Rcpp/include' -I'/usr/local/lib/R/site-library/RcppArmadillo/include' -I/usr/local/include -DARMA_64BIT_WORD -fpic -g -O2 -c RcppExports.cpp -o RcppExports.o
g++ -std=gnu++17 -I"/opt/R/4.3.1/lib/R/include" -DNDEBUG -I'/usr/local/lib/R/site-library/Rcpp/include' -I'/usr/local/lib/R/site-library/RcppArmadillo/include' -I/usr/local/include -DARMA_64BIT_WORD -fpic -g -O2 -c getNB_fast.cpp -o getNB_fast.o
g++ -std=gnu++17 -I"/opt/R/4.3.1/lib/R/include" -DNDEBUG -I'/usr/local/lib/R/site-library/Rcpp/include' -I'/usr/local/lib/R/site-library/RcppArmadillo/include' -I/usr/local/include -DARMA_64BIT_WORD -fpic -g -O2 -c mt_paral_job.cpp -o mt_paral_job.o
g++ -std=gnu++17 -I"/opt/R/4.3.1/lib/R/include" -DNDEBUG -I'/usr/local/lib/R/site-library/Rcpp/include' -I'/usr/local/lib/R/site-library/RcppArmadillo/include' -I/usr/local/include -DARMA_64BIT_WORD -fpic -g -O2 -c mt_paral_job2.cpp -o mt_paral_job2.o
...
** R
** data
** inst
** byte-compile and prepare package for lazy loading
Error in loadNamespace(j <- i[[1L]], c(lib.loc, .libPaths()), versionCheck = vI[[j]]) :
namespace ‘Matrix’ 1.5-4.1 is already loaded, but >= 1.6.4 is required
Calls: <Anonymous> ... namespaceImportFrom -> asNamespace -> loadNamespace
Execution halted
ERROR: lazy loading failed for package ‘DR.SC’
* removing ‘/tmp/workdir/DR.SC/old/DR.SC.Rcheck/DR.SC’
- Version: 1.0.0
- GitHub: https://github.com/viralemergence/epizootic
- Source code: https://github.com/cran/epizootic
- Date/Publication: 2024-10-02 13:10:05 UTC
- Number of recursive dependencies: 93
Run revdepcheck::cloud_details(, "epizootic") for more info
- checking whether package ‘epizootic’ can be installed ... ERROR
Installation failed. See ‘/tmp/workdir/epizootic/new/epizootic.Rcheck/00install.out’ for details.
* installing *source* package ‘epizootic’ ...
** package ‘epizootic’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C++ compiler: ‘g++ (Ubuntu 13.2.0-23ubuntu4) 13.2.0’
g++ -std=gnu++17 -I"/opt/R/4.3.1/lib/R/include" -DNDEBUG -I'/usr/local/lib/R/site-library/Rcpp/include' -I'/usr/local/lib/R/site-library/RcppArmadillo/include' -I/usr/local/include -fopenmp -fpic -g -O2 -c RcppExports.cpp -o RcppExports.o
g++ -std=gnu++17 -I"/opt/R/4.3.1/lib/R/include" -DNDEBUG -I'/usr/local/lib/R/site-library/Rcpp/include' -I'/usr/local/lib/R/site-library/RcppArmadillo/include' -I/usr/local/include -fopenmp -fpic -g -O2 -c aspatial_siri.cpp -o aspatial_siri.o
g++ -std=gnu++17 -shared -L/opt/R/4.3.1/lib/R/lib -L/usr/local/lib -o epizootic.so RcppExports.o aspatial_siri.o -fopenmp -llapack -lblas -lgfortran -lm -lquadmath -L/opt/R/4.3.1/lib/R/lib -lR
installing to /tmp/workdir/epizootic/new/epizootic.Rcheck/00LOCK-epizootic/00new/epizootic/libs
** R
...
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
Error in loadNamespace(j <- i[[1L]], c(lib.loc, .libPaths()), versionCheck = vI[[j]]) :
namespace ‘Matrix’ 1.5-4.1 is already loaded, but >= 1.6.0 is required
Calls: <Anonymous> ... namespaceImportFrom -> asNamespace -> loadNamespace
Execution halted
ERROR: lazy loading failed for package ‘epizootic’
* removing ‘/tmp/workdir/epizootic/new/epizootic.Rcheck/epizootic’
* installing *source* package ‘epizootic’ ...
** package ‘epizootic’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C++ compiler: ‘g++ (Ubuntu 13.2.0-23ubuntu4) 13.2.0’
g++ -std=gnu++17 -I"/opt/R/4.3.1/lib/R/include" -DNDEBUG -I'/usr/local/lib/R/site-library/Rcpp/include' -I'/usr/local/lib/R/site-library/RcppArmadillo/include' -I/usr/local/include -fopenmp -fpic -g -O2 -c RcppExports.cpp -o RcppExports.o
g++ -std=gnu++17 -I"/opt/R/4.3.1/lib/R/include" -DNDEBUG -I'/usr/local/lib/R/site-library/Rcpp/include' -I'/usr/local/lib/R/site-library/RcppArmadillo/include' -I/usr/local/include -fopenmp -fpic -g -O2 -c aspatial_siri.cpp -o aspatial_siri.o
g++ -std=gnu++17 -shared -L/opt/R/4.3.1/lib/R/lib -L/usr/local/lib -o epizootic.so RcppExports.o aspatial_siri.o -fopenmp -llapack -lblas -lgfortran -lm -lquadmath -L/opt/R/4.3.1/lib/R/lib -lR
installing to /tmp/workdir/epizootic/old/epizootic.Rcheck/00LOCK-epizootic/00new/epizootic/libs
** R
...
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
Error in loadNamespace(j <- i[[1L]], c(lib.loc, .libPaths()), versionCheck = vI[[j]]) :
namespace ‘Matrix’ 1.5-4.1 is already loaded, but >= 1.6.0 is required
Calls: <Anonymous> ... namespaceImportFrom -> asNamespace -> loadNamespace
Execution halted
ERROR: lazy loading failed for package ‘epizootic’
* removing ‘/tmp/workdir/epizootic/old/epizootic.Rcheck/epizootic’
- Version: NA
- GitHub: NA
- Source code: https://github.com/cran/GeoTox
- Number of recursive dependencies: 143
Run revdepcheck::cloud_details(, "GeoTox") for more info
- Version: 0.0.5
- GitHub: https://github.com/junjunlab/GseaVis
- Source code: https://github.com/cran/GseaVis
- Date/Publication: 2022-12-20 19:40:07 UTC
- Number of recursive dependencies: 104
Run revdepcheck::cloud_details(, "GseaVis") for more info
* using log directory ‘/tmp/workdir/GseaVis/new/GseaVis.Rcheck’
* using R version 4.3.1 (2023-06-16)
* using platform: x86_64-pc-linux-gnu (64-bit)
* R was compiled by
gcc (Ubuntu 13.2.0-23ubuntu4) 13.2.0
GNU Fortran (Ubuntu 13.2.0-23ubuntu4) 13.2.0
* running under: Ubuntu 24.04.1 LTS
* using session charset: UTF-8
* using option ‘--no-manual’
* checking for file ‘GseaVis/DESCRIPTION’ ... OK
...
* this is package ‘GseaVis’ version ‘0.0.5’
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... ERROR
Package required but not available: ‘DOSE’
See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
manual.
* DONE
Status: 1 ERROR
* using log directory ‘/tmp/workdir/GseaVis/old/GseaVis.Rcheck’
* using R version 4.3.1 (2023-06-16)
* using platform: x86_64-pc-linux-gnu (64-bit)
* R was compiled by
gcc (Ubuntu 13.2.0-23ubuntu4) 13.2.0
GNU Fortran (Ubuntu 13.2.0-23ubuntu4) 13.2.0
* running under: Ubuntu 24.04.1 LTS
* using session charset: UTF-8
* using option ‘--no-manual’
* checking for file ‘GseaVis/DESCRIPTION’ ... OK
...
* this is package ‘GseaVis’ version ‘0.0.5’
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... ERROR
Package required but not available: ‘DOSE’
See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
manual.
* DONE
Status: 1 ERROR
- Version: 0.1.3
- GitHub: https://github.com/bfifield/hettx
- Source code: https://github.com/cran/hettx
- Date/Publication: 2023-08-19 22:22:34 UTC
- Number of recursive dependencies: 84
Run revdepcheck::cloud_details(, "hettx") for more info
- checking whether package ‘hettx’ can be installed ... ERROR
Installation failed. See ‘/tmp/workdir/hettx/new/hettx.Rcheck/00install.out’ for details.
* installing *source* package ‘hettx’ ...
** package ‘hettx’ successfully unpacked and MD5 sums checked
** using staged installation
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
Error in loadNamespace(j <- i[[1L]], c(lib.loc, .libPaths()), versionCheck = vI[[j]]) :
namespace ‘Matrix’ 1.5-4.1 is already loaded, but >= 1.6.0 is required
Calls: <Anonymous> ... namespaceImportFrom -> asNamespace -> loadNamespace
Execution halted
ERROR: lazy loading failed for package ‘hettx’
* removing ‘/tmp/workdir/hettx/new/hettx.Rcheck/hettx’
* installing *source* package ‘hettx’ ...
