Add missing includes to new_neurite_extension_event.h #583
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| name: Singularity Integration | |
| on: | |
| push: | |
| branches: | |
| - master | |
| pull_request: | |
| types: [opened, synchronize, reopened] | |
| concurrency: | |
| group: ${{ github.workflow }}-${{ github.event.pull_request.number || github.ref }} | |
| cancel-in-progress: true | |
| jobs: | |
| build: | |
| name: Build | |
| runs-on: ubuntu-latest | |
| container: | |
| image: quay.io/singularity/singularity:v3.9.0 | |
| options: "--privileged --workdir /data" | |
| steps: | |
| - uses: actions/checkout@v4 | |
| - name: Add root user to subuid and subgid... | |
| run: | | |
| echo root:100000:65536 >> /etc/subuid | |
| echo root:100000:65536 >> /etc/subgid | |
| - name: Set correct branch... | |
| run: | | |
| export GITHUB_BRANCH_NAME=${{ github.head_ref || github.ref_name }} | |
| sed -i "s|BDM_BRANCH=\"master\"|BDM_BRANCH=\"$GITHUB_BRANCH_NAME\"|" Singularity | |
| - name: Build singularity image... | |
| run: | | |
| chmod 777 . | |
| singularity build --fakeroot Singularity.sif Singularity | |
| - name: Source Biodynamo and run demo... | |
| run: | | |
| singularity exec --cleanenv -i Singularity.sif bash -c "source /biodynamo/build/third_party/root/bin/thisroot.sh && source /biodynamo/build/bin/thisbdm.sh && \ | |
| export DISPLAY=:99.0 && /biodynamo/util/xvfb-initd.sh start && cd $(mktemp -d) && bdm demo tumor_concept && cd tumor_concept && bdm clean && bdm run" |