Remove workaround/hook for GROMACS SVE issue #132

bedroge · 2025-11-18T08:34:39Z

First testing this for GROMACS 2024.1 and Neoverse V1 + Grace, but the hook was also applied for 2024.3+4 on Grace CPUs. So, if this works, I'll do test builds for the latter versions as well, as I'm not sure if those versions had the same issues as encountered on for instance A64FX (if so, they should be solved as well with the new easyconfig).

bedroge · 2025-11-18T08:34:55Z

bot: build repo:eessi.io-2023.06-software instance:eessi-bot-mc-aws for:arch=aarch64/neoverse_v1
bot: build repo:eessi.io-2023.06-software instance:eessi-bot-jsc for:arch=aarch64/nvidia/grace

eessi-bot-aws · 2025-11-18T08:35:02Z

New job on instance eessi-bot-mc-aws for repository eessi.io-2023.06-software
Building on: neoverse_v1
Building for: aarch64/neoverse_v1
Job dir: /project/def-users/SHARED/jobs/2025.11/pr_132/105648

date	job status	comment
Nov 18 08:35:00 UTC 2025	submitted	job id `105648` awaits release by job manager
Nov 18 08:36:00 UTC 2025	released	job awaits launch by Slurm scheduler
Nov 18 08:41:03 UTC 2025	running	job `105648` is running
Nov 18 09:43:18 UTC 2025	finished	😁 SUCCESS (click triangle for details) Details ✅ job output file `slurm-105648.out` ✅ no message matching `FATAL:` ✅ no message matching `ERROR:` ✅ no message matching `FAILED:` ✅ no message matching `required modules missing:` ✅ found message(s) matching `No missing installations` ✅ found message matching `.tar.* created!` Artefacts `eessi-2023.06-software-linux-aarch64-neoverse_v1-17634583360.tar.zst` size: 44 MiB (46390633 bytes) entries: 772 modules under 2023.06/software/linux/aarch64/neoverse_v1/modules/all `GROMACS/2024.1-foss-2023b.lua` software under 2023.06/software/linux/aarch64/neoverse_v1/software `GROMACS/2024.1-foss-2023b` reprod directories under 2023.06/software/linux/aarch64/neoverse_v1/reprod no reprod directories in tarball other under 2023.06/software/linux/aarch64/neoverse_v1 `2023.06/init/easybuild/eb_hooks.py`
Nov 18 09:43:18 UTC 2025	test result	😁 SUCCESS (click triangle for details) ReFrame Summary [ OK ] ( 1/13) EESSI_GROMACS %benchmark_info=HECBioSim/Crambin %nb_impl=cpu %scale=1_node %module_name=GROMACS/2024.4-foss-2023b /b2b72766 @BotBuildTests:aarch64_neoverse_v1+default P: perf: 53.65 ns/day (r:0, l:None, u:None) [ OK ] ( 2/13) EESSI_GROMACS %benchmark_info=HECBioSim/Crambin %nb_impl=cpu %scale=1_node %module_name=GROMACS/2024.3-foss-2023b /d2fe4ce3 @BotBuildTests:aarch64_neoverse_v1+default P: perf: 50.514 ns/day (r:0, l:None, u:None) [ OK ] ( 3/13) EESSI_GROMACS %benchmark_info=HECBioSim/Crambin %nb_impl=cpu %scale=1_node %module_name=GROMACS/2024.1-foss-2023b /02920241 @BotBuildTests:aarch64_neoverse_v1+default P: perf: 59.35 ns/day (r:0, l:None, u:None) [ OK ] ( 4/13) EESSI_LAMMPS_lj %device_type=cpu %module_name=LAMMPS/29Aug2024-foss-2023b-kokkos %scale=1_node /aeb2d9df @BotBuildTests:aarch64_neoverse_v1+default P: perf: 976.706 timesteps/s (r:0, l:None, u:None) [ OK ] ( 5/13) EESSI_LAMMPS_lj %device_type=cpu %module_name=LAMMPS/2Aug2023_update2-foss-2023a-kokkos %scale=1_node /04ff9ece @BotBuildTests:aarch64_neoverse_v1+default P: perf: 980.071 timesteps/s (r:0, l:None, u:None) [ OK ] ( 6/13) EESSI_OSU_coll %benchmark_info=mpi.collective.osu_allreduce %module_name=OSU-Micro-Benchmarks/7.2-gompi-2023b %scale=1_node %device_type=cpu /775175bf @BotBuildTests:aarch64_neoverse_v1+default P: latency: 2.98 us (r:0, l:None, u:None) [ OK ] ( 7/13) EESSI_OSU_coll %benchmark_info=mpi.collective.osu_allreduce %module_name=OSU-Micro-Benchmarks/7.1-1-gompi-2023a %scale=1_node %device_type=cpu /52707c40 @BotBuildTests:aarch64_neoverse_v1+default P: latency: 3.03 us (r:0, l:None, u:None) [ OK ] ( 8/13) EESSI_OSU_coll %benchmark_info=mpi.collective.osu_alltoall %module_name=OSU-Micro-Benchmarks/7.2-gompi-2023b %scale=1_node %device_type=cpu /b1aacda9 @BotBuildTests:aarch64_neoverse_v1+default P: latency: 4.32 us (r:0, l:None, u:None) [ OK ] ( 9/13) EESSI_OSU_coll %benchmark_info=mpi.collective.osu_alltoall %module_name=OSU-Micro-Benchmarks/7.1-1-gompi-2023a %scale=1_node %device_type=cpu /c6bad193 @BotBuildTests:aarch64_neoverse_v1+default P: latency: 4.33 us (r:0, l:None, u:None) [ OK ] (10/13) EESSI_OSU_pt2pt_CPU %benchmark_info=mpi.pt2pt.osu_latency %module_name=OSU-Micro-Benchmarks/7.2-gompi-2023b %scale=1_node /15cad6c4 @BotBuildTests:aarch64_neoverse_v1+default P: latency: 0.39 us (r:0, l:None, u:None) [ OK ] (11/13) EESSI_OSU_pt2pt_CPU %benchmark_info=mpi.pt2pt.osu_latency %module_name=OSU-Micro-Benchmarks/7.1-1-gompi-2023a %scale=1_node /6672deda @BotBuildTests:aarch64_neoverse_v1+default P: latency: 0.41 us (r:0, l:None, u:None) [ OK ] (12/13) EESSI_OSU_pt2pt_CPU %benchmark_info=mpi.pt2pt.osu_bw %module_name=OSU-Micro-Benchmarks/7.2-gompi-2023b %scale=1_node /2a9a47b1 @BotBuildTests:aarch64_neoverse_v1+default P: bandwidth: 28227.04 MB/s (r:0, l:None, u:None) [ OK ] (13/13) EESSI_OSU_pt2pt_CPU %benchmark_info=mpi.pt2pt.osu_bw %module_name=OSU-Micro-Benchmarks/7.1-1-gompi-2023a %scale=1_node /1b24ab8e @BotBuildTests:aarch64_neoverse_v1+default P: bandwidth: 27870.12 MB/s (r:0, l:None, u:None) [ PASSED ] Ran 13/13 test case(s) from 13 check(s) (0 failure(s), 0 skipped, 0 aborted) Details ✅ job output file `slurm-105648.out` ✅ no message matching `ERROR:` ✅ no message matching `[\sFAILED\s].Ran . test case`

