Use https for CRAN URLs.

git-svn-id: https://svn.r-project.org/R/trunk@71127 00db46b3-68df-0310-9c12-caf00c1e9a41

Author: hornik

INSTALL

@@ -12,7 +12,7 @@ and Administration Manual', an HTML copy of which is available as file
 if you are impatient, read on but please refer to the manual to
 resolve any problems.  (If you obtained R using Subversion, the manual
 is at doc/manual/R-admin.texi and can be read online at
-http://cran.r-project.org/manuals.html.)
+https://CRAN.R-project.org/manuals.html.)
 
 
 SIMPLE COMPILATION

README

@@ -36,7 +36,7 @@ presentations.
 A package specification allows the production of loadable modules for
 specific purposes, and several thousand contributed packages are made
 available through the CRAN sites (see
-http://CRAN.R-project.org/mirrors.html for the current members).
+https://CRAN.R-project.org/mirrors.html for the current members).
 
 
 2. HISTORY

doc/html/NEWS.2.html

@@ -332,7 +332,7 @@ <h4>NEW FEATURES</h4>
 </li>
 <li> <p><code>qqline()</code> has new optional arguments
 <code>distribution</code>, <code>probs</code> and <code>qtype</code>, following the
-example of <a href="http://CRAN.R-project.org/package=lattice"><span class="pkg">lattice</span></a>'s <code>panel.qqmathline()</code>.
+example of <a href="https://CRAN.R-project.org/package=lattice"><span class="pkg">lattice</span></a>'s <code>panel.qqmathline()</code>.
 </p>
 </li>
 <li><p> The handling of single quotes in the <code>en@quot</code>
@@ -760,7 +760,7 @@ <h4>BUG FIXES</h4>
 </p>
 </li>
 <li> <p><code>parallel::stopCluster()</code> now works with MPI
-clusters without <a href="http://CRAN.R-project.org/package=snow"><span class="pkg">snow</span></a> being on the search path.
+clusters without <a href="https://CRAN.R-project.org/package=snow"><span class="pkg">snow</span></a> being on the search path.
 </p>
 </li>
 <li> <p><code>terms.formula()</code> could exhaust the stack, and the
@@ -897,7 +897,7 @@ <h4>NEW FEATURES</h4>
 <li> <p><code>splineDesign()</code> and <code>spline.des()</code> in package
 <span class="pkg">splines</span> have a new option <code>sparse</code> which can be used
 for efficient construction of a sparse B-spline design matrix
-(<em>via</em> <a href="http://CRAN.R-project.org/package=Matrix"><span class="pkg">Matrix</span></a>).
+(<em>via</em> <a href="https://CRAN.R-project.org/package=Matrix"><span class="pkg">Matrix</span></a>).
 </p>
 </li>
 <li> <p><code>norm()</code> now allows <code>type = "2"</code> (the
@@ -1032,8 +1032,8 @@ <h4>INSTALLATION</h4>
 <li> <p><code>R CMD INSTALL</code> with <span class="env">_R_CHECK_INSTALL_DEPENDS_</span>
 set to a true value (as done by <code>R CMD check --as-cran</code>)
 now restricts the packages available when lazy-loading as well
-as when test-loading (since packages such as <a href="http://CRAN.R-project.org/package=ETLUtils"><span class="pkg">ETLUtils</span></a>
-and <a href="http://CRAN.R-project.org/package=agsemisc"><span class="pkg">agsemisc</span></a> had top-level calls to <code>library()</code>
+as when test-loading (since packages such as <a href="https://CRAN.R-project.org/package=ETLUtils"><span class="pkg">ETLUtils</span></a>
+and <a href="https://CRAN.R-project.org/package=agsemisc"><span class="pkg">agsemisc</span></a> had top-level calls to <code>library()</code>
 for undeclared packages).
 </p>
 <p>This check is now also available on Windows.
@@ -1099,7 +1099,7 @@ <h4>BUG FIXES</h4>
 </p>
 </li>
 <li><p> Nonsense uses such as <code>seq(1:50, by = 5)</code> (from package