** package ‘hettx’ successfully unpacked and MD5 sums checked
** using staged installation
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
Error in loadNamespace(j <- i[[1L]], c(lib.loc, .libPaths()), versionCheck = vI[[j]]) :
namespace ‘Matrix’ 1.5-4.1 is already loaded, but >= 1.6.0 is required
Calls: <Anonymous> ... namespaceImportFrom -> asNamespace -> loadNamespace
Execution halted
ERROR: lazy loading failed for package ‘hettx’
* removing ‘/tmp/workdir/hettx/old/hettx.Rcheck/hettx’
- Version: 1.0.3
- GitHub: https://github.com/YuanlongHu/immcp
- Source code: https://github.com/cran/immcp
- Date/Publication: 2022-05-12 05:50:02 UTC
- Number of recursive dependencies: 187
Run revdepcheck::cloud_details(, "immcp") for more info
* using log directory ‘/tmp/workdir/immcp/new/immcp.Rcheck’
* using R version 4.3.1 (2023-06-16)
* using platform: x86_64-pc-linux-gnu (64-bit)
* R was compiled by
gcc (Ubuntu 13.2.0-23ubuntu4) 13.2.0
GNU Fortran (Ubuntu 13.2.0-23ubuntu4) 13.2.0
* running under: Ubuntu 24.04.1 LTS
* using session charset: UTF-8
* using option ‘--no-manual’
* checking for file ‘immcp/DESCRIPTION’ ... OK
...
* this is package ‘immcp’ version ‘1.0.3’
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... ERROR
Packages required but not available: 'clusterProfiler', 'DOSE'
See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
manual.
* DONE
Status: 1 ERROR
* using log directory ‘/tmp/workdir/immcp/old/immcp.Rcheck’
* using R version 4.3.1 (2023-06-16)
* using platform: x86_64-pc-linux-gnu (64-bit)
* R was compiled by
gcc (Ubuntu 13.2.0-23ubuntu4) 13.2.0
GNU Fortran (Ubuntu 13.2.0-23ubuntu4) 13.2.0
* running under: Ubuntu 24.04.1 LTS
* using session charset: UTF-8
* using option ‘--no-manual’
* checking for file ‘immcp/DESCRIPTION’ ... OK
...
* this is package ‘immcp’ version ‘1.0.3’
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... ERROR
Packages required but not available: 'clusterProfiler', 'DOSE'
See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
manual.
* DONE
Status: 1 ERROR
- Version: 2.0.0
- GitHub: NA
- Source code: https://github.com/cran/invivoPKfit
- Date/Publication: 2025-01-09 14:30:02 UTC
- Number of recursive dependencies: 172
Run revdepcheck::cloud_details(, "invivoPKfit") for more info
- checking whether package ‘invivoPKfit’ can be installed ... ERROR
Installation failed. See ‘/tmp/workdir/invivoPKfit/new/invivoPKfit.Rcheck/00install.out’ for details.
* installing *source* package ‘invivoPKfit’ ...
** package ‘invivoPKfit’ successfully unpacked and MD5 sums checked
** using staged installation
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
Error: object ‘expand1’ is not exported by 'namespace:Matrix'
Execution halted
ERROR: lazy loading failed for package ‘invivoPKfit’
* removing ‘/tmp/workdir/invivoPKfit/new/invivoPKfit.Rcheck/invivoPKfit’
* installing *source* package ‘invivoPKfit’ ...
** package ‘invivoPKfit’ successfully unpacked and MD5 sums checked
** using staged installation
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
Error: object ‘expand1’ is not exported by 'namespace:Matrix'
Execution halted
ERROR: lazy loading failed for package ‘invivoPKfit’
* removing ‘/tmp/workdir/invivoPKfit/old/invivoPKfit.Rcheck/invivoPKfit’
- Version: 1.6.1
- GitHub: https://github.com/jinseob2kim/jsmodule
- Source code: https://github.com/cran/jsmodule
- Date/Publication: 2025-01-08 13:10:02 UTC
- Number of recursive dependencies: 241
Run revdepcheck::cloud_details(, "jsmodule") for more info
* using log directory ‘/tmp/workdir/jsmodule/new/jsmodule.Rcheck’
* using R version 4.3.1 (2023-06-16)
* using platform: x86_64-pc-linux-gnu (64-bit)
* R was compiled by
gcc (Ubuntu 13.2.0-23ubuntu4) 13.2.0
GNU Fortran (Ubuntu 13.2.0-23ubuntu4) 13.2.0
* running under: Ubuntu 24.04.1 LTS
* using session charset: UTF-8
* using option ‘--no-manual’
* checking for file ‘jsmodule/DESCRIPTION’ ... OK
...
* checking tests ... OK
Running ‘testthat.R’
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes in ‘inst/doc’ ... OK
* checking running R code from vignettes ... OK
‘jsmodule.Rmd’ using ‘UTF-8’... OK
‘jsmodule_subgroup_cmprsk.Rmd’ using ‘UTF-8’... OK
* checking re-building of vignette outputs ... OK
* DONE
Status: OK
* using log directory ‘/tmp/workdir/jsmodule/old/jsmodule.Rcheck’
* using R version 4.3.1 (2023-06-16)
* using platform: x86_64-pc-linux-gnu (64-bit)
* R was compiled by
gcc (Ubuntu 13.2.0-23ubuntu4) 13.2.0
GNU Fortran (Ubuntu 13.2.0-23ubuntu4) 13.2.0
* running under: Ubuntu 24.04.1 LTS
* using session charset: UTF-8
* using option ‘--no-manual’
* checking for file ‘jsmodule/DESCRIPTION’ ... OK
...
* checking tests ... OK
Running ‘testthat.R’
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes in ‘inst/doc’ ... OK
* checking running R code from vignettes ... OK
‘jsmodule.Rmd’ using ‘UTF-8’... OK
‘jsmodule_subgroup_cmprsk.Rmd’ using ‘UTF-8’... OK
* checking re-building of vignette outputs ... OK
* DONE
Status: OK
- Version: 3.1.6
- GitHub: NA
- Source code: https://github.com/cran/lnmixsurv
- Date/Publication: 2024-09-03 15:20:08 UTC
- Number of recursive dependencies: 195
Run revdepcheck::cloud_details(, "lnmixsurv") for more info
* using log directory ‘/tmp/workdir/lnmixsurv/new/lnmixsurv.Rcheck’
* using R version 4.3.1 (2023-06-16)
* using platform: x86_64-pc-linux-gnu (64-bit)
* R was compiled by
gcc (Ubuntu 13.2.0-23ubuntu4) 13.2.0
GNU Fortran (Ubuntu 13.2.0-23ubuntu4) 13.2.0
* running under: Ubuntu 24.04.1 LTS
* using session charset: UTF-8
* using option ‘--no-manual’
* checking for file ‘lnmixsurv/DESCRIPTION’ ... OK
...
* checking package vignettes in ‘inst/doc’ ... OK
* checking running R code from vignettes ... OK
‘compare.Rmd’ using ‘UTF-8’... OK
‘expectation_maximization.Rmd’ using ‘UTF-8’... OK
‘intercept_only.Rmd’ using ‘UTF-8’... OK
‘lnmixsurv.Rmd’ using ‘UTF-8’... OK
‘parallel_computation.Rmd’ using ‘UTF-8’... OK
* checking re-building of vignette outputs ... OK
* DONE
Status: 4 NOTEs
* using log directory ‘/tmp/workdir/lnmixsurv/old/lnmixsurv.Rcheck’
* using R version 4.3.1 (2023-06-16)
* using platform: x86_64-pc-linux-gnu (64-bit)
* R was compiled by
gcc (Ubuntu 13.2.0-23ubuntu4) 13.2.0
GNU Fortran (Ubuntu 13.2.0-23ubuntu4) 13.2.0
* running under: Ubuntu 24.04.1 LTS
* using session charset: UTF-8
* using option ‘--no-manual’
* checking for file ‘lnmixsurv/DESCRIPTION’ ... OK
...
* checking package vignettes in ‘inst/doc’ ... OK
* checking running R code from vignettes ... OK
‘compare.Rmd’ using ‘UTF-8’... OK
‘expectation_maximization.Rmd’ using ‘UTF-8’... OK
‘intercept_only.Rmd’ using ‘UTF-8’... OK
‘lnmixsurv.Rmd’ using ‘UTF-8’... OK
‘parallel_computation.Rmd’ using ‘UTF-8’... OK
* checking re-building of vignette outputs ... OK
* DONE
Status: 4 NOTEs
- Version: 1.3.3
- GitHub: NA
- Source code: https://github.com/cran/lsirm12pl
- Date/Publication: 2024-08-28 23:00:02 UTC
- Number of recursive dependencies: 123
Run revdepcheck::cloud_details(, "lsirm12pl") for more info
- checking whether package ‘lsirm12pl’ can be installed ... ERROR
Installation failed. See ‘/tmp/workdir/lsirm12pl/new/lsirm12pl.Rcheck/00install.out’ for details.
* installing *source* package ‘lsirm12pl’ ...
** package ‘lsirm12pl’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C++ compiler: ‘g++ (Ubuntu 13.2.0-23ubuntu4) 13.2.0’
g++ -std=gnu++17 -I"/opt/R/4.3.1/lib/R/include" -DNDEBUG -I'/usr/local/lib/R/site-library/Rcpp/include' -I'/usr/local/lib/R/site-library/RcppArmadillo/include' -I/usr/local/include -fopenmp -fpic -g -O2 -c RcppExports.cpp -o RcppExports.o
g++ -std=gnu++17 -I"/opt/R/4.3.1/lib/R/include" -DNDEBUG -I'/usr/local/lib/R/site-library/Rcpp/include' -I'/usr/local/lib/R/site-library/RcppArmadillo/include' -I/usr/local/include -fopenmp -fpic -g -O2 -c lsirm1pl.cpp -o lsirm1pl.o
g++ -std=gnu++17 -I"/opt/R/4.3.1/lib/R/include" -DNDEBUG -I'/usr/local/lib/R/site-library/Rcpp/include' -I'/usr/local/lib/R/site-library/RcppArmadillo/include' -I/usr/local/include -fopenmp -fpic -g -O2 -c lsirm2pl.cpp -o lsirm2pl.o
g++ -std=gnu++17 -I"/opt/R/4.3.1/lib/R/include" -DNDEBUG -I'/usr/local/lib/R/site-library/Rcpp/include' -I'/usr/local/lib/R/site-library/RcppArmadillo/include' -I/usr/local/include -fopenmp -fpic -g -O2 -c lsm.cpp -o lsm.o
g++ -std=gnu++17 -I"/opt/R/4.3.1/lib/R/include" -DNDEBUG -I'/usr/local/lib/R/site-library/Rcpp/include' -I'/usr/local/lib/R/site-library/RcppArmadillo/include' -I/usr/local/include -fopenmp -fpic -g -O2 -c utility_cpp.cpp -o utility_cpp.o
...
