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Suggest Seurat 4.1.1 or greater
Move SingleCellExperiment to suggests
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DESCRIPTION

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@@ -2,17 +2,17 @@ Package: harmony
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Title: Fast, Sensitive, and Accurate Integration of Single Cell Data
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Version: 0.1.0
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Authors@R: c(
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person("Ilya", "Korsunsky", email = "ilya.korsunsky@gmail.com",
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person("Ilya", "Korsunsky", email = "ilya.korsunsky@gmail.com",
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role = c("cre", "aut"), comment = c(ORCID = "0000-0003-4848-3948")),
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person("Nghia", "Millard", email = "nmillard@g.harvard.edu",
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person("Nghia", "Millard", email = "nmillard@g.harvard.edu",
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role = "aut", comment = c(ORCID = "0000-0002-0518-7674")),
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person("Jean", "Fan", email = "jeanfan@fas.harvard.edu",
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role = c("aut", "ctb"), comment = c(ORCID = "0000-0002-0212-5451")),
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person("Kamil", "Slowikowski", email = "kslowikowski@gmail.com",
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role = c("aut", "ctb"), comment = c(ORCID = "0000-0002-2843-6370")),
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person("Miles", "Smith",
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person("Miles", "Smith",
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role = c("ctb")),
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person("Soumya", "Raychaudhuri",
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person("Soumya", "Raychaudhuri",
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role = c("aut"), comment = c(ORCID = "0000-0002-1901-8265"))
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)
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Description: Implementation of the Harmony algorithm for single cell integration, described in Korsunsky et al <doi.org/10.1101/461954>. Package includes a standalone Harmony function and interfaces to external frameworks.
@@ -24,18 +24,18 @@ Depends: R(>= 3.4.0), Rcpp
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LazyData: true
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LinkingTo: Rcpp, RcppArmadillo, RcppProgress
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Imports:
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dplyr,
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dplyr,
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cowplot,
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tidyr,
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ggplot2,
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ggplot2,
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irlba,
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Matrix,
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methods,
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tibble,
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rlang,
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SingleCellExperiment
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rlang
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Suggests:
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Seurat,
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SingleCellExperiment,
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Seurat (>= 4.1.1),
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testthat,
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knitr,
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rmarkdown

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