eessi-bot-jsc · 2025-11-18T08:35:04Z

New job on instance eessi-bot-jsc for repository eessi.io-2023.06-software
Building on: nvidia-grace
Building for: aarch64/nvidia/grace
Job dir: /p/project1/ceasybuilders/eessibot/jobs/2025.11/pr_132/14228770

date	job status	comment
Nov 18 08:35:03 UTC 2025	submitted	job id `14228770` awaits release by job manager
Nov 18 08:35:27 UTC 2025	released	job awaits launch by Slurm scheduler
Nov 18 08:36:31 UTC 2025	running	job `14228770` is running
Nov 18 10:19:46 UTC 2025	finished	😁 SUCCESS (click triangle for details) Details ✅ job output file `slurm-14228770.out` ✅ no message matching `FATAL:` ✅ no message matching `ERROR:` ✅ no message matching `FAILED:` ✅ no message matching `required modules missing:` ✅ found message(s) matching `No missing installations` ✅ found message matching `.tar.* created!` Artefacts `eessi-2023.06-software-linux-aarch64-nvidia-grace-17634601410.tar.gz` size: 43 MiB (45599704 bytes) entries: 772 modules under 2023.06/software/linux/aarch64/nvidia/grace/modules/all `GROMACS/2024.1-foss-2023b.lua` software under 2023.06/software/linux/aarch64/nvidia/grace/software `GROMACS/2024.1-foss-2023b` reprod directories under 2023.06/software/linux/aarch64/nvidia/grace/reprod no reprod directories in tarball other under 2023.06/software/linux/aarch64/nvidia/grace `2023.06/init/easybuild/eb_hooks.py`
Nov 18 10:19:46 UTC 2025	test result	😁 SUCCESS (click triangle for details) ReFrame Summary [ SKIP ] ( 1/33) Skipping GPU test : only 1 GPU available for this test case [ SKIP ] ( 2/33) Skipping GPU test : only 1 GPU available for this test case [ SKIP ] ( 3/33) Skipping GPU test : only 1 GPU available for this test case [ SKIP ] ( 4/33) Skipping GPU test : only 1 GPU available for this test case [ SKIP ] ( 5/33) Skipping GPU test : only 1 GPU available for this test case [ SKIP ] ( 6/33) Skipping GPU test : only 1 GPU available for this test case [ SKIP ] ( 7/33) Skipping GPU test : only 1 GPU available for this test case [ SKIP ] ( 8/33) Skipping GPU test : only 1 GPU available for this test case [ OK ] ( 9/33) EESSI_LAMMPS_lj %device_type=gpu %module_name=LAMMPS/2Aug2023_update2-foss-2023a-kokkos-CUDA-12.1.1 %scale=1_node /1f2ca7c1 @BotBuildTests:aarch64_nvidia_grace+default P: perf: 7007.125 timesteps/s (r:0, l:None, u:None) [ OK ] (10/33) EESSI_LAMMPS_lj %device_type=cpu %module_name=LAMMPS/29Aug2024-foss-2023b-kokkos %scale=1_node /aeb2d9df @BotBuildTests:aarch64_nvidia_grace+default P: perf: 1526.095 timesteps/s (r:0, l:None, u:None) [ OK ] (11/33) EESSI_LAMMPS_lj %device_type=cpu %module_name=LAMMPS/2Aug2023_update2-foss-2023a-kokkos %scale=1_node /04ff9ece @BotBuildTests:aarch64_nvidia_grace+default P: perf: 1544.506 timesteps/s (r:0, l:None, u:None) [ OK ] (12/33) EESSI_LAMMPS_lj %device_type=cpu %module_name=LAMMPS/2Aug2023_update2-foss-2023a-kokkos-CUDA-12.1.1 %scale=1_node /b22a48f5 @BotBuildTests:aarch64_nvidia_grace+default P: perf: 1524.762 timesteps/s (r:0, l:None, u:None) [ OK ] (13/33) EESSI_OSU_coll %benchmark_info=mpi.collective.osu_allreduce %module_name=OSU-Micro-Benchmarks/7.2-gompi-2023b %scale=1_node %device_type=cpu /775175bf @BotBuildTests:aarch64_nvidia_grace+default P: latency: 4.97 us (r:0, l:None, u:None) [ OK ] (14/33) EESSI_OSU_coll %benchmark_info=mpi.collective.osu_allreduce %module_name=OSU-Micro-Benchmarks/7.1-1-gompi-2023a %scale=1_node %device_type=cpu /52707c40 @BotBuildTests:aarch64_nvidia_grace+default P: latency: 4.63 us (r:0, l:None, u:None) [ OK ] (15/33) EESSI_OSU_coll %benchmark_info=mpi.collective.osu_allreduce %module_name=OSU-Micro-Benchmarks/7.5-gompi-2023b-CUDA-12.4.0 %scale=1_node %device_type=cpu /95ac9526 @BotBuildTests:aarch64_nvidia_grace+default P: latency: 5.06 us (r:0, l:None, u:None) [ OK ] (16/33) EESSI_OSU_coll %benchmark_info=mpi.collective.osu_allreduce %module_name=OSU-Micro-Benchmarks/7.2-gompi-2023a-CUDA-12.1.1 %scale=1_node %device_type=cpu /1cff5d41 @BotBuildTests:aarch64_nvidia_grace+default P: latency: 5.13 us (r:0, l:None, u:None) [ OK ] (17/33) EESSI_OSU_coll %benchmark_info=mpi.collective.osu_alltoall %module_name=OSU-Micro-Benchmarks/7.2-gompi-2023b %scale=1_node %device_type=cpu /b1aacda9 @BotBuildTests:aarch64_nvidia_grace+default P: latency: 40.32 us (r:0, l:None, u:None) [ OK ] (18/33) EESSI_OSU_coll %benchmark_info=mpi.collective.osu_alltoall %module_name=OSU-Micro-Benchmarks/7.1-1-gompi-2023a %scale=1_node %device_type=cpu /c6bad193 @BotBuildTests:aarch64_nvidia_grace+default P: latency: 7.13 us (r:0, l:None, u:None) [ OK ] (19/33) EESSI_OSU_coll %benchmark_info=mpi.collective.osu_alltoall %module_name=OSU-Micro-Benchmarks/7.5-gompi-2023b-CUDA-12.4.0 %scale=1_node %device_type=cpu /0edb8a95 @BotBuildTests:aarch64_nvidia_grace+default P: latency: 8.26 us (r:0, l:None, u:None) [ OK ] (20/33) EESSI_OSU_coll %benchmark_info=mpi.collective.osu_alltoall %module_name=OSU-Micro-Benchmarks/7.2-gompi-2023a-CUDA-12.1.1 %scale=1_node %device_type=cpu /b2ab2213 @BotBuildTests:aarch64_nvidia_grace+default P: latency: 8.16 us (r:0, l:None, u:None) [ OK ] (21/33) EESSI_OSU_pt2pt_CPU %benchmark_info=mpi.pt2pt.osu_latency %module_name=OSU-Micro-Benchmarks/7.2-gompi-2023b %scale=1_node /15cad6c4 @BotBuildTests:aarch64_nvidia_grace+default P: latency: 0.47 us (r:0, l:None, u:None) [ OK ] (22/33) EESSI_OSU_pt2pt_CPU %benchmark_info=mpi.pt2pt.osu_latency %module_name=OSU-Micro-Benchmarks/7.1-1-gompi-2023a %scale=1_node /6672deda @BotBuildTests:aarch64_nvidia_grace+default P: latency: 0.48 us (r:0, l:None, u:None) [ OK ] (23/33) EESSI_OSU_pt2pt_CPU %benchmark_info=mpi.pt2pt.osu_latency %module_name=OSU-Micro-Benchmarks/7.5-gompi-2023b-CUDA-12.4.0 %scale=1_node /8ec94746 @BotBuildTests:aarch64_nvidia_grace+default P: latency: 0.51 us (r:0, l:None, u:None) [ OK ] (24/33) EESSI_OSU_pt2pt_CPU %benchmark_info=mpi.pt2pt.osu_latency %module_name=OSU-Micro-Benchmarks/7.2-gompi-2023a-CUDA-12.1.1 %scale=1_node /1a3a497b @BotBuildTests:aarch64_nvidia_grace+default P: latency: 0.5 us (r:0, l:None, u:None) [ OK ] (25/33) EESSI_OSU_pt2pt_CPU %benchmark_info=mpi.pt2pt.osu_bw %module_name=OSU-Micro-Benchmarks/7.2-gompi-2023b %scale=1_node /2a9a47b1 @BotBuildTests:aarch64_nvidia_grace+default P: bandwidth: 41926.24 MB/s (r:0, l:None, u:None) [ OK ] (26/33) EESSI_OSU_pt2pt_CPU %benchmark_info=mpi.pt2pt.osu_bw %module_name=OSU-Micro-Benchmarks/7.1-1-gompi-2023a %scale=1_node /1b24ab8e @BotBuildTests:aarch64_nvidia_grace+default P: bandwidth: 42570.7 MB/s (r:0, l:None, u:None) [ OK ] (27/33) EESSI_OSU_pt2pt_CPU %benchmark_info=mpi.pt2pt.osu_bw %module_name=OSU-Micro-Benchmarks/7.5-gompi-2023b-CUDA-12.4.0 %scale=1_node /c9ca6dc1 @BotBuildTests:aarch64_nvidia_grace+default P: bandwidth: 40268.29 MB/s (r:0, l:None, u:None) [ OK ] (28/33) EESSI_OSU_pt2pt_CPU %benchmark_info=mpi.pt2pt.osu_bw %module_name=OSU-Micro-Benchmarks/7.2-gompi-2023a-CUDA-12.1.1 %scale=1_node /17289b2f @BotBuildTests:aarch64_nvidia_grace+default P: bandwidth: 42763.87 MB/s (r:0, l:None, u:None) [ OK ] (29/33) EESSI_GROMACS %benchmark_info=HECBioSim/Crambin %nb_impl=gpu %scale=1_node %module_name=GROMACS/2024.4-foss-2023b-CUDA-12.4.0 /00da140b @BotBuildTests:aarch64_nvidia_grace+default P: perf: 1109.625 ns/day (r:0, l:None, u:None) [ OK ] (30/33) EESSI_GROMACS %benchmark_info=HECBioSim/Crambin %nb_impl=cpu %scale=1_node %module_name=GROMACS/2024.4-foss-2023b /b2b72766 @BotBuildTests:aarch64_nvidia_grace+default P: perf: 77.584 ns/day (r:0, l:None, u:None) [ OK ] (31/33) EESSI_GROMACS %benchmark_info=HECBioSim/Crambin %nb_impl=cpu %scale=1_node %module_name=GROMACS/2024.3-foss-2023b /d2fe4ce3 @BotBuildTests:aarch64_nvidia_grace+default P: perf: 78.134 ns/day (r:0, l:None, u:None) [ OK ] (32/33) EESSI_GROMACS %benchmark_info=HECBioSim/Crambin %nb_impl=cpu %scale=1_node %module_name=GROMACS/2024.1-foss-2023b /02920241 @BotBuildTests:aarch64_nvidia_grace+default P: perf: 78.309 ns/day (r:0, l:None, u:None) [ OK ] (33/33) EESSI_GROMACS %benchmark_info=HECBioSim/Crambin %nb_impl=cpu %scale=1_node %module_name=GROMACS/2024.4-foss-2023b-CUDA-12.4.0 /af58ebf1 @BotBuildTests:aarch64_nvidia_grace+default P: perf: 93.525 ns/day (r:0, l:None, u:None) [ PASSED ] Ran 25/33 test case(s) from 33 check(s) (0 failure(s), 8 skipped, 0 aborted) Details ✅ job output file `slurm-14228770.out` ✅ no message matching `ERROR:` ✅ no message matching `[\sFAILED\s].Ran . test case`