-<a href="http://CRAN.R-project.org/package=plotrix"><span class="pkg">plotrix</span></a>) and <code>seq.int(1:50, by = 5)</code> are now errors.
+<a href="https://CRAN.R-project.org/package=plotrix"><span class="pkg">plotrix</span></a>) and <code>seq.int(1:50, by = 5)</code> are now errors.
 </p>
 </li>
 <li><p> The residuals in the 5-number summary printed by
@@ -2119,7 +2119,7 @@ <h4>NEW FEATURES</h4>
 </p>
 </li>
 <li> <p><code>tempfile()</code> on a Unix-alike now takes the process ID
-into account.  This is needed with <a href="http://CRAN.R-project.org/package=multicore"><span class="pkg">multicore</span></a> (and as part of
+into account.  This is needed with <a href="https://CRAN.R-project.org/package=multicore"><span class="pkg">multicore</span></a> (and as part of
 <span class="pkg">parallel</span>) because the parent and all the children share a
 session temporary directory, and they can share the C random
 number stream used to produce the unique part.  Further, two
@@ -2340,17 +2340,17 @@ <h4>SIGNIFICANT USER-VISIBLE CHANGES</h4>
 <li><p> There is a new package <span class="pkg">parallel</span>.
 </p>
 <p>It incorporates (slightly revised) copies of packages
-<a href="http://CRAN.R-project.org/package=multicore"><span class="pkg">multicore</span></a> and <a href="http://CRAN.R-project.org/package=snow"><span class="pkg">snow</span></a> (excluding MPI, PVM and NWS
+<a href="https://CRAN.R-project.org/package=multicore"><span class="pkg">multicore</span></a> and <a href="https://CRAN.R-project.org/package=snow"><span class="pkg">snow</span></a> (excluding MPI, PVM and NWS
 clusters).  Code written to use the higher-level API functions in
 those packages should work unchanged (apart from changing any
 references to their namespaces to a reference to <span class="pkg">parallel</span>,
-and links explicitly to <a href="http://CRAN.R-project.org/package=multicore"><span class="pkg">multicore</span></a> or <a href="http://CRAN.R-project.org/package=snow"><span class="pkg">snow</span></a> on help
+and links explicitly to <a href="https://CRAN.R-project.org/package=multicore"><span class="pkg">multicore</span></a> or <a href="https://CRAN.R-project.org/package=snow"><span class="pkg">snow</span></a> on help
 pages).
 </p>
 <p>It also contains support for multiple RNG streams following
 L'Ecuyer <em>et al</em> (2002), with support for both
-<code>mclapply</code> and <a href="http://CRAN.R-project.org/package=snow"><span class="pkg">snow</span></a> clusters.  This replaces functions
-like <code>clusterSetupRNG()</code> from <a href="http://CRAN.R-project.org/package=snow"><span class="pkg">snow</span></a> (which are not in
+<code>mclapply</code> and <a href="https://CRAN.R-project.org/package=snow"><span class="pkg">snow</span></a> clusters.  This replaces functions
+like <code>clusterSetupRNG()</code> from <a href="https://CRAN.R-project.org/package=snow"><span class="pkg">snow</span></a> (which are not in
 <span class="pkg">parallel</span>).
 </p>
 <p>The version released for <span style="font-family: Courier New, Courier; color: #666666;"><b>R</b></span> 2.14.0 contains base functionality:
@@ -2715,7 +2715,7 @@ <h4>NEW FEATURES</h4>
 </p>
 </li>
 <li> <p><code>socketConnection()</code> now has a <code>timeout</code> argument.
-It is now documented that large values (package <a href="http://CRAN.R-project.org/package=snow"><span class="pkg">snow</span></a> used a
+It is now documented that large values (package <a href="https://CRAN.R-project.org/package=snow"><span class="pkg">snow</span></a> used a
 year) do not work on some OSes.
 </p>
 </li>
@@ -3836,7 +3836,7 @@ <h4>LICENCE</h4>
 