** R
** data
*** moving datasets to lazyload DB
** byte-compile and prepare package for lazy loading
Error in loadNamespace(j <- i[[1L]], c(lib.loc, .libPaths()), versionCheck = vI[[j]]) :
namespace ‘Matrix’ 1.5-4.1 is already loaded, but >= 1.6.0 is required
Calls: <Anonymous> ... namespaceImportFrom -> asNamespace -> loadNamespace
Execution halted
ERROR: lazy loading failed for package ‘lsirm12pl’
* removing ‘/tmp/workdir/lsirm12pl/new/lsirm12pl.Rcheck/lsirm12pl’
* installing *source* package ‘lsirm12pl’ ...
** package ‘lsirm12pl’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C++ compiler: ‘g++ (Ubuntu 13.2.0-23ubuntu4) 13.2.0’
g++ -std=gnu++17 -I"/opt/R/4.3.1/lib/R/include" -DNDEBUG -I'/usr/local/lib/R/site-library/Rcpp/include' -I'/usr/local/lib/R/site-library/RcppArmadillo/include' -I/usr/local/include -fopenmp -fpic -g -O2 -c RcppExports.cpp -o RcppExports.o
g++ -std=gnu++17 -I"/opt/R/4.3.1/lib/R/include" -DNDEBUG -I'/usr/local/lib/R/site-library/Rcpp/include' -I'/usr/local/lib/R/site-library/RcppArmadillo/include' -I/usr/local/include -fopenmp -fpic -g -O2 -c lsirm1pl.cpp -o lsirm1pl.o
g++ -std=gnu++17 -I"/opt/R/4.3.1/lib/R/include" -DNDEBUG -I'/usr/local/lib/R/site-library/Rcpp/include' -I'/usr/local/lib/R/site-library/RcppArmadillo/include' -I/usr/local/include -fopenmp -fpic -g -O2 -c lsirm2pl.cpp -o lsirm2pl.o
g++ -std=gnu++17 -I"/opt/R/4.3.1/lib/R/include" -DNDEBUG -I'/usr/local/lib/R/site-library/Rcpp/include' -I'/usr/local/lib/R/site-library/RcppArmadillo/include' -I/usr/local/include -fopenmp -fpic -g -O2 -c lsm.cpp -o lsm.o
g++ -std=gnu++17 -I"/opt/R/4.3.1/lib/R/include" -DNDEBUG -I'/usr/local/lib/R/site-library/Rcpp/include' -I'/usr/local/lib/R/site-library/RcppArmadillo/include' -I/usr/local/include -fopenmp -fpic -g -O2 -c utility_cpp.cpp -o utility_cpp.o
...
** R
** data
*** moving datasets to lazyload DB
** byte-compile and prepare package for lazy loading
Error in loadNamespace(j <- i[[1L]], c(lib.loc, .libPaths()), versionCheck = vI[[j]]) :
namespace ‘Matrix’ 1.5-4.1 is already loaded, but >= 1.6.0 is required
Calls: <Anonymous> ... namespaceImportFrom -> asNamespace -> loadNamespace
Execution halted
ERROR: lazy loading failed for package ‘lsirm12pl’
* removing ‘/tmp/workdir/lsirm12pl/old/lsirm12pl.Rcheck/lsirm12pl’
- Version: NA
- GitHub: NA
- Source code: https://github.com/cran/MantaID
- Number of recursive dependencies: 157
Run revdepcheck::cloud_details(, "MantaID") for more info
- Version: 0.3.1
- GitHub: https://github.com/NCEAS/metajam
- Source code: https://github.com/cran/metajam
- Date/Publication: 2024-08-16 17:50:02 UTC
- Number of recursive dependencies: 90
Run revdepcheck::cloud_details(, "metajam") for more info
- checking whether package ‘metajam’ can be installed ... ERROR
Installation failed. See ‘/tmp/workdir/metajam/new/metajam.Rcheck/00install.out’ for details.
* installing *source* package ‘metajam’ ...
** package ‘metajam’ successfully unpacked and MD5 sums checked
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
Error in dyn.load(file, DLLpath = DLLpath, ...) :
unable to load shared object '/usr/local/lib/R/site-library/redland/libs/redland.so':
librdf.so.0: cannot open shared object file: No such file or directory
Calls: <Anonymous> ... namespaceImport -> loadNamespace -> library.dynam -> dyn.load
Execution halted
ERROR: lazy loading failed for package ‘metajam’
* removing ‘/tmp/workdir/metajam/new/metajam.Rcheck/metajam’
* installing *source* package ‘metajam’ ...
** package ‘metajam’ successfully unpacked and MD5 sums checked
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
Error in dyn.load(file, DLLpath = DLLpath, ...) :
unable to load shared object '/usr/local/lib/R/site-library/redland/libs/redland.so':
librdf.so.0: cannot open shared object file: No such file or directory
Calls: <Anonymous> ... namespaceImport -> loadNamespace -> library.dynam -> dyn.load
Execution halted
ERROR: lazy loading failed for package ‘metajam’
* removing ‘/tmp/workdir/metajam/old/metajam.Rcheck/metajam’
- Version: 0.4.4
- GitHub: https://github.com/phargarten2/miWQS
- Source code: https://github.com/cran/miWQS
- Date/Publication: 2021-04-02 21:50:02 UTC
- Number of recursive dependencies: 151
Run revdepcheck::cloud_details(, "miWQS") for more info
-
checking whether package ‘miWQS’ can be installed ... ERROR
Installation failed. See ‘/tmp/workdir/miWQS/new/miWQS.Rcheck/00install.out’ for details. -
checking package dependencies ... NOTE
Package suggested but not available for checking: ‘wqs’
* installing *source* package ‘miWQS’ ...
** package ‘miWQS’ successfully unpacked and MD5 sums checked
** using staged installation
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
Error in loadNamespace(j <- i[[1L]], c(lib.loc, .libPaths()), versionCheck = vI[[j]]) :
namespace ‘Matrix’ 1.5-4.1 is already loaded, but >= 1.6.0 is required
Calls: <Anonymous> ... namespaceImportFrom -> asNamespace -> loadNamespace
Execution halted
ERROR: lazy loading failed for package ‘miWQS’
* removing ‘/tmp/workdir/miWQS/new/miWQS.Rcheck/miWQS’
* installing *source* package ‘miWQS’ ...
** package ‘miWQS’ successfully unpacked and MD5 sums checked
** using staged installation
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
Error in loadNamespace(j <- i[[1L]], c(lib.loc, .libPaths()), versionCheck = vI[[j]]) :
namespace ‘Matrix’ 1.5-4.1 is already loaded, but >= 1.6.0 is required
Calls: <Anonymous> ... namespaceImportFrom -> asNamespace -> loadNamespace
Execution halted
ERROR: lazy loading failed for package ‘miWQS’
* removing ‘/tmp/workdir/miWQS/old/miWQS.Rcheck/miWQS’
- Version: 0.7.2
- GitHub: https://github.com/dmphillippo/multinma
- Source code: https://github.com/cran/multinma
- Date/Publication: 2024-09-16 12:20:02 UTC
- Number of recursive dependencies: 151
Run revdepcheck::cloud_details(, "multinma") for more info
- checking whether package ‘multinma’ can be installed ... ERROR
Installation failed. See ‘/tmp/workdir/multinma/new/multinma.Rcheck/00install.out’ for details.
* installing *source* package ‘multinma’ ...
** package ‘multinma’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C++ compiler: ‘g++ (Ubuntu 13.2.0-23ubuntu4) 13.2.0’
using C++17
g++ -std=gnu++17 -I"/opt/R/4.3.1/lib/R/include" -DNDEBUG -I"../inst/include" -I"/usr/local/lib/R/site-library/StanHeaders/include/src" -DBOOST_DISABLE_ASSERTS -DEIGEN_NO_DEBUG -DBOOST_MATH_OVERFLOW_ERROR_POLICY=errno_on_error -DUSE_STANC3 -D_HAS_AUTO_PTR_ETC=0 -I'/usr/local/lib/R/site-library/BH/include' -I'/usr/local/lib/R/site-library/Rcpp/include' -I'/usr/local/lib/R/site-library/RcppEigen/include' -I'/usr/local/lib/R/site-library/RcppParallel/include' -I'/usr/local/lib/R/site-library/rstan/include' -I'/usr/local/lib/R/site-library/StanHeaders/include' -I/usr/local/include -I'/usr/local/lib/R/site-library/RcppParallel/include' -D_REENTRANT -DSTAN_THREADS -fpic -g -O2 -c RcppExports.cpp -o RcppExports.o
In file included from /usr/local/lib/R/site-library/RcppEigen/include/Eigen/Core:205,
...