bedroge · 2025-11-18T10:41:54Z

That worked, so let's now check 2024.3 and 2024.4 for Grace as well, since the hooks had the following condition:

            (LooseVersion(self.version) <= LooseVersion('2024.4') and cpu_target == CPU_TARGET_NVIDIA_GRACE)

bot: build repo:eessi.io-2023.06-software instance:eessi-bot-jsc for:arch=aarch64/nvidia/grace

eessi-bot-jsc · 2025-11-18T10:42:02Z

New job on instance eessi-bot-jsc for repository eessi.io-2023.06-software
Building on: nvidia-grace
Building for: aarch64/nvidia/grace
Job dir: /p/project1/ceasybuilders/eessibot/jobs/2025.11/pr_132/14229350

date	job status	comment
Nov 18 10:42:00 UTC 2025	submitted	job id `14229350` awaits release by job manager
Nov 18 10:42:58 UTC 2025	released	job awaits launch by Slurm scheduler
Nov 18 10:54:23 UTC 2025	running	job `14229350` is running
Nov 18 13:59:10 UTC 2025	finished	😁 SUCCESS (click triangle for details) Details ✅ job output file `slurm-14229350.out` ✅ no message matching `FATAL:` ✅ no message matching `ERROR:` ✅ no message matching `FAILED:` ✅ no message matching `required modules missing:` ✅ found message(s) matching `No missing installations` ✅ found message matching `.tar.* created!` Artefacts `eessi-2023.06-software-linux-aarch64-nvidia-grace-17634732550.tar.gz` size: 88 MiB (92515862 bytes) entries: 1539 modules under 2023.06/software/linux/aarch64/nvidia/grace/modules/all `GROMACS/2024.3-foss-2023b.lua` `GROMACS/2024.4-foss-2023b.lua` software under 2023.06/software/linux/aarch64/nvidia/grace/software `GROMACS/2024.3-foss-2023b` `GROMACS/2024.4-foss-2023b` reprod directories under 2023.06/software/linux/aarch64/nvidia/grace/reprod no reprod directories in tarball other under 2023.06/software/linux/aarch64/nvidia/grace `2023.06/init/easybuild/eb_hooks.py`
Nov 18 13:59:10 UTC 2025	test result	😁 SUCCESS (click triangle for details) ReFrame Summary [ SKIP ] ( 1/33) Skipping GPU test : only 1 GPU available for this test case [ SKIP ] ( 2/33) Skipping GPU test : only 1 GPU available for this test case [ SKIP ] ( 3/33) Skipping GPU test : only 1 GPU available for this test case [ SKIP ] ( 4/33) Skipping GPU test : only 1 GPU available for this test case [ SKIP ] ( 5/33) Skipping GPU test : only 1 GPU available for this test case [ SKIP ] ( 6/33) Skipping GPU test : only 1 GPU available for this test case [ SKIP ] ( 7/33) Skipping GPU test : only 1 GPU available for this test case [ SKIP ] ( 8/33) Skipping GPU test : only 1 GPU available for this test case [ OK ] ( 9/33) EESSI_LAMMPS_lj %device_type=gpu %module_name=LAMMPS/2Aug2023_update2-foss-2023a-kokkos-CUDA-12.1.1 %scale=1_node /1f2ca7c1 @BotBuildTests:aarch64_nvidia_grace+default P: perf: 6952.375 timesteps/s (r:0, l:None, u:None) [ OK ] (10/33) EESSI_LAMMPS_lj %device_type=cpu %module_name=LAMMPS/29Aug2024-foss-2023b-kokkos %scale=1_node /aeb2d9df @BotBuildTests:aarch64_nvidia_grace+default P: perf: 1538.864 timesteps/s (r:0, l:None, u:None) [ OK ] (11/33) EESSI_LAMMPS_lj %device_type=cpu %module_name=LAMMPS/2Aug2023_update2-foss-2023a-kokkos %scale=1_node /04ff9ece @BotBuildTests:aarch64_nvidia_grace+default P: perf: 1571.187 timesteps/s (r:0, l:None, u:None) [ OK ] (12/33) EESSI_LAMMPS_lj %device_type=cpu %module_name=LAMMPS/2Aug2023_update2-foss-2023a-kokkos-CUDA-12.1.1 %scale=1_node /b22a48f5 @BotBuildTests:aarch64_nvidia_grace+default P: perf: 1549.071 timesteps/s (r:0, l:None, u:None) [ OK ] (13/33) EESSI_OSU_coll %benchmark_info=mpi.collective.osu_allreduce %module_name=OSU-Micro-Benchmarks/7.2-gompi-2023b %scale=1_node %device_type=cpu /775175bf @BotBuildTests:aarch64_nvidia_grace+default P: latency: 4.97 us (r:0, l:None, u:None) [ OK ] (14/33) EESSI_OSU_coll %benchmark_info=mpi.collective.osu_allreduce %module_name=OSU-Micro-Benchmarks/7.1-1-gompi-2023a %scale=1_node %device_type=cpu /52707c40 @BotBuildTests:aarch64_nvidia_grace+default P: latency: 4.94 us (r:0, l:None, u:None) [ OK ] (15/33) EESSI_OSU_coll %benchmark_info=mpi.collective.osu_allreduce %module_name=OSU-Micro-Benchmarks/7.5-gompi-2023b-CUDA-12.4.0 %scale=1_node %device_type=cpu /95ac9526 @BotBuildTests:aarch64_nvidia_grace+default P: latency: 5.21 us (r:0, l:None, u:None) [ OK ] (16/33) EESSI_OSU_coll %benchmark_info=mpi.collective.osu_allreduce %module_name=OSU-Micro-Benchmarks/7.2-gompi-2023a-CUDA-12.1.1 %scale=1_node %device_type=cpu /1cff5d41 @BotBuildTests:aarch64_nvidia_grace+default