 <ul>
 <li><p> No parts of <span style="font-family: Courier New, Courier; color: #666666;"><b>R</b></span> are now licensed solely under GPL-2.  The
-licences for packages <a href="http://CRAN.R-project.org/package=rpart"><span class="pkg">rpart</span></a> and <a href="http://CRAN.R-project.org/package=survival"><span class="pkg">survival</span></a> have been
+licences for packages <a href="https://CRAN.R-project.org/package=rpart"><span class="pkg">rpart</span></a> and <a href="https://CRAN.R-project.org/package=survival"><span class="pkg">survival</span></a> have been
 changed, which means that the licence terms for <span style="font-family: Courier New, Courier; color: #666666;"><b>R</b></span> as distributed
 are GPL-2 | GPL-3.
 </p>
@@ -5154,7 +5154,7 @@ <h4>INSTALLATION</h4>
 <ul>
 <li><p> The <span class="samp">zlib</span> sources in the distribution are now built
 with all symbols remapped: this is intended to avoid problems seen
-with packages such as <a href="http://CRAN.R-project.org/package=XML"><span class="pkg">XML</span></a> and <a href="http://CRAN.R-project.org/package=rggobi"><span class="pkg">rggobi</span></a> which link to
+with packages such as <a href="https://CRAN.R-project.org/package=XML"><span class="pkg">XML</span></a> and <a href="https://CRAN.R-project.org/package=rggobi"><span class="pkg">rggobi</span></a> which link to
 &lsquo;<span class="file">zlib.so.1</span>&rsquo; on systems using <span class="samp">zlib 1.2.5</span>.
 </p>
 </li>
@@ -5179,7 +5179,7 @@ <h4>PACKAGE INSTALLATION</h4>
 </li>
 <li><p> Files &lsquo;<span class="file">R/sysdata.rda</span>&rsquo; of more than 1Mb are now stored
 in the lazyload database using <code>xz</code> compression: this for
-example halves the installed size of package <a href="http://CRAN.R-project.org/package=Imap"><span class="pkg">Imap</span></a>.
+example halves the installed size of package <a href="https://CRAN.R-project.org/package=Imap"><span class="pkg">Imap</span></a>.
 </p>
 </li>
 <li> <p><code>R CMD INSTALL</code> now ensures that directories
@@ -5343,7 +5343,7 @@ <h4>BUG FIXES</h4>
 contributed by Martin Morgan).
 </p>
 </li>
-<li><p> In some circumstances (including for package <a href="http://CRAN.R-project.org/package=XML"><span class="pkg">XML</span></a>),
+<li><p> In some circumstances (including for package <a href="https://CRAN.R-project.org/package=XML"><span class="pkg">XML</span></a>),
 <code>R CMD INSTALL</code> installed version-control directories from
 source packages.
 </p>
@@ -5658,7 +5658,7 @@ <h4>NEW FEATURES</h4>
 objects now insert linebreaks in long calls in the same way that
 the <code>print()</code> methods for <code>"summary.[g]lm"</code> objects
 have long done.  This does change the layout of the examples for
-a number of packages, e.g. <a href="http://CRAN.R-project.org/package=MASS"><span class="pkg">MASS</span></a>.  (<a href="https://bugs.R-project.org/bugzilla3/show_bug.cgi?id=14250">PR#14250</a>)
+a number of packages, e.g. <a href="https://CRAN.R-project.org/package=MASS"><span class="pkg">MASS</span></a>.  (<a href="https://bugs.R-project.org/bugzilla3/show_bug.cgi?id=14250">PR#14250</a>)
 </p>
 </li>
 <li> <p><code>constrOptim()</code> can now be used with method
@@ -8304,7 +8304,7 @@ <h4>NEW FEATURES</h4>
 </p>
 </li>
 <li> <p><code>xtabs()</code> with the new argument <code>sparse = TRUE</code>
-now returns a sparse Matrix, using package <a href="http://CRAN.R-project.org/package=Matrix"><span class="pkg">Matrix</span></a>.
+now returns a sparse Matrix, using package <a href="https://CRAN.R-project.org/package=Matrix"><span class="pkg">Matrix</span></a>.
 </p>
 </li>
 <li> <p><code>contr.sum()</code> etc gain an argument <code>sparse</code>
@@ -8771,7 +8771,7 @@ <h4>COMPRESSION</h4>
 <span class="option">--data-compress=xz</span>, often giving even better compression
 on large datasets at the expense of much longer installation
 times.  (The latter is used for the recommended packages: it is
-particularly effective for <a href="http://CRAN.R-project.org/package=survival"><span class="pkg">survival</span></a>.)
+particularly effective for <a href="https://CRAN.R-project.org/package=survival"><span class="pkg">survival</span></a>.)
 </p>
 </li>
 <li> <p><code>file()</code> for open = <code>""</code>, <code>"r"</code> or