/usr/local/lib/R/site-library/StanHeaders/include/src/stan/mcmc/hmc/hamiltonians/dense_e_metric.hpp:22:0: required from ‘double stan::mcmc::dense_e_metric<Model, BaseRNG>::T(stan::mcmc::dense_e_point&) [with Model = model_survival_param_namespace::model_survival_param; BaseRNG = boost::random::additive_combine_engine<boost::random::linear_congruential_engine<unsigned int, 40014, 0, 2147483563>, boost::random::linear_congruential_engine<unsigned int, 40692, 0, 2147483399> >]’
/usr/local/lib/R/site-library/StanHeaders/include/src/stan/mcmc/hmc/hamiltonians/dense_e_metric.hpp:21:0: required from here
/usr/local/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:654:74: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
654 | return internal::first_aligned<int(unpacket_traits<DefaultPacketType>::alignment),Derived>(m);
| ^~~~~~~~~
g++: fatal error: Killed signal terminated program cc1plus
compilation terminated.
make: *** [/opt/R/4.3.1/lib/R/etc/Makeconf:198: stanExports_survival_param.o] Error 1
ERROR: compilation failed for package ‘multinma’
* removing ‘/tmp/workdir/multinma/new/multinma.Rcheck/multinma’
* installing *source* package ‘multinma’ ...
** package ‘multinma’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C++ compiler: ‘g++ (Ubuntu 13.2.0-23ubuntu4) 13.2.0’
using C++17
g++ -std=gnu++17 -I"/opt/R/4.3.1/lib/R/include" -DNDEBUG -I"../inst/include" -I"/usr/local/lib/R/site-library/StanHeaders/include/src" -DBOOST_DISABLE_ASSERTS -DEIGEN_NO_DEBUG -DBOOST_MATH_OVERFLOW_ERROR_POLICY=errno_on_error -DUSE_STANC3 -D_HAS_AUTO_PTR_ETC=0 -I'/usr/local/lib/R/site-library/BH/include' -I'/usr/local/lib/R/site-library/Rcpp/include' -I'/usr/local/lib/R/site-library/RcppEigen/include' -I'/usr/local/lib/R/site-library/RcppParallel/include' -I'/usr/local/lib/R/site-library/rstan/include' -I'/usr/local/lib/R/site-library/StanHeaders/include' -I/usr/local/include -I'/usr/local/lib/R/site-library/RcppParallel/include' -D_REENTRANT -DSTAN_THREADS -fpic -g -O2 -c RcppExports.cpp -o RcppExports.o
In file included from /usr/local/lib/R/site-library/RcppEigen/include/Eigen/Core:205,
...
/usr/local/lib/R/site-library/StanHeaders/include/src/stan/mcmc/hmc/hamiltonians/dense_e_metric.hpp:22:0: required from ‘double stan::mcmc::dense_e_metric<Model, BaseRNG>::T(stan::mcmc::dense_e_point&) [with Model = model_survival_param_namespace::model_survival_param; BaseRNG = boost::random::additive_combine_engine<boost::random::linear_congruential_engine<unsigned int, 40014, 0, 2147483563>, boost::random::linear_congruential_engine<unsigned int, 40692, 0, 2147483399> >]’
/usr/local/lib/R/site-library/StanHeaders/include/src/stan/mcmc/hmc/hamiltonians/dense_e_metric.hpp:21:0: required from here
/usr/local/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:654:74: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
654 | return internal::first_aligned<int(unpacket_traits<DefaultPacketType>::alignment),Derived>(m);
| ^~~~~~~~~
g++: fatal error: Killed signal terminated program cc1plus
compilation terminated.
make: *** [/opt/R/4.3.1/lib/R/etc/Makeconf:198: stanExports_survival_param.o] Error 1
ERROR: compilation failed for package ‘multinma’
* removing ‘/tmp/workdir/multinma/old/multinma.Rcheck/multinma’
- Version: 0.3.1
- GitHub: https://github.com/jsta/nesRdata
- Source code: https://github.com/cran/nesRdata
- Date/Publication: 2020-04-30 17:20:02 UTC
- Number of recursive dependencies: 66
Run revdepcheck::cloud_details(, "nesRdata") for more info
- checking whether package ‘nesRdata’ can be installed ... ERROR
Installation failed. See ‘/tmp/workdir/nesRdata/new/nesRdata.Rcheck/00install.out’ for details.
* installing *source* package ‘nesRdata’ ...
** package ‘nesRdata’ successfully unpacked and MD5 sums checked
** using staged installation
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
Error in dyn.load(file, DLLpath = DLLpath, ...) :
unable to load shared object '/usr/local/lib/R/site-library/redland/libs/redland.so':
librdf.so.0: cannot open shared object file: No such file or directory
Calls: <Anonymous> ... namespaceImport -> loadNamespace -> library.dynam -> dyn.load
Execution halted
ERROR: lazy loading failed for package ‘nesRdata’
* removing ‘/tmp/workdir/nesRdata/new/nesRdata.Rcheck/nesRdata’
* installing *source* package ‘nesRdata’ ...
** package ‘nesRdata’ successfully unpacked and MD5 sums checked
** using staged installation
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
Error in dyn.load(file, DLLpath = DLLpath, ...) :
unable to load shared object '/usr/local/lib/R/site-library/redland/libs/redland.so':
librdf.so.0: cannot open shared object file: No such file or directory
Calls: <Anonymous> ... namespaceImport -> loadNamespace -> library.dynam -> dyn.load
Execution halted
ERROR: lazy loading failed for package ‘nesRdata’
* removing ‘/tmp/workdir/nesRdata/old/nesRdata.Rcheck/nesRdata’
- Version: 0.1.2
- GitHub: NA
- Source code: https://github.com/cran/obliqueRSF
- Date/Publication: 2022-08-28 20:50:02 UTC
- Number of recursive dependencies: 117
Run revdepcheck::cloud_details(, "obliqueRSF") for more info
* using log directory ‘/tmp/workdir/obliqueRSF/new/obliqueRSF.Rcheck’
* using R version 4.3.1 (2023-06-16)
* using platform: x86_64-pc-linux-gnu (64-bit)
* R was compiled by
gcc (Ubuntu 13.2.0-23ubuntu4) 13.2.0
GNU Fortran (Ubuntu 13.2.0-23ubuntu4) 13.2.0
* running under: Ubuntu 24.04.1 LTS
* using session charset: UTF-8
* using option ‘--no-manual’
* checking for file ‘obliqueRSF/DESCRIPTION’ ... OK
...
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking line endings in C/C++/Fortran sources/headers ... OK
* checking compiled code ... OK
* checking examples ... OK
* DONE
Status: OK
* using log directory ‘/tmp/workdir/obliqueRSF/old/obliqueRSF.Rcheck’
* using R version 4.3.1 (2023-06-16)
* using platform: x86_64-pc-linux-gnu (64-bit)
* R was compiled by
gcc (Ubuntu 13.2.0-23ubuntu4) 13.2.0
GNU Fortran (Ubuntu 13.2.0-23ubuntu4) 13.2.0
* running under: Ubuntu 24.04.1 LTS
* using session charset: UTF-8
* using option ‘--no-manual’
* checking for file ‘obliqueRSF/DESCRIPTION’ ... OK
...
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking line endings in C/C++/Fortran sources/headers ... OK
* checking compiled code ... OK
* checking examples ... OK
* DONE
Status: OK
- Version: 0.7.4
- GitHub: https://github.com/luckinet/ontologics
- Source code: https://github.com/cran/ontologics
- Date/Publication: 2025-01-17 16:50:02 UTC
- Number of recursive dependencies: 80
Run revdepcheck::cloud_details(, "ontologics") for more info
- checking whether package ‘ontologics’ can be installed ... ERROR
Installation failed. See ‘/tmp/workdir/ontologics/new/ontologics.Rcheck/00install.out’ for details.
* installing *source* package ‘ontologics’ ...
** package ‘ontologics’ successfully unpacked and MD5 sums checked
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
Error in dyn.load(file, DLLpath = DLLpath, ...) :
unable to load shared object '/usr/local/lib/R/site-library/redland/libs/redland.so':
librdf.so.0: cannot open shared object file: No such file or directory
Calls: <Anonymous> ... asNamespace -> loadNamespace -> library.dynam -> dyn.load
Execution halted
ERROR: lazy loading failed for package ‘ontologics’
* removing ‘/tmp/workdir/ontologics/new/ontologics.Rcheck/ontologics’
* installing *source* package ‘ontologics’ ...
** package ‘ontologics’ successfully unpacked and MD5 sums checked
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
Error in dyn.load(file, DLLpath = DLLpath, ...) :
unable to load shared object '/usr/local/lib/R/site-library/redland/libs/redland.so':
librdf.so.0: cannot open shared object file: No such file or directory
Calls: <Anonymous> ... asNamespace -> loadNamespace -> library.dynam -> dyn.load
Execution halted
ERROR: lazy loading failed for package ‘ontologics’
* removing ‘/tmp/workdir/ontologics/old/ontologics.Rcheck/ontologics’
- Version: 1.0.3
- GitHub: NA
- Source code: https://github.com/cran/OVtool
- Date/Publication: 2021-11-02 08:10:07 UTC
- Number of recursive dependencies: 156
Run revdepcheck::cloud_details(, "OVtool") for more info
- checking whether package ‘OVtool’ can be installed ... ERROR
Installation failed. See ‘/tmp/workdir/OVtool/new/OVtool.Rcheck/00install.out’ for details.
* installing *source* package ‘OVtool’ ...
