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Enhancement: Google Cloud/Batch and Colab Integration #13

@benjibromberg

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@benjibromberg

Description of feature

This enhancement proposes integrating Google Cloud services to provide alternative methods for running the tucca-rna-seq workflow. Specifically, this would involve:

  1. Google Colab Notebooks: Develop and provide Google Colab notebooks that allow users to run the workflow in a hosted environment. This lowers the barrier to entry for users who may not have the local resources or technical expertise to set up the workflow locally.
  2. Google Cloud Batch Integration: Implement support for executing the Snakemake workflow on Google Cloud Batch. This would enable scalable, parallel execution of the workflow on cloud infrastructure, which is ideal for large datasets.

These features would significantly improve the accessibility and scalability of the workflow.

Related Branch

This work is related to the feat/notebook-updates branch, which contains the initial versions of the Jupyter notebooks for running the workflow.

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