share/texmf/bibtex/bib/Rnews.bib

@@ -1,27 +1,27 @@
-@String{http = "http://CRAN.R-project.org/doc/Rnews/"}
-@String{Rnews2001-1 = "http://CRAN.R-project.org/doc/Rnews/Rnews_2001-1.pdf"}
-@String{Rnews2001-2 = "http://CRAN.R-project.org/doc/Rnews/Rnews_2001-2.pdf"}
-@String{Rnews2001-3 = "http://CRAN.R-project.org/doc/Rnews/Rnews_2001-3.pdf"}
-@String{Rnews2002-1 = "http://CRAN.R-project.org/doc/Rnews/Rnews_2002-1.pdf"}
-@String{Rnews2002-2 = "http://CRAN.R-project.org/doc/Rnews/Rnews_2002-2.pdf"}
-@String{Rnews2002-3 = "http://CRAN.R-project.org/doc/Rnews/Rnews_2002-3.pdf"}
-@String{Rnews2003-1 = "http://CRAN.R-project.org/doc/Rnews/Rnews_2003-1.pdf"}
-@String{Rnews2003-2 = "http://CRAN.R-project.org/doc/Rnews/Rnews_2003-2.pdf"}
-@String{Rnews2003-3 = "http://CRAN.R-project.org/doc/Rnews/Rnews_2003-3.pdf"}
-@String{Rnews2004-1 = "http://CRAN.R-project.org/doc/Rnews/Rnews_2004-1.pdf"}
-@String{Rnews2004-2 = "http://CRAN.R-project.org/doc/Rnews/Rnews_2004-2.pdf"}
-@String{Rnews2005-1 = "http://CRAN.R-project.org/doc/Rnews/Rnews_2005-1.pdf"}
-@String{Rnews2005-2 = "http://CRAN.R-project.org/doc/Rnews/Rnews_2005-2.pdf"}
-@String{Rnews2006-1 = "http://CRAN.R-project.org/doc/Rnews/Rnews_2006-1.pdf"}
-@String{Rnews2006-2 = "http://CRAN.R-project.org/doc/Rnews/Rnews_2006-2.pdf"}
-@String{Rnews2006-3 = "http://CRAN.R-project.org/doc/Rnews/Rnews_2006-3.pdf"}
-@String{Rnews2006-4 = "http://CRAN.R-project.org/doc/Rnews/Rnews_2006-4.pdf"}
-@String{Rnews2006-5 = "http://CRAN.R-project.org/doc/Rnews/Rnews_2006-5.pdf"}
-@String{Rnews2007-1 = "http://CRAN.R-project.org/doc/Rnews/Rnews_2007-1.pdf"}
-@String{Rnews2007-2 = "http://CRAN.R-project.org/doc/Rnews/Rnews_2007-2.pdf"}
-@String{Rnews2007-3 = "http://CRAN.R-project.org/doc/Rnews/Rnews_2007-3.pdf"}
-@String{Rnews2008-1 = "http://CRAN.R-project.org/doc/Rnews/Rnews_2008-1.pdf"}
-@String{Rnews2008-2 = "http://CRAN.R-project.org/doc/Rnews/Rnews_2008-2.pdf"}
+@String{http = "https://CRAN.R-project.org/doc/Rnews/"}
+@String{Rnews2001-1 = "https://CRAN.R-project.org/doc/Rnews/Rnews_2001-1.pdf"}
+@String{Rnews2001-2 = "https://CRAN.R-project.org/doc/Rnews/Rnews_2001-2.pdf"}
+@String{Rnews2001-3 = "https://CRAN.R-project.org/doc/Rnews/Rnews_2001-3.pdf"}
+@String{Rnews2002-1 = "https://CRAN.R-project.org/doc/Rnews/Rnews_2002-1.pdf"}