** package ‘OVtool’ successfully unpacked and MD5 sums checked
** using staged installation
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
Error: package or namespace load failed for ‘twang’ in loadNamespace(j <- i[[1L]], c(lib.loc, .libPaths()), versionCheck = vI[[j]]):
namespace ‘Matrix’ 1.5-4.1 is already loaded, but >= 1.6.0 is required
Execution halted
ERROR: lazy loading failed for package ‘OVtool’
* removing ‘/tmp/workdir/OVtool/new/OVtool.Rcheck/OVtool’
* installing *source* package ‘OVtool’ ...
** package ‘OVtool’ successfully unpacked and MD5 sums checked
** using staged installation
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
Error: package or namespace load failed for ‘twang’ in loadNamespace(j <- i[[1L]], c(lib.loc, .libPaths()), versionCheck = vI[[j]]):
namespace ‘Matrix’ 1.5-4.1 is already loaded, but >= 1.6.0 is required
Execution halted
ERROR: lazy loading failed for package ‘OVtool’
* removing ‘/tmp/workdir/OVtool/old/OVtool.Rcheck/OVtool’
- Version: 0.5.93
- GitHub: https://github.com/adibender/pammtools
- Source code: https://github.com/cran/pammtools
- Date/Publication: 2024-02-25 10:10:02 UTC
- Number of recursive dependencies: 124
Run revdepcheck::cloud_details(, "pammtools") for more info
* using log directory ‘/tmp/workdir/pammtools/new/pammtools.Rcheck’
* using R version 4.3.1 (2023-06-16)
* using platform: x86_64-pc-linux-gnu (64-bit)
* R was compiled by
gcc (Ubuntu 13.2.0-23ubuntu4) 13.2.0
GNU Fortran (Ubuntu 13.2.0-23ubuntu4) 13.2.0
* running under: Ubuntu 24.04.1 LTS
* using session charset: UTF-8
* using option ‘--no-manual’
* checking for file ‘pammtools/DESCRIPTION’ ... OK
...
* checking data for non-ASCII characters ... OK
* checking LazyData ... OK
* checking data for ASCII and uncompressed saves ... OK
* checking R/sysdata.rda ... OK
* checking examples ... OK
* checking for unstated dependencies in ‘tests’ ... OK
* checking tests ... OK
Running ‘testthat.R’
* DONE
Status: OK
* using log directory ‘/tmp/workdir/pammtools/old/pammtools.Rcheck’
* using R version 4.3.1 (2023-06-16)
* using platform: x86_64-pc-linux-gnu (64-bit)
* R was compiled by
gcc (Ubuntu 13.2.0-23ubuntu4) 13.2.0
GNU Fortran (Ubuntu 13.2.0-23ubuntu4) 13.2.0
* running under: Ubuntu 24.04.1 LTS
* using session charset: UTF-8
* using option ‘--no-manual’
* checking for file ‘pammtools/DESCRIPTION’ ... OK
...
* checking data for non-ASCII characters ... OK
* checking LazyData ... OK
* checking data for ASCII and uncompressed saves ... OK
* checking R/sysdata.rda ... OK
* checking examples ... OK
* checking for unstated dependencies in ‘tests’ ... OK
* checking tests ... OK
Running ‘testthat.R’
* DONE
Status: OK
- Version: 0.1.3
- GitHub: NA
- Source code: https://github.com/cran/pathwayTMB
- Date/Publication: 2022-08-09 13:50:02 UTC
- Number of recursive dependencies: 226
Run revdepcheck::cloud_details(, "pathwayTMB") for more info
* using log directory ‘/tmp/workdir/pathwayTMB/new/pathwayTMB.Rcheck’
* using R version 4.3.1 (2023-06-16)
* using platform: x86_64-pc-linux-gnu (64-bit)
* R was compiled by
gcc (Ubuntu 13.2.0-23ubuntu4) 13.2.0
GNU Fortran (Ubuntu 13.2.0-23ubuntu4) 13.2.0
* running under: Ubuntu 24.04.1 LTS
* using session charset: UTF-8
* using option ‘--no-manual’
* checking for file ‘pathwayTMB/DESCRIPTION’ ... OK
...
* this is package ‘pathwayTMB’ version ‘0.1.3’
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... ERROR
Package required but not available: ‘clusterProfiler’
See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
manual.
* DONE
Status: 1 ERROR
* using log directory ‘/tmp/workdir/pathwayTMB/old/pathwayTMB.Rcheck’
* using R version 4.3.1 (2023-06-16)
* using platform: x86_64-pc-linux-gnu (64-bit)
* R was compiled by
gcc (Ubuntu 13.2.0-23ubuntu4) 13.2.0
GNU Fortran (Ubuntu 13.2.0-23ubuntu4) 13.2.0
* running under: Ubuntu 24.04.1 LTS
* using session charset: UTF-8
* using option ‘--no-manual’
* checking for file ‘pathwayTMB/DESCRIPTION’ ... OK
...
* this is package ‘pathwayTMB’ version ‘0.1.3’
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... ERROR
Package required but not available: ‘clusterProfiler’
See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
manual.
* DONE
Status: 1 ERROR
- Version: 2.2.2
- GitHub: NA
- Source code: https://github.com/cran/pencal
- Date/Publication: 2024-06-12 11:10:02 UTC
- Number of recursive dependencies: 174
Run revdepcheck::cloud_details(, "pencal") for more info
* using log directory ‘/tmp/workdir/pencal/new/pencal.Rcheck’
* using R version 4.3.1 (2023-06-16)
* using platform: x86_64-pc-linux-gnu (64-bit)
* R was compiled by
gcc (Ubuntu 13.2.0-23ubuntu4) 13.2.0
GNU Fortran (Ubuntu 13.2.0-23ubuntu4) 13.2.0
* running under: Ubuntu 24.04.1 LTS
* using session charset: UTF-8
* using option ‘--no-manual’
* checking for file ‘pencal/DESCRIPTION’ ... OK
...
* checking package namespace information ... OK
* checking package dependencies ... ERROR
Package required but not available: ‘riskRegression’
Package suggested but not available for checking: ‘ptmixed’
See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
manual.
* DONE
Status: 1 ERROR
* using log directory ‘/tmp/workdir/pencal/old/pencal.Rcheck’
* using R version 4.3.1 (2023-06-16)
* using platform: x86_64-pc-linux-gnu (64-bit)
* R was compiled by
gcc (Ubuntu 13.2.0-23ubuntu4) 13.2.0
GNU Fortran (Ubuntu 13.2.0-23ubuntu4) 13.2.0
* running under: Ubuntu 24.04.1 LTS
* using session charset: UTF-8
* using option ‘--no-manual’
* checking for file ‘pencal/DESCRIPTION’ ... OK
...
* checking package namespace information ... OK
* checking package dependencies ... ERROR
Package required but not available: ‘riskRegression’
Package suggested but not available for checking: ‘ptmixed’
See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
manual.
* DONE
Status: 1 ERROR
- Version: 0.0.1
- GitHub: NA
- Source code: https://github.com/cran/quid
- Date/Publication: 2021-12-09 09:00:02 UTC
- Number of recursive dependencies: 94
Run revdepcheck::cloud_details(, "quid") for more info
- checking whether package ‘quid’ can be installed ... ERROR
Installation failed. See ‘/tmp/workdir/quid/new/quid.Rcheck/00install.out’ for details.
* installing *source* package ‘quid’ ...
** package ‘quid’ successfully unpacked and MD5 sums checked
** using staged installation
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
Error in loadNamespace(j <- i[[1L]], c(lib.loc, .libPaths()), versionCheck = vI[[j]]) :
namespace ‘Matrix’ 1.5-4.1 is already loaded, but >= 1.6.0 is required
Calls: <Anonymous> ... namespaceImportFrom -> asNamespace -> loadNamespace
Execution halted
ERROR: lazy loading failed for package ‘quid’
* removing ‘/tmp/workdir/quid/new/quid.Rcheck/quid’
* installing *source* package ‘quid’ ...
** package ‘quid’ successfully unpacked and MD5 sums checked
** using staged installation
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
Error in loadNamespace(j <- i[[1L]], c(lib.loc, .libPaths()), versionCheck = vI[[j]]) :
namespace ‘Matrix’ 1.5-4.1 is already loaded, but >= 1.6.0 is required
Calls: <Anonymous> ... namespaceImportFrom -> asNamespace -> loadNamespace
Execution halted
ERROR: lazy loading failed for package ‘quid’
* removing ‘/tmp/workdir/quid/old/quid.Rcheck/quid’
- Version: 0.2.9
- GitHub: https://github.com/ropensci/rdflib
- Source code: https://github.com/cran/rdflib
- Date/Publication: 2024-08-17 06:00:05 UTC
- Number of recursive dependencies: 93
Run revdepcheck::cloud_details(, "rdflib") for more info
- checking whether package ‘rdflib’ can be installed ... ERROR
Installation failed. See ‘/tmp/workdir/rdflib/new/rdflib.Rcheck/00install.out’ for details.
* installing *source* package ‘rdflib’ ...
** package ‘rdflib’ successfully unpacked and MD5 sums checked
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
Error in dyn.load(file, DLLpath = DLLpath, ...) :
unable to load shared object '/usr/local/lib/R/site-library/redland/libs/redland.so':
librdf.so.0: cannot open shared object file: No such file or directory
Calls: <Anonymous> ... asNamespace -> loadNamespace -> library.dynam -> dyn.load
Execution halted
ERROR: lazy loading failed for package ‘rdflib’
* removing ‘/tmp/workdir/rdflib/new/rdflib.Rcheck/rdflib’
* installing *source* package ‘rdflib’ ...