P: latency: 5.24 us (r:0, l:None, u:None) [ OK ] (17/33) EESSI_OSU_coll %benchmark_info=mpi.collective.osu_alltoall %module_name=OSU-Micro-Benchmarks/7.2-gompi-2023b %scale=1_node %device_type=cpu /b1aacda9 @BotBuildTests:aarch64_nvidia_grace+default P: latency: 7.28 us (r:0, l:None, u:None) [ OK ] (18/33) EESSI_OSU_coll %benchmark_info=mpi.collective.osu_alltoall %module_name=OSU-Micro-Benchmarks/7.1-1-gompi-2023a %scale=1_node %device_type=cpu /c6bad193 @BotBuildTests:aarch64_nvidia_grace+default P: latency: 7.21 us (r:0, l:None, u:None) [ OK ] (19/33) EESSI_OSU_coll %benchmark_info=mpi.collective.osu_alltoall %module_name=OSU-Micro-Benchmarks/7.5-gompi-2023b-CUDA-12.4.0 %scale=1_node %device_type=cpu /0edb8a95 @BotBuildTests:aarch64_nvidia_grace+default P: latency: 8.45 us (r:0, l:None, u:None) [ OK ] (20/33) EESSI_OSU_coll %benchmark_info=mpi.collective.osu_alltoall %module_name=OSU-Micro-Benchmarks/7.2-gompi-2023a-CUDA-12.1.1 %scale=1_node %device_type=cpu /b2ab2213 @BotBuildTests:aarch64_nvidia_grace+default P: latency: 8.27 us (r:0, l:None, u:None) [ OK ] (21/33) EESSI_OSU_pt2pt_CPU %benchmark_info=mpi.pt2pt.osu_latency %module_name=OSU-Micro-Benchmarks/7.2-gompi-2023b %scale=1_node /15cad6c4 @BotBuildTests:aarch64_nvidia_grace+default P: latency: 0.51 us (r:0, l:None, u:None) [ OK ] (22/33) EESSI_OSU_pt2pt_CPU %benchmark_info=mpi.pt2pt.osu_latency %module_name=OSU-Micro-Benchmarks/7.1-1-gompi-2023a %scale=1_node /6672deda @BotBuildTests:aarch64_nvidia_grace+default P: latency: 0.47 us (r:0, l:None, u:None) [ OK ] (23/33) EESSI_OSU_pt2pt_CPU %benchmark_info=mpi.pt2pt.osu_latency %module_name=OSU-Micro-Benchmarks/7.5-gompi-2023b-CUDA-12.4.0 %scale=1_node /8ec94746 @BotBuildTests:aarch64_nvidia_grace+default P: latency: 0.5 us (r:0, l:None, u:None) [ OK ] (24/33) EESSI_OSU_pt2pt_CPU %benchmark_info=mpi.pt2pt.osu_latency %module_name=OSU-Micro-Benchmarks/7.2-gompi-2023a-CUDA-12.1.1 %scale=1_node /1a3a497b @BotBuildTests:aarch64_nvidia_grace+default P: latency: 0.5 us (r:0, l:None, u:None) [ OK ] (25/33) EESSI_OSU_pt2pt_CPU %benchmark_info=mpi.pt2pt.osu_bw %module_name=OSU-Micro-Benchmarks/7.2-gompi-2023b %scale=1_node /2a9a47b1 @BotBuildTests:aarch64_nvidia_grace+default P: bandwidth: 40625.76 MB/s (r:0, l:None, u:None) [ OK ] (26/33) EESSI_OSU_pt2pt_CPU %benchmark_info=mpi.pt2pt.osu_bw %module_name=OSU-Micro-Benchmarks/7.1-1-gompi-2023a %scale=1_node /1b24ab8e @BotBuildTests:aarch64_nvidia_grace+default P: bandwidth: 40951.09 MB/s (r:0, l:None, u:None) [ OK ] (27/33) EESSI_OSU_pt2pt_CPU %benchmark_info=mpi.pt2pt.osu_bw %module_name=OSU-Micro-Benchmarks/7.5-gompi-2023b-CUDA-12.4.0 %scale=1_node /c9ca6dc1 @BotBuildTests:aarch64_nvidia_grace+default P: bandwidth: 41590.53 MB/s (r:0, l:None, u:None) [ OK ] (28/33) EESSI_OSU_pt2pt_CPU %benchmark_info=mpi.pt2pt.osu_bw %module_name=OSU-Micro-Benchmarks/7.2-gompi-2023a-CUDA-12.1.1 %scale=1_node /17289b2f @BotBuildTests:aarch64_nvidia_grace+default P: bandwidth: 41603.24 MB/s (r:0, l:None, u:None) [ OK ] (29/33) EESSI_GROMACS %benchmark_info=HECBioSim/Crambin %nb_impl=gpu %scale=1_node %module_name=GROMACS/2024.4-foss-2023b-CUDA-12.4.0 /00da140b @BotBuildTests:aarch64_nvidia_grace+default P: perf: 1099.539 ns/day (r:0, l:None, u:None) [ OK ] (30/33) EESSI_GROMACS %benchmark_info=HECBioSim/Crambin %nb_impl=cpu %scale=1_node %module_name=GROMACS/2024.4-foss-2023b /b2b72766 @BotBuildTests:aarch64_nvidia_grace+default P: perf: 77.631 ns/day (r:0, l:None, u:None) [ OK ] (31/33) EESSI_GROMACS %benchmark_info=HECBioSim/Crambin %nb_impl=cpu %scale=1_node %module_name=GROMACS/2024.3-foss-2023b /d2fe4ce3 @BotBuildTests:aarch64_nvidia_grace+default P: perf: 78.149 ns/day (r:0, l:None, u:None) [ OK ] (32/33) EESSI_GROMACS %benchmark_info=HECBioSim/Crambin %nb_impl=cpu %scale=1_node %module_name=GROMACS/2024.1-foss-2023b /02920241 @BotBuildTests:aarch64_nvidia_grace+default P: perf: 78.324 ns/day (r:0, l:None, u:None) [ OK ] (33/33) EESSI_GROMACS %benchmark_info=HECBioSim/Crambin %nb_impl=cpu %scale=1_node %module_name=GROMACS/2024.4-foss-2023b-CUDA-12.4.0 /af58ebf1 @BotBuildTests:aarch64_nvidia_grace+default P: perf: 93.492 ns/day (r:0, l:None, u:None) [ PASSED ] Ran 25/33 test case(s) from 33 check(s) (0 failure(s), 8 skipped, 0 aborted) Details ✅ job output file `slurm-14229350.out` ✅ no message matching `ERROR:` ✅ no message matching `[\sFAILED\s].Ran . test case`