+@String{Rnews2002-2 = "https://CRAN.R-project.org/doc/Rnews/Rnews_2002-2.pdf"}
+@String{Rnews2002-3 = "https://CRAN.R-project.org/doc/Rnews/Rnews_2002-3.pdf"}
+@String{Rnews2003-1 = "https://CRAN.R-project.org/doc/Rnews/Rnews_2003-1.pdf"}
+@String{Rnews2003-2 = "https://CRAN.R-project.org/doc/Rnews/Rnews_2003-2.pdf"}
+@String{Rnews2003-3 = "https://CRAN.R-project.org/doc/Rnews/Rnews_2003-3.pdf"}
+@String{Rnews2004-1 = "https://CRAN.R-project.org/doc/Rnews/Rnews_2004-1.pdf"}
+@String{Rnews2004-2 = "https://CRAN.R-project.org/doc/Rnews/Rnews_2004-2.pdf"}
+@String{Rnews2005-1 = "https://CRAN.R-project.org/doc/Rnews/Rnews_2005-1.pdf"}
+@String{Rnews2005-2 = "https://CRAN.R-project.org/doc/Rnews/Rnews_2005-2.pdf"}
+@String{Rnews2006-1 = "https://CRAN.R-project.org/doc/Rnews/Rnews_2006-1.pdf"}
+@String{Rnews2006-2 = "https://CRAN.R-project.org/doc/Rnews/Rnews_2006-2.pdf"}
+@String{Rnews2006-3 = "https://CRAN.R-project.org/doc/Rnews/Rnews_2006-3.pdf"}
+@String{Rnews2006-4 = "https://CRAN.R-project.org/doc/Rnews/Rnews_2006-4.pdf"}
+@String{Rnews2006-5 = "https://CRAN.R-project.org/doc/Rnews/Rnews_2006-5.pdf"}
+@String{Rnews2007-1 = "https://CRAN.R-project.org/doc/Rnews/Rnews_2007-1.pdf"}
+@String{Rnews2007-2 = "https://CRAN.R-project.org/doc/Rnews/Rnews_2007-2.pdf"}
+@String{Rnews2007-3 = "https://CRAN.R-project.org/doc/Rnews/Rnews_2007-3.pdf"}
+@String{Rnews2008-1 = "https://CRAN.R-project.org/doc/Rnews/Rnews_2008-1.pdf"}
+@String{Rnews2008-2 = "https://CRAN.R-project.org/doc/Rnews/Rnews_2008-2.pdf"}
 
 @Article{Rnews:Tierney:2001,
   author       = {Luke Tierney},
@@ -2351,7 +2351,7 @@ @Article{Rnews:Leisch:2007
   number       = 2,
   pages        = {53--54},
   month        = {October},
-  url          = {http://CRAN.R-project.org/doc/Rnews/}
+  url          = {https://CRAN.R-project.org/doc/Rnews/}
 }
 
 @Article{Rnews:Oh+Kim:2007,

src/library/base/man/Extract.Rd

@@ -310,7 +310,7 @@ x$name <- value
   \code{\link{NULL}} for details of indexing null objects.
 }
 %% Fixme: Link (to html in 'help.start()', pdf from 'ref manual',
-%% 'info' from ESS, see \url{http://cran.R-project.org/manuals.html}.
+%% 'info' from ESS, see \url{https://CRAN.R-project.org/manuals.html}.
 
 \examples{
 x <- 1:12