** package ‘rdflib’ successfully unpacked and MD5 sums checked
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
Error in dyn.load(file, DLLpath = DLLpath, ...) :
unable to load shared object '/usr/local/lib/R/site-library/redland/libs/redland.so':
librdf.so.0: cannot open shared object file: No such file or directory
Calls: <Anonymous> ... asNamespace -> loadNamespace -> library.dynam -> dyn.load
Execution halted
ERROR: lazy loading failed for package ‘rdflib’
* removing ‘/tmp/workdir/rdflib/old/rdflib.Rcheck/rdflib’
- Version: NA
- GitHub: NA
- Source code: https://github.com/cran/rmlnomogram
- Number of recursive dependencies: 181
Run revdepcheck::cloud_details(, "rmlnomogram") for more info
- Version: 0.2.4
- GitHub: https://github.com/Chabert-Liddell/robber
- Source code: https://github.com/cran/robber
- Date/Publication: 2024-02-07 13:50:02 UTC
- Number of recursive dependencies: 143
Run revdepcheck::cloud_details(, "robber") for more info
* using log directory ‘/tmp/workdir/robber/new/robber.Rcheck’
* using R version 4.3.1 (2023-06-16)
* using platform: x86_64-pc-linux-gnu (64-bit)
* R was compiled by
gcc (Ubuntu 13.2.0-23ubuntu4) 13.2.0
GNU Fortran (Ubuntu 13.2.0-23ubuntu4) 13.2.0
* running under: Ubuntu 24.04.1 LTS
* using session charset: UTF-8
* using option ‘--no-manual’
* checking for file ‘robber/DESCRIPTION’ ... OK
...
* checking tests ... OK
Running ‘spelling.R’
Running ‘testthat.R’
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes in ‘inst/doc’ ... OK
* checking running R code from vignettes ... OK
‘topological-analysis.Rmd’ using ‘UTF-8’... OK
* checking re-building of vignette outputs ... OK
* DONE
Status: OK
* using log directory ‘/tmp/workdir/robber/old/robber.Rcheck’
* using R version 4.3.1 (2023-06-16)
* using platform: x86_64-pc-linux-gnu (64-bit)
* R was compiled by
gcc (Ubuntu 13.2.0-23ubuntu4) 13.2.0
GNU Fortran (Ubuntu 13.2.0-23ubuntu4) 13.2.0
* running under: Ubuntu 24.04.1 LTS
* using session charset: UTF-8
* using option ‘--no-manual’
* checking for file ‘robber/DESCRIPTION’ ... OK
...
* checking tests ... OK
Running ‘spelling.R’
Running ‘testthat.R’
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes in ‘inst/doc’ ... OK
* checking running R code from vignettes ... OK
‘topological-analysis.Rmd’ using ‘UTF-8’... OK
* checking re-building of vignette outputs ... OK
* DONE
Status: OK
- Version: NA
- GitHub: NA
- Source code: https://github.com/cran/rplec
- Number of recursive dependencies: 122
Run revdepcheck::cloud_details(, "rplec") for more info
- Version: 0.0.5
- GitHub: https://github.com/THERMOSTATS/RVA
- Source code: https://github.com/cran/RVA
- Date/Publication: 2021-11-01 21:40:02 UTC
- Number of recursive dependencies: 210
Run revdepcheck::cloud_details(, "RVA") for more info
* using log directory ‘/tmp/workdir/RVA/new/RVA.Rcheck’
* using R version 4.3.1 (2023-06-16)
* using platform: x86_64-pc-linux-gnu (64-bit)
* R was compiled by
gcc (Ubuntu 13.2.0-23ubuntu4) 13.2.0
GNU Fortran (Ubuntu 13.2.0-23ubuntu4) 13.2.0
* running under: Ubuntu 24.04.1 LTS
* using session charset: UTF-8
* using option ‘--no-manual’
* checking for file ‘RVA/DESCRIPTION’ ... OK
...
* this is package ‘RVA’ version ‘0.0.5’
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... ERROR
Package required but not available: ‘clusterProfiler’
See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
manual.
* DONE
Status: 1 ERROR
* using log directory ‘/tmp/workdir/RVA/old/RVA.Rcheck’
* using R version 4.3.1 (2023-06-16)
* using platform: x86_64-pc-linux-gnu (64-bit)
* R was compiled by
gcc (Ubuntu 13.2.0-23ubuntu4) 13.2.0
GNU Fortran (Ubuntu 13.2.0-23ubuntu4) 13.2.0
* running under: Ubuntu 24.04.1 LTS
* using session charset: UTF-8
* using option ‘--no-manual’
* checking for file ‘RVA/DESCRIPTION’ ... OK
...
* this is package ‘RVA’ version ‘0.0.5’
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... ERROR
Package required but not available: ‘clusterProfiler’
See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
manual.
* DONE
Status: 1 ERROR
- Version: 3.0.1
- GitHub: https://github.com/samuel-marsh/scCustomize
- Source code: https://github.com/cran/scCustomize
- Date/Publication: 2024-12-18 18:40:02 UTC
- Number of recursive dependencies: 272
Run revdepcheck::cloud_details(, "scCustomize") for more info
-
checking whether package ‘scCustomize’ can be installed ... ERROR
Installation failed. See ‘/tmp/workdir/scCustomize/new/scCustomize.Rcheck/00install.out’ for details. -
checking package dependencies ... NOTE
Package suggested but not available for checking: ‘Nebulosa’
* installing *source* package ‘scCustomize’ ...
** package ‘scCustomize’ successfully unpacked and MD5 sums checked
** using staged installation
** R
** data
*** moving datasets to lazyload DB
** byte-compile and prepare package for lazy loading
Error: package or namespace load failed for ‘SeuratObject’ in loadNamespace(j <- i[[1L]], c(lib.loc, .libPaths()), versionCheck = vI[[j]]):
namespace ‘Matrix’ 1.5-4.1 is being loaded, but >= 1.6.4 is required
Execution halted
ERROR: lazy loading failed for package ‘scCustomize’
* removing ‘/tmp/workdir/scCustomize/new/scCustomize.Rcheck/scCustomize’
* installing *source* package ‘scCustomize’ ...
** package ‘scCustomize’ successfully unpacked and MD5 sums checked
** using staged installation
** R
** data
*** moving datasets to lazyload DB
** byte-compile and prepare package for lazy loading
Error: package or namespace load failed for ‘SeuratObject’ in loadNamespace(j <- i[[1L]], c(lib.loc, .libPaths()), versionCheck = vI[[j]]):
namespace ‘Matrix’ 1.5-4.1 is being loaded, but >= 1.6.4 is required
Execution halted
ERROR: lazy loading failed for package ‘scCustomize’
* removing ‘/tmp/workdir/scCustomize/old/scCustomize.Rcheck/scCustomize’
- Version: 2.2.6
- GitHub: NA
- Source code: https://github.com/cran/scpi
- Date/Publication: 2024-11-11 23:40:02 UTC
- Number of recursive dependencies: 96
Run revdepcheck::cloud_details(, "scpi") for more info
- checking whether package ‘scpi’ can be installed ... ERROR
Installation failed. See ‘/tmp/workdir/scpi/new/scpi.Rcheck/00install.out’ for details.
* installing *source* package ‘scpi’ ...
** package ‘scpi’ successfully unpacked and MD5 sums checked
** using staged installation
** R
** data
*** moving datasets to lazyload DB
** byte-compile and prepare package for lazy loading
Warning in .recacheSubclasses(def@className, def, env) :
undefined subclass "pcorMatrix" of class "ConstVal"; definition not updated
Warning in .recacheSubclasses(def@className, def, env) :
...
Warning in .recacheSubclasses(def@className, def, env) :
undefined subclass "pcorMatrix" of class "ConstValORExpr"; definition not updated
Warning in .recacheSubclasses(def@className, def, env) :
undefined subclass "pcorMatrix" of class "ConstValORNULL"; definition not updated
Error in loadNamespace(j <- i[[1L]], c(lib.loc, .libPaths()), versionCheck = vI[[j]]) :
namespace ‘Matrix’ 1.5-4.1 is already loaded, but >= 1.6.0 is required
Calls: <Anonymous> ... namespaceImportFrom -> asNamespace -> loadNamespace
Execution halted
ERROR: lazy loading failed for package ‘scpi’
* removing ‘/tmp/workdir/scpi/new/scpi.Rcheck/scpi’
* installing *source* package ‘scpi’ ...
** package ‘scpi’ successfully unpacked and MD5 sums checked
** using staged installation
** R
** data
*** moving datasets to lazyload DB
** byte-compile and prepare package for lazy loading
Warning in .recacheSubclasses(def@className, def, env) :
undefined subclass "pcorMatrix" of class "ConstVal"; definition not updated
Warning in .recacheSubclasses(def@className, def, env) :
...
Warning in .recacheSubclasses(def@className, def, env) :
undefined subclass "pcorMatrix" of class "ConstValORExpr"; definition not updated
Warning in .recacheSubclasses(def@className, def, env) :
undefined subclass "pcorMatrix" of class "ConstValORNULL"; definition not updated
Error in loadNamespace(j <- i[[1L]], c(lib.loc, .libPaths()), versionCheck = vI[[j]]) :
namespace ‘Matrix’ 1.5-4.1 is already loaded, but >= 1.6.0 is required
Calls: <Anonymous> ... namespaceImportFrom -> asNamespace -> loadNamespace
Execution halted
ERROR: lazy loading failed for package ‘scpi’
* removing ‘/tmp/workdir/scpi/old/scpi.Rcheck/scpi’
- Version: 2.0.2
- GitHub: https://github.com/enblacar/SCpubr
- Source code: https://github.com/cran/SCpubr
- Date/Publication: 2023-10-11 09:50:02 UTC
- Number of recursive dependencies: 301
Run revdepcheck::cloud_details(, "SCpubr") for more info
* using log directory ‘/tmp/workdir/SCpubr/new/SCpubr.Rcheck’
* using R version 4.3.1 (2023-06-16)
* using platform: x86_64-pc-linux-gnu (64-bit)
* R was compiled by
gcc (Ubuntu 13.2.0-23ubuntu4) 13.2.0
GNU Fortran (Ubuntu 13.2.0-23ubuntu4) 13.2.0
* running under: Ubuntu 24.04.1 LTS
* using session charset: UTF-8
* using option ‘--no-manual’
* checking for file ‘SCpubr/DESCRIPTION’ ... OK
...