bedroge · 2025-11-18T14:46:04Z

All builds succeeded, so this confirms that the hook is no longer required. I'll remove it, then this can be merged and deployed, and finally we can do rebuilds of these GROMACS versions in the software layer repo.

bedroge · 2025-11-18T14:48:22Z

Building the new hooks file for both neoverse v1 and grace, to make sure that we don't deploy the GROMACS build from an earlier build job in this PR.

bot: build repo:eessi.io-2023.06-software instance:eessi-bot-mc-aws for:arch=aarch64/neoverse_v1
bot: build repo:eessi.io-2023.06-software instance:eessi-bot-jsc for:arch=aarch64/nvidia/grace

eessi-bot-aws · 2025-11-18T14:48:28Z

New job on instance eessi-bot-mc-aws for repository eessi.io-2023.06-software
Building on: neoverse_v1
Building for: aarch64/neoverse_v1
Job dir: /project/def-users/SHARED/jobs/2025.11/pr_132/105689

date	job status	comment
Nov 18 14:48:27 UTC 2025	submitted	job id `105689` awaits release by job manager
Nov 18 14:48:34 UTC 2025	released	job awaits launch by Slurm scheduler
Nov 18 14:49:36 UTC 2025	running	job `105689` is running
Nov 18 14:51:39 UTC 2025	finished	😁 SUCCESS (click triangle for details) Details ✅ job output file `slurm-105689.out` ✅ no message matching `FATAL:` ✅ no message matching `ERROR:` ✅ no message matching `FAILED:` ✅ no message matching `required modules missing:` ✅ found message(s) matching `No missing installations` ✅ found message matching `.tar.* created!` Artefacts `eessi-2023.06-software-linux-aarch64-neoverse_v1-17634773350.tar.zst` size: 0 MiB (22708 bytes) entries: 1 modules under 2023.06/software/linux/aarch64/neoverse_v1/modules/all no module files in tarball software under 2023.06/software/linux/aarch64/neoverse_v1/software no software packages in tarball reprod directories under 2023.06/software/linux/aarch64/neoverse_v1/reprod no reprod directories in tarball other under 2023.06/software/linux/aarch64/neoverse_v1 `2023.06/init/easybuild/eb_hooks.py`
Nov 18 14:51:39 UTC 2025	test result	😁 SUCCESS (click triangle for details) ReFrame Summary [ OK ] ( 1/10) EESSI_LAMMPS_lj %device_type=cpu %module_name=LAMMPS/29Aug2024-foss-2023b-kokkos %scale=1_node /aeb2d9df @BotBuildTests:aarch64_neoverse_v1+default P: perf: 980.57 timesteps/s (r:0, l:None, u:None) [ OK ] ( 2/10) EESSI_LAMMPS_lj %device_type=cpu %module_name=LAMMPS/2Aug2023_update2-foss-2023a-kokkos %scale=1_node /04ff9ece @BotBuildTests:aarch64_neoverse_v1+default P: perf: 984.686 timesteps/s (r:0, l:None, u:None) [ OK ] ( 3/10) EESSI_OSU_coll %benchmark_info=mpi.collective.osu_allreduce %module_name=OSU-Micro-Benchmarks/7.2-gompi-2023b %scale=1_node %device_type=cpu /775175bf @BotBuildTests:aarch64_neoverse_v1+default P: latency: 3.07 us (r:0, l:None, u:None) [ OK ] ( 4/10) EESSI_OSU_coll %benchmark_info=mpi.collective.osu_allreduce %module_name=OSU-Micro-Benchmarks/7.1-1-gompi-2023a %scale=1_node %device_type=cpu /52707c40 @BotBuildTests:aarch64_neoverse_v1+default P: latency: 3.17 us (r:0, l:None, u:None) [ OK ] ( 5/10) EESSI_OSU_coll %benchmark_info=mpi.collective.osu_alltoall %module_name=OSU-Micro-Benchmarks/7.2-gompi-2023b %scale=1_node %device_type=cpu /b1aacda9 @BotBuildTests:aarch64_neoverse_v1+default P: latency: 4.45 us (r:0, l:None, u:None) [ OK ] ( 6/10) EESSI_OSU_coll %benchmark_info=mpi.collective.osu_alltoall %module_name=OSU-Micro-Benchmarks/7.1-1-gompi-2023a %scale=1_node %device_type=cpu /c6bad193 @BotBuildTests:aarch64_neoverse_v1+default P: latency: 4.52 us (r:0, l:None, u:None) [ OK ] ( 7/10) EESSI_OSU_pt2pt_CPU %benchmark_info=mpi.pt2pt.osu_latency %module_name=OSU-Micro-Benchmarks/7.2-gompi-2023b %scale=1_node /15cad6c4 @BotBuildTests:aarch64_neoverse_v1+default P: latency: 0.42 us (r:0, l:None, u:None) [ OK ] ( 8/10) EESSI_OSU_pt2pt_CPU %benchmark_info=mpi.pt2pt.osu_latency %module_name=OSU-Micro-Benchmarks/7.1-1-gompi-2023a %scale=1_node /6672deda @BotBuildTests:aarch64_neoverse_v1+default P: latency: 0.41 us (r:0, l:None, u:None) [ OK ] ( 9/10) EESSI_OSU_pt2pt_CPU %benchmark_info=mpi.pt2pt.osu_bw %module_name=OSU-Micro-Benchmarks/7.2-gompi-2023b %scale=1_node /2a9a47b1 @BotBuildTests:aarch64_neoverse_v1+default P: bandwidth: 36479.33 MB/s (r:0, l:None, u:None) [ OK ] (10/10) EESSI_OSU_pt2pt_CPU %benchmark_info=mpi.pt2pt.osu_bw %module_name=OSU-Micro-Benchmarks/7.1-1-gompi-2023a %scale=1_node /1b24ab8e @BotBuildTests:aarch64_neoverse_v1+default P: bandwidth: 34148.56 MB/s (r:0, l:None, u:None) [ PASSED ] Ran 10/10 test case(s) from 10 check(s) (0 failure(s), 0 skipped, 0 aborted) Details ✅ job output file `slurm-105689.out` ✅ no message matching `ERROR:` ✅ no message matching `[\sFAILED\s].Ran . test case`

