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Fix setenv PATH modifications being overwritten #1589

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Job	Run time
tox env type-min on ubuntu-24.04	36s
tox env docs on windows-2025	1m 13s
test 3.13 on windows-2025	59s
tox env type on ubuntu-24.04	38s
tox env docs on ubuntu-24.04	28s
test 3.14 on ubuntu-24.04	20s
test 3.14 on macos-15	32s
test 3.13 on ubuntu-24.04	19s
test 3.14 on windows-2025	46s
test 3.12 on ubuntu-24.04	31s
test 3.12 on windows-2025	59s
test 3.13 on macos-15	47s
tox env type on windows-2025	1m 18s
test 3.12 on macos-15	47s
tox env pkg_meta on ubuntu-24.04	26s
tox env dev on ubuntu-24.04	30s
test 3.10 on ubuntu-24.04	18s
tox env dev on windows-2025	1m 9s
test 3.11 on windows-2025	46s
test 3.10 on macos-15	25s
tox env type-min on windows-2025	1m 33s
tox env pkg_meta on windows-2025	54s
test 3.11 on ubuntu-24.04	18s
test 3.11 on macos-15	28s
test 3.10 on windows-2025	1m 6s
	18m 6s