* checking for unstated dependencies in ‘tests’ ... OK
* checking tests ... OK
Running ‘testthat.R’
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes in ‘inst/doc’ ... OK
* checking running R code from vignettes ... NONE
‘reference_manual.Rmd’ using ‘UTF-8’... OK
* checking re-building of vignette outputs ... OK
* DONE
Status: 2 NOTEs
* using log directory ‘/tmp/workdir/SCpubr/old/SCpubr.Rcheck’
* using R version 4.3.1 (2023-06-16)
* using platform: x86_64-pc-linux-gnu (64-bit)
* R was compiled by
gcc (Ubuntu 13.2.0-23ubuntu4) 13.2.0
GNU Fortran (Ubuntu 13.2.0-23ubuntu4) 13.2.0
* running under: Ubuntu 24.04.1 LTS
* using session charset: UTF-8
* using option ‘--no-manual’
* checking for file ‘SCpubr/DESCRIPTION’ ... OK
...
* checking for unstated dependencies in ‘tests’ ... OK
* checking tests ... OK
Running ‘testthat.R’
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes in ‘inst/doc’ ... OK
* checking running R code from vignettes ... NONE
‘reference_manual.Rmd’ using ‘UTF-8’... OK
* checking re-building of vignette outputs ... OK
* DONE
Status: 2 NOTEs
- Version: 2019.2
- GitHub: NA
- Source code: https://github.com/cran/SEERaBomb
- Date/Publication: 2019-12-12 18:50:03 UTC
- Number of recursive dependencies: 185
Run revdepcheck::cloud_details(, "SEERaBomb") for more info
- checking whether package ‘SEERaBomb’ can be installed ... ERROR
Installation failed. See ‘/tmp/workdir/SEERaBomb/new/SEERaBomb.Rcheck/00install.out’ for details.
* installing *source* package ‘SEERaBomb’ ...
** package ‘SEERaBomb’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C compiler: ‘gcc (Ubuntu 13.2.0-23ubuntu4) 13.2.0’
using C++ compiler: ‘g++ (Ubuntu 13.2.0-23ubuntu4) 13.2.0’
g++ -std=gnu++17 -I"/opt/R/4.3.1/lib/R/include" -DNDEBUG -I'/usr/local/lib/R/site-library/Rcpp/include' -I/usr/local/include -fpic -g -O2 -c RcppExports.cpp -o RcppExports.o
gcc -I"/opt/R/4.3.1/lib/R/include" -DNDEBUG -I'/usr/local/lib/R/site-library/Rcpp/include' -I/usr/local/include -fpic -g -O2 -c SEERaBomb_init.c -o SEERaBomb_init.o
g++ -std=gnu++17 -I"/opt/R/4.3.1/lib/R/include" -DNDEBUG -I'/usr/local/lib/R/site-library/Rcpp/include' -I/usr/local/include -fpic -g -O2 -c fillPYM.cpp -o fillPYM.o
g++ -std=gnu++17 -shared -L/opt/R/4.3.1/lib/R/lib -L/usr/local/lib -o SEERaBomb.so RcppExports.o SEERaBomb_init.o fillPYM.o -L/opt/R/4.3.1/lib/R/lib -lR
...
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
Error: package or namespace load failed for ‘demography’ in loadNamespace(j <- i[[1L]], c(lib.loc, .libPaths()), versionCheck = vI[[j]]):
namespace ‘Matrix’ 1.5-4.1 is already loaded, but >= 1.6.0 is required
Execution halted
ERROR: lazy loading failed for package ‘SEERaBomb’
* removing ‘/tmp/workdir/SEERaBomb/new/SEERaBomb.Rcheck/SEERaBomb’
* installing *source* package ‘SEERaBomb’ ...
** package ‘SEERaBomb’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C compiler: ‘gcc (Ubuntu 13.2.0-23ubuntu4) 13.2.0’
using C++ compiler: ‘g++ (Ubuntu 13.2.0-23ubuntu4) 13.2.0’
g++ -std=gnu++17 -I"/opt/R/4.3.1/lib/R/include" -DNDEBUG -I'/usr/local/lib/R/site-library/Rcpp/include' -I/usr/local/include -fpic -g -O2 -c RcppExports.cpp -o RcppExports.o
gcc -I"/opt/R/4.3.1/lib/R/include" -DNDEBUG -I'/usr/local/lib/R/site-library/Rcpp/include' -I/usr/local/include -fpic -g -O2 -c SEERaBomb_init.c -o SEERaBomb_init.o
g++ -std=gnu++17 -I"/opt/R/4.3.1/lib/R/include" -DNDEBUG -I'/usr/local/lib/R/site-library/Rcpp/include' -I/usr/local/include -fpic -g -O2 -c fillPYM.cpp -o fillPYM.o
g++ -std=gnu++17 -shared -L/opt/R/4.3.1/lib/R/lib -L/usr/local/lib -o SEERaBomb.so RcppExports.o SEERaBomb_init.o fillPYM.o -L/opt/R/4.3.1/lib/R/lib -lR
...
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
Error: package or namespace load failed for ‘demography’ in loadNamespace(j <- i[[1L]], c(lib.loc, .libPaths()), versionCheck = vI[[j]]):
namespace ‘Matrix’ 1.5-4.1 is already loaded, but >= 1.6.0 is required
Execution halted
ERROR: lazy loading failed for package ‘SEERaBomb’
* removing ‘/tmp/workdir/SEERaBomb/old/SEERaBomb.Rcheck/SEERaBomb’
- Version: NA
- GitHub: NA
- Source code: https://github.com/cran/SensIAT
- Number of recursive dependencies: 60
Run revdepcheck::cloud_details(, "SensIAT") for more info
- Version: 0.2.0
- GitHub: https://github.com/arcaldwell49/SimplyAgree
- Source code: https://github.com/cran/SimplyAgree
- Date/Publication: 2024-03-21 14:20:06 UTC
- Number of recursive dependencies: 118
Run revdepcheck::cloud_details(, "SimplyAgree") for more info
- checking whether package ‘SimplyAgree’ can be installed ... ERROR
Installation failed. See ‘/tmp/workdir/SimplyAgree/new/SimplyAgree.Rcheck/00install.out’ for details.
* installing *source* package ‘SimplyAgree’ ...
** package ‘SimplyAgree’ successfully unpacked and MD5 sums checked
** using staged installation
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
Warning in check_dep_version() :
ABI version mismatch:
lme4 was built with Matrix ABI version 1
Current Matrix ABI version is 0
Please re-install lme4 from source or restore original ‘Matrix’ package
Error in loadNamespace(j <- i[[1L]], c(lib.loc, .libPaths()), versionCheck = vI[[j]]) :
namespace ‘Matrix’ 1.5-4.1 is already loaded, but >= 1.6.0 is required
Calls: <Anonymous> ... namespaceImportFrom -> asNamespace -> loadNamespace
Execution halted
ERROR: lazy loading failed for package ‘SimplyAgree’
* removing ‘/tmp/workdir/SimplyAgree/new/SimplyAgree.Rcheck/SimplyAgree’
* installing *source* package ‘SimplyAgree’ ...
** package ‘SimplyAgree’ successfully unpacked and MD5 sums checked
** using staged installation
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
Warning in check_dep_version() :
ABI version mismatch:
lme4 was built with Matrix ABI version 1
Current Matrix ABI version is 0
Please re-install lme4 from source or restore original ‘Matrix’ package
Error in loadNamespace(j <- i[[1L]], c(lib.loc, .libPaths()), versionCheck = vI[[j]]) :
namespace ‘Matrix’ 1.5-4.1 is already loaded, but >= 1.6.0 is required
Calls: <Anonymous> ... namespaceImportFrom -> asNamespace -> loadNamespace
Execution halted
ERROR: lazy loading failed for package ‘SimplyAgree’
* removing ‘/tmp/workdir/SimplyAgree/old/SimplyAgree.Rcheck/SimplyAgree’
- Version: 0.1.1
- GitHub: NA
- Source code: https://github.com/cran/ssdGSA
- Date/Publication: 2024-07-26 23:10:02 UTC
- Number of recursive dependencies: 174
Run revdepcheck::cloud_details(, "ssdGSA") for more info
* using log directory ‘/tmp/workdir/ssdGSA/new/ssdGSA.Rcheck’
* using R version 4.3.1 (2023-06-16)
* using platform: x86_64-pc-linux-gnu (64-bit)
* R was compiled by
gcc (Ubuntu 13.2.0-23ubuntu4) 13.2.0
GNU Fortran (Ubuntu 13.2.0-23ubuntu4) 13.2.0
* running under: Ubuntu 24.04.1 LTS
* using session charset: UTF-8
* using option ‘--no-manual’
* checking for file ‘ssdGSA/DESCRIPTION’ ... OK
...
* this is package ‘ssdGSA’ version ‘0.1.1’
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... ERROR
Package required but not available: ‘clusterProfiler’
See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
manual.
