DIncalciLab
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- samurai Public
A bioinformatics best-practice analysis pipeline for the analysis of shallow whole genome sequencing (sWGS) data for the identification of copy number alterations (CNAs).
DIncalciLab/samurai’s past year of commit activity - nf-core-modules Public Forked from nf-core/modules
Repository to host tool-specific module files for the Nextflow DSL2 community!
DIncalciLab/nf-core-modules’s past year of commit activity - mgikit-multiqc Public Forked from sagc-bioinformatics/mgikit-multiqc
MultiQC plugin to parse and integrate reports generated by mgikit demultiplexer
DIncalciLab/mgikit-multiqc’s past year of commit activity - bioconda-recipes Public Forked from bioconda/bioconda-recipes
Conda recipes for the bioconda channel.
DIncalciLab/bioconda-recipes’s past year of commit activity - PureCN Public Forked from lima1/PureCN
Copy number calling and variant classification using targeted short read sequencing
DIncalciLab/PureCN’s past year of commit activity - sarek Public Forked from nf-core/sarek
Analysis pipeline to detect germline or somatic variants (pre-processing, variant calling and annotation) from WGS / targeted sequencing
DIncalciLab/sarek’s past year of commit activity - checkQC Public Forked from Molmed/checkQC
CheckQC inspects the content of an Illumina runfolder and determines if it passes a set of quality criteria
DIncalciLab/checkQC’s past year of commit activity - SAMURAI_paper_scripts Public
DIncalciLab/SAMURAI_paper_scripts’s past year of commit activity
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