eessi-bot-jsc · 2025-11-18T14:48:29Z

New job on instance eessi-bot-jsc for repository eessi.io-2023.06-software
Building on: nvidia-grace
Building for: aarch64/nvidia/grace
Job dir: /p/project1/ceasybuilders/eessibot/jobs/2025.11/pr_132/14230820

date	job status	comment
Nov 18 14:48:28 UTC 2025	submitted	job id `14230820` awaits release by job manager
Nov 18 14:49:31 UTC 2025	released	job awaits launch by Slurm scheduler
Nov 18 14:50:35 UTC 2025	running	job `14230820` is running
Nov 18 14:58:51 UTC 2025	finished	😁 SUCCESS (click triangle for details) Details ✅ job output file `slurm-14230820.out` ✅ no message matching `FATAL:` ✅ no message matching `ERROR:` ✅ no message matching `FAILED:` ✅ no message matching `required modules missing:` ✅ found message(s) matching `No missing installations` ✅ found message matching `.tar.* created!` Artefacts `eessi-2023.06-software-linux-aarch64-nvidia-grace-17634774620.tar.gz` size: 0 MiB (21547 bytes) entries: 1 modules under 2023.06/software/linux/aarch64/nvidia/grace/modules/all no module files in tarball software under 2023.06/software/linux/aarch64/nvidia/grace/software no software packages in tarball reprod directories under 2023.06/software/linux/aarch64/nvidia/grace/reprod no reprod directories in tarball other under 2023.06/software/linux/aarch64/nvidia/grace `2023.06/init/easybuild/eb_hooks.py`
Nov 18 14:58:51 UTC 2025	test result	😁 SUCCESS (click triangle for details) ReFrame Summary [ SKIP ] ( 1/28) Skipping GPU test : only 1 GPU available for this test case [ SKIP ] ( 2/28) Skipping GPU test : only 1 GPU available for this test case [ SKIP ] ( 3/28) Skipping GPU test : only 1 GPU available for this test case [ SKIP ] ( 4/28) Skipping GPU test : only 1 GPU available for this test case [ SKIP ] ( 5/28) Skipping GPU test : only 1 GPU available for this test case [ SKIP ] ( 6/28) Skipping GPU test : only 1 GPU available for this test case [ SKIP ] ( 7/28) Skipping GPU test : only 1 GPU available for this test case [ SKIP ] ( 8/28) Skipping GPU test : only 1 GPU available for this test case [ OK ] ( 9/28) EESSI_LAMMPS_lj %device_type=gpu %module_name=LAMMPS/2Aug2023_update2-foss-2023a-kokkos-CUDA-12.1.1 %scale=1_node /1f2ca7c1 @BotBuildTests:aarch64_nvidia_grace+default P: perf: 7088.488 timesteps/s (r:0, l:None, u:None) [ OK ] (10/28) EESSI_LAMMPS_lj %device_type=cpu %module_name=LAMMPS/29Aug2024-foss-2023b-kokkos %scale=1_node /aeb2d9df @BotBuildTests:aarch64_nvidia_grace+default P: perf: 1528.026 timesteps/s (r:0, l:None, u:None) [ OK ] (11/28) EESSI_LAMMPS_lj %device_type=cpu %module_name=LAMMPS/2Aug2023_update2-foss-2023a-kokkos %scale=1_node /04ff9ece @BotBuildTests:aarch64_nvidia_grace+default P: perf: 1527.237 timesteps/s (r:0, l:None, u:None) [ OK ] (12/28) EESSI_LAMMPS_lj %device_type=cpu %module_name=LAMMPS/2Aug2023_update2-foss-2023a-kokkos-CUDA-12.1.1 %scale=1_node /b22a48f5 @BotBuildTests:aarch64_nvidia_grace+default P: perf: 1520.168 timesteps/s (r:0, l:None, u:None) [ OK ] (13/28) EESSI_OSU_coll %benchmark_info=mpi.collective.osu_allreduce %module_name=OSU-Micro-Benchmarks/7.2-gompi-2023b %scale=1_node %device_type=cpu /775175bf @BotBuildTests:aarch64_nvidia_grace+default P: latency: 5.21 us (r:0, l:None, u:None) [ OK ] (14/28) EESSI_OSU_coll %benchmark_info=mpi.collective.osu_allreduce %module_name=OSU-Micro-Benchmarks/7.1-1-gompi-2023a %scale=1_node %device_type=cpu /52707c40 @BotBuildTests:aarch64_nvidia_grace+default P: latency: 4.86 us (r:0, l:None, u:None) [ OK ] (15/28) EESSI_OSU_coll %benchmark_info=mpi.collective.osu_allreduce %module_name=OSU-Micro-Benchmarks/7.5-gompi-2023b-CUDA-12.4.0 %scale=1_node %device_type=cpu /95ac9526 @BotBuildTests:aarch64_nvidia_grace+default P: latency: 5.24 us (r:0, l:None, u:None) [ OK ] (16/28) EESSI_OSU_coll %benchmark_info=mpi.collective.osu_allreduce %module_name=OSU-Micro-Benchmarks/7.2-gompi-2023a-CUDA-12.1.1 %scale=1_node %device_type=cpu /1cff5d41 @BotBuildTests:aarch64_nvidia_grace+default P: latency: 5.0 us (r:0, l:None, u:None) [ OK ] (17/28) EESSI_OSU_coll %benchmark_info=mpi.collective.osu_alltoall %module_name=OSU-Micro-Benchmarks/7.2-gompi-2023b %scale=1_node %device_type=cpu /b1aacda9 @BotBuildTests:aarch64_nvidia_grace+default P: latency: 6.91 us (r:0, l:None, u:None) [ OK ] (18/28) EESSI_OSU_coll %benchmark_info=mpi.collective.osu_alltoall %module_name=OSU-Micro-Benchmarks/7.1-1-gompi-2023a %scale=1_node %device_type=cpu /c6bad193 @BotBuildTests:aarch64_nvidia_grace+default P: latency: 7.37 us (r:0, l:None, u:None) [ OK ] (19/28) EESSI_OSU_coll %benchmark_info=mpi.collective.osu_alltoall %module_name=OSU-Micro-Benchmarks/7.5-gompi-2023b-CUDA-12.4.0 %scale=1_node %device_type=cpu /0edb8a95 @BotBuildTests:aarch64_nvidia_grace+default P: latency: 8.41 us (r:0, l:None, u:None) [ OK ] (20/28) EESSI_OSU_coll %benchmark_info=mpi.collective.osu_alltoall %module_name=OSU-Micro-Benchmarks/7.2-gompi-2023a-CUDA-12.1.1 %scale=1_node %device_type=cpu /b2ab2213 @BotBuildTests:aarch64_nvidia_grace+default P: latency: 8.55 us (r:0, l:None, u:None) [ OK ] (21/28) EESSI_OSU_pt2pt_CPU %benchmark_info=mpi.pt2pt.osu_latency %module_name=OSU-Micro-Benchmarks/7.2-gompi-2023b %scale=1_node /15cad6c4 @BotBuildTests:aarch64_nvidia_grace+default P: latency: 0.46 us (r:0, l:None, u:None) [ OK ] (22/28) EESSI_OSU_pt2pt_CPU %benchmark_info=mpi.pt2pt.osu_latency %module_name=OSU-Micro-Benchmarks/7.1-1-gompi-2023a %scale=1_node /6672deda @BotBuildTests:aarch64_nvidia_grace+default P: latency: 0.46 us (r:0, l:None, u:None) [ OK ] (23/28) EESSI_OSU_pt2pt_CPU %benchmark_info=mpi.pt2pt.osu_latency %module_name=OSU-Micro-Benchmarks/7.5-gompi-2023b-CUDA-12.4.0 %scale=1_node /8ec94746 @BotBuildTests:aarch64_nvidia_grace+default P: latency: 0.51 us (r:0, l:None, u:None) [ OK ] (24/28) EESSI_OSU_pt2pt_CPU %benchmark_info=mpi.pt2pt.osu_latency %module_name=OSU-Micro-Benchmarks/7.2-gompi-2023a-CUDA-12.1.1 %scale=1_node /1a3a497b @BotBuildTests:aarch64_nvidia_grace+default P: latency: 0.49 us (r:0, l:None, u:None) [ OK ] (25/28) EESSI_OSU_pt2pt_CPU %benchmark_info=mpi.pt2pt.osu_bw %module_name=OSU-Micro-Benchmarks/7.2-gompi-2023b %scale=1_node /2a9a47b1 @BotBuildTests:aarch64_nvidia_grace+default P: bandwidth: 42154.85 MB/s (r:0, l:None, u:None) [ OK ] (26/28) EESSI_OSU_pt2pt_CPU %benchmark_info=mpi.pt2pt.osu_bw %module_name=OSU-Micro-Benchmarks/7.1-1-gompi-2023a %scale=1_node /1b24ab8e @BotBuildTests:aarch64_nvidia_grace+default P: bandwidth: 41438.54 MB/s (r:0, l:None, u:None) [ OK ] (27/28) EESSI_OSU_pt2pt_CPU %benchmark_info=mpi.pt2pt.osu_bw %module_name=OSU-Micro-Benchmarks/7.5-gompi-2023b-CUDA-12.4.0 %scale=1_node /c9ca6dc1 @BotBuildTests:aarch64_nvidia_grace+default P: bandwidth: 40109.74 MB/s (r:0, l:None, u:None) [ OK ] (28/28) EESSI_OSU_pt2pt_CPU %benchmark_info=mpi.pt2pt.osu_bw %module_name=OSU-Micro-Benchmarks/7.2-gompi-2023a-CUDA-12.1.1 %scale=1_node /17289b2f @BotBuildTests:aarch64_nvidia_grace+default P: bandwidth: 42916.44 MB/s (r:0, l:None, u:None) [ PASSED ] Ran 20/28 test case(s) from 28 check(s) (0 failure(s), 8 skipped, 0 aborted) Details ✅ job output file `slurm-14230820.out` ✅ no message matching `ERROR:` ✅ no message matching `[\sFAILED\s].Ran . test case`

bedroge · 2025-11-18T15:02:03Z

bot: build repo:eessi.io-2025.06-software instance:eessi-bot-mc-aws for:arch=aarch64/neoverse_v1

eessi-bot-aws · 2025-11-18T15:02:09Z

New job on instance eessi-bot-mc-aws for repository eessi.io-2025.06-software
Building on: neoverse_v1
Building for: aarch64/neoverse_v1
Job dir: /project/def-users/SHARED/jobs/2025.11/pr_132/105690

