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Fix setenv PATH modifications being overwritten #1596

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Job	Run time
tox env docs on ubuntu-24.04	32s
tox env type on windows-2025	1m 34s
test 3.14 on macos-15	33s
test 3.13 on ubuntu-24.04	18s
tox env pkg_meta on ubuntu-24.04	35s
tox env type-min on ubuntu-24.04	38s
tox env type-min on windows-2025	2m 21s
test 3.13 on macos-15	34s
test 3.12 on windows-2025	57s
test 3.12 on macos-15	47s
tox env docs on windows-2025	1m 22s
tox env dev on windows-2025	1m 16s
test 3.10 on macos-15	1m 2s
test 3.11 on windows-2025	50s
test 3.11 on ubuntu-24.04	18s
test 3.11 on macos-15	54s
test 3.10 on windows-2025	50s
test 3.14 on windows-2025	47s
test 3.10 on ubuntu-24.04	19s
tox env dev on ubuntu-24.04	38s
test 3.12 on ubuntu-24.04	20s
test 3.13 on windows-2025	50s
tox env pkg_meta on windows-2025	50s
tox env type on ubuntu-24.04	38s
test 3.14 on ubuntu-24.04	30s
	20m 13s