* DONE
Status: 1 ERROR
* using log directory ‘/tmp/workdir/ssdGSA/old/ssdGSA.Rcheck’
* using R version 4.3.1 (2023-06-16)
* using platform: x86_64-pc-linux-gnu (64-bit)
* R was compiled by
gcc (Ubuntu 13.2.0-23ubuntu4) 13.2.0
GNU Fortran (Ubuntu 13.2.0-23ubuntu4) 13.2.0
* running under: Ubuntu 24.04.1 LTS
* using session charset: UTF-8
* using option ‘--no-manual’
* checking for file ‘ssdGSA/DESCRIPTION’ ... OK
...
* this is package ‘ssdGSA’ version ‘0.1.1’
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... ERROR
Package required but not available: ‘clusterProfiler’
See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
manual.
* DONE
Status: 1 ERROR
- Version: 2.0.5
- GitHub: NA
- Source code: https://github.com/cran/SSHAARP
- Date/Publication: 2024-12-11 07:50:06 UTC
- Number of recursive dependencies: 123
Run revdepcheck::cloud_details(, "SSHAARP") for more info
* using log directory ‘/tmp/workdir/SSHAARP/new/SSHAARP.Rcheck’
* using R version 4.3.1 (2023-06-16)
* using platform: x86_64-pc-linux-gnu (64-bit)
* R was compiled by
gcc (Ubuntu 13.2.0-23ubuntu4) 13.2.0
GNU Fortran (Ubuntu 13.2.0-23ubuntu4) 13.2.0
* running under: Ubuntu 24.04.1 LTS
* using session charset: UTF-8
* using option ‘--no-manual’
* checking for file ‘SSHAARP/DESCRIPTION’ ... OK
...
* checking installed files from ‘inst/doc’ ... OK
* checking files in ‘vignettes’ ... OK
* checking examples ... OK
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes in ‘inst/doc’ ... OK
* checking running R code from vignettes ... OK
‘vignette.Rmd’ using ‘UTF-8’... OK
* checking re-building of vignette outputs ... OK
* DONE
Status: OK
* using log directory ‘/tmp/workdir/SSHAARP/old/SSHAARP.Rcheck’
* using R version 4.3.1 (2023-06-16)
* using platform: x86_64-pc-linux-gnu (64-bit)
* R was compiled by
gcc (Ubuntu 13.2.0-23ubuntu4) 13.2.0
GNU Fortran (Ubuntu 13.2.0-23ubuntu4) 13.2.0
* running under: Ubuntu 24.04.1 LTS
* using session charset: UTF-8
* using option ‘--no-manual’
* checking for file ‘SSHAARP/DESCRIPTION’ ... OK
...
* checking installed files from ‘inst/doc’ ... OK
* checking files in ‘vignettes’ ... OK
* checking examples ... OK
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes in ‘inst/doc’ ... OK
* checking running R code from vignettes ... OK
‘vignette.Rmd’ using ‘UTF-8’... OK
* checking re-building of vignette outputs ... OK
* DONE
Status: OK
- Version: 1.0.6
- GitHub: NA
- Source code: https://github.com/cran/stabiliser
- Date/Publication: 2023-05-17 11:00:05 UTC
- Number of recursive dependencies: 151
Run revdepcheck::cloud_details(, "stabiliser") for more info
- checking whether package ‘stabiliser’ can be installed ... ERROR
Installation failed. See ‘/tmp/workdir/stabiliser/new/stabiliser.Rcheck/00install.out’ for details.
* installing *source* package ‘stabiliser’ ...
** package ‘stabiliser’ successfully unpacked and MD5 sums checked
** using staged installation
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
Error in loadNamespace(i, c(lib.loc, .libPaths()), versionCheck = vI[[i]]) :
there is no package called ‘maditr’
Calls: <Anonymous> ... loadNamespace -> withRestarts -> withOneRestart -> doWithOneRestart
Execution halted
ERROR: lazy loading failed for package ‘stabiliser’
* removing ‘/tmp/workdir/stabiliser/new/stabiliser.Rcheck/stabiliser’
* installing *source* package ‘stabiliser’ ...
** package ‘stabiliser’ successfully unpacked and MD5 sums checked
** using staged installation
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
Error in loadNamespace(i, c(lib.loc, .libPaths()), versionCheck = vI[[i]]) :
there is no package called ‘maditr’
Calls: <Anonymous> ... loadNamespace -> withRestarts -> withOneRestart -> doWithOneRestart
Execution halted
ERROR: lazy loading failed for package ‘stabiliser’
* removing ‘/tmp/workdir/stabiliser/old/stabiliser.Rcheck/stabiliser’
- Version: 0.8.0
- GitHub: https://github.com/stemangiola/tidyseurat
- Source code: https://github.com/cran/tidyseurat
- Date/Publication: 2024-01-10 04:50:02 UTC
- Number of recursive dependencies: 196
Run revdepcheck::cloud_details(, "tidyseurat") for more info
- checking whether package ‘tidyseurat’ can be installed ... ERROR
Installation failed. See ‘/tmp/workdir/tidyseurat/new/tidyseurat.Rcheck/00install.out’ for details.
* installing *source* package ‘tidyseurat’ ...
** package ‘tidyseurat’ successfully unpacked and MD5 sums checked
** using staged installation
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
Error: package or namespace load failed for ‘SeuratObject’ in loadNamespace(j <- i[[1L]], c(lib.loc, .libPaths()), versionCheck = vI[[j]]):
namespace ‘Matrix’ 1.5-4.1 is already loaded, but >= 1.6.4 is required
Execution halted
ERROR: lazy loading failed for package ‘tidyseurat’
* removing ‘/tmp/workdir/tidyseurat/new/tidyseurat.Rcheck/tidyseurat’
* installing *source* package ‘tidyseurat’ ...
** package ‘tidyseurat’ successfully unpacked and MD5 sums checked
** using staged installation
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
Error: package or namespace load failed for ‘SeuratObject’ in loadNamespace(j <- i[[1L]], c(lib.loc, .libPaths()), versionCheck = vI[[j]]):
namespace ‘Matrix’ 1.5-4.1 is already loaded, but >= 1.6.4 is required
Execution halted
ERROR: lazy loading failed for package ‘tidyseurat’
* removing ‘/tmp/workdir/tidyseurat/old/tidyseurat.Rcheck/tidyseurat’
- Version: 1.0.2
- GitHub: https://github.com/alexander-pastukhov/tridim-regression
- Source code: https://github.com/cran/TriDimRegression
- Date/Publication: 2023-09-13 14:10:03 UTC
- Number of recursive dependencies: 98
Run revdepcheck::cloud_details(, "TriDimRegression") for more info
- checking whether package ‘TriDimRegression’ can be installed ... ERROR
Installation failed. See ‘/tmp/workdir/TriDimRegression/new/TriDimRegression.Rcheck/00install.out’ for details.
* installing *source* package ‘TriDimRegression’ ...
** package ‘TriDimRegression’ successfully unpacked and MD5 sums checked
** using staged installation
Error in loadNamespace(x) : there is no package called ‘rstantools’
Calls: loadNamespace -> withRestarts -> withOneRestart -> doWithOneRestart
Execution halted
ERROR: configuration failed for package ‘TriDimRegression’
* removing ‘/tmp/workdir/TriDimRegression/new/TriDimRegression.Rcheck/TriDimRegression’
* installing *source* package ‘TriDimRegression’ ...
** package ‘TriDimRegression’ successfully unpacked and MD5 sums checked
** using staged installation
Error in loadNamespace(x) : there is no package called ‘rstantools’
Calls: loadNamespace -> withRestarts -> withOneRestart -> doWithOneRestart
Execution halted
ERROR: configuration failed for package ‘TriDimRegression’
* removing ‘/tmp/workdir/TriDimRegression/old/TriDimRegression.Rcheck/TriDimRegression’
- Version: 1.1.4
- GitHub: https://github.com/fawda123/WRTDStidal
- Source code: https://github.com/cran/WRTDStidal
- Date/Publication: 2023-10-20 09:00:11 UTC
- Number of recursive dependencies: 139
Run revdepcheck::cloud_details(, "WRTDStidal") for more info
- checking whether package ‘WRTDStidal’ can be installed ... ERROR
Installation failed. See ‘/tmp/workdir/WRTDStidal/new/WRTDStidal.Rcheck/00install.out’ for details.
* installing *source* package ‘WRTDStidal’ ...
** package ‘WRTDStidal’ successfully unpacked and MD5 sums checked
** using staged installation
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
Error in loadNamespace(j <- i[[1L]], c(lib.loc, .libPaths()), versionCheck = vI[[j]]) :
namespace ‘Matrix’ 1.5-4.1 is already loaded, but >= 1.6.0 is required
Calls: <Anonymous> ... namespaceImportFrom -> asNamespace -> loadNamespace
Execution halted
ERROR: lazy loading failed for package ‘WRTDStidal’
* removing ‘/tmp/workdir/WRTDStidal/new/WRTDStidal.Rcheck/WRTDStidal’
* installing *source* package ‘WRTDStidal’ ...
** package ‘WRTDStidal’ successfully unpacked and MD5 sums checked
** using staged installation
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
Error in loadNamespace(j <- i[[1L]], c(lib.loc, .libPaths()), versionCheck = vI[[j]]) :
namespace ‘Matrix’ 1.5-4.1 is already loaded, but >= 1.6.0 is required
Calls: <Anonymous> ... namespaceImportFrom -> asNamespace -> loadNamespace
Execution halted
ERROR: lazy loading failed for package ‘WRTDStidal’
* removing ‘/tmp/workdir/WRTDStidal/old/WRTDStidal.Rcheck/WRTDStidal’