date	job status	comment
Nov 18 15:02:08 UTC 2025	submitted	job id `105690` awaits release by job manager
Nov 18 15:02:44 UTC 2025	released	job awaits launch by Slurm scheduler
Nov 18 15:03:45 UTC 2025	finished	😁 SUCCESS (click triangle for details) Details ✅ job output file `slurm-105690.out` ✅ no message matching `FATAL:` ✅ no message matching `ERROR:` ✅ no message matching `FAILED:` ✅ no message matching `required modules missing:` ✅ found message(s) matching `No missing installations` ✅ found message matching `.tar.* created!` Artefacts `eessi-2025.06-software-linux-aarch64-neoverse_v1-17634781770.tar.zst` size: 0 MiB (22708 bytes) entries: 1 modules under 2025.06/software/linux/aarch64/neoverse_v1/modules/all no module files in tarball software under 2025.06/software/linux/aarch64/neoverse_v1/software no software packages in tarball reprod directories under 2025.06/software/linux/aarch64/neoverse_v1/reprod no reprod directories in tarball other under 2025.06/software/linux/aarch64/neoverse_v1 `2025.06/init/easybuild/eb_hooks.py`
Nov 18 15:03:45 UTC 2025	test result	😁 SUCCESS (click triangle for details) ReFrame Summary [ OK ] (1/4) EESSI_OSU_coll %benchmark_info=mpi.collective.osu_allreduce %module_name=OSU-Micro-Benchmarks/7.5-gompi-2025a %scale=1_node %device_type=cpu /e4bf9965 @BotBuildTests:aarch64_neoverse_v1+default P: latency: 1.61 us (r:0, l:None, u:None) [ OK ] (2/4) EESSI_OSU_coll %benchmark_info=mpi.collective.osu_alltoall %module_name=OSU-Micro-Benchmarks/7.5-gompi-2025a %scale=1_node %device_type=cpu /3da4890b @BotBuildTests:aarch64_neoverse_v1+default P: latency: 4.74 us (r:0, l:None, u:None) [ OK ] (3/4) EESSI_OSU_pt2pt_CPU %benchmark_info=mpi.pt2pt.osu_latency %module_name=OSU-Micro-Benchmarks/7.5-gompi-2025a %scale=1_node /3255009a @BotBuildTests:aarch64_neoverse_v1+default P: latency: 0.24 us (r:0, l:None, u:None) [ OK ] (4/4) EESSI_OSU_pt2pt_CPU %benchmark_info=mpi.pt2pt.osu_bw %module_name=OSU-Micro-Benchmarks/7.5-gompi-2025a %scale=1_node /59f4b331 @BotBuildTests:aarch64_neoverse_v1+default P: bandwidth: 29017.12 MB/s (r:0, l:None, u:None) [ PASSED ] Ran 4/4 test case(s) from 4 check(s) (0 failure(s), 0 skipped, 0 aborted) Details ✅ job output file `slurm-105690.out` ✅ no message matching `ERROR:` ✅ no message matching `[\sFAILED\s].Ran . test case`

…emove_gromacs_sve_workaround

bedroge · 2025-11-21T10:40:27Z

bot: build repo:eessi.io-2023.06-software instance:eessi-bot-mc-aws for:arch=aarch64/neoverse_v1
bot: build repo:eessi.io-2023.06-software instance:eessi-bot-jsc for:arch=aarch64/nvidia/grace
bot: build repo:eessi.io-2025.06-software instance:eessi-bot-mc-aws for:arch=aarch64/neoverse_v1

eessi-bot-aws · 2025-11-21T10:40:34Z

New job on instance eessi-bot-mc-aws for repository eessi.io-2023.06-software
Building on: neoverse_v1
Building for: aarch64/neoverse_v1
Job dir: /project/def-users/SHARED/jobs/2025.11/pr_132/106582

date	job status	comment
Nov 21 10:40:33 UTC 2025	submitted	job id `106582` awaits release by job manager
Nov 21 10:40:49 UTC 2025	released	job awaits launch by Slurm scheduler
Nov 21 10:45:54 UTC 2025	running	job `106582` is running
Nov 21 10:49:00 UTC 2025	finished	😁 SUCCESS (click triangle for details) Details ✅ job output file `slurm-106582.out` ✅ no message matching `FATAL:` ✅ no message matching `ERROR:` ✅ no message matching `FAILED:` ✅ no message matching `required modules missing:` ✅ found message(s) matching `No missing installations` ✅ found message matching `.tar.* created!` Artefacts `eessi-2023.06-software-linux-aarch64-neoverse_v1-17637219610.tar.zst` size: 0 MiB (22797 bytes) entries: 1 modules under 2023.06/software/linux/aarch64/neoverse_v1/modules/all no module files in tarball software under 2023.06/software/linux/aarch64/neoverse_v1/software no software packages in tarball reprod directories under 2023.06/software/linux/aarch64/neoverse_v1/reprod no reprod directories in tarball other under 2023.06/software/linux/aarch64/neoverse_v1 `2023.06/init/easybuild/eb_hooks.py`
Nov 21 10:49:00 UTC 2025	test result	😁 SUCCESS (click triangle for details) ReFrame Summary [ OK ] ( 1/10) EESSI_LAMMPS_lj %device_type=cpu %module_name=LAMMPS/29Aug2024-foss-2023b-kokkos %scale=1_node /aeb2d9df @BotBuildTests:aarch64_neoverse_v1+default P: perf: 982.505 timesteps/s (r:0, l:None, u:None) [ OK ] ( 2/10) EESSI_LAMMPS_lj %device_type=cpu %module_name=LAMMPS/2Aug2023_update2-foss-2023a-kokkos %scale=1_node /04ff9ece @BotBuildTests:aarch64_neoverse_v1+default P: perf: 928.839 timesteps/s (r:0, l:None, u:None) [ OK ] ( 3/10) EESSI_OSU_coll %benchmark_info=mpi.collective.osu_allreduce %module_name=OSU-Micro-Benchmarks/7.2-gompi-2023b %scale=1_node %device_type=cpu /775175bf @BotBuildTests:aarch64_neoverse_v1+default P: latency: 3.21 us (r:0, l:None, u:None) [ OK ] ( 4/10) EESSI_OSU_coll %benchmark_info=mpi.collective.osu_allreduce %module_name=OSU-Micro-Benchmarks/7.1-1-gompi-2023a %scale=1_node %device_type=cpu /52707c40 @BotBuildTests:aarch64_neoverse_v1+default P: latency: 2.96 us (r:0, l:None, u:None) [ OK ] ( 5/10) EESSI_OSU_coll %benchmark_info=mpi.collective.osu_alltoall %module_name=OSU-Micro-Benchmarks/7.2-gompi-2023b %scale=1_node %device_type=cpu /b1aacda9 @BotBuildTests:aarch64_neoverse_v1+default P: latency: 5.02 us (r:0, l:None, u:None) [ OK ] ( 6/10) EESSI_OSU_coll %benchmark_info=mpi.collective.osu_alltoall %module_name=OSU-Micro-Benchmarks/7.1-1-gompi-2023a %scale=1_node %device_type=cpu /c6bad193 @BotBuildTests:aarch64_neoverse_v1+default P: latency: 4.24 us (r:0, l:None, u:None) [ OK ] ( 7/10) EESSI_OSU_pt2pt_CPU %benchmark_info=mpi.pt2pt.osu_latency %module_name=OSU-Micro-Benchmarks/7.2-gompi-2023b %scale=1_node /15cad6c4 @BotBuildTests:aarch64_neoverse_v1+default P: latency: 0.39 us (r:0, l:None, u:None) [ OK ] ( 8/10) EESSI_OSU_pt2pt_CPU %benchmark_info=mpi.pt2pt.osu_latency %module_name=OSU-Micro-Benchmarks/7.1-1-gompi-2023a %scale=1_node /6672deda @BotBuildTests:aarch64_neoverse_v1+default P: latency: 0.39 us (r:0, l:None, u:None) [ OK ] ( 9/10) EESSI_OSU_pt2pt_CPU %benchmark_info=mpi.pt2pt.osu_bw %module_name=OSU-Micro-Benchmarks/7.2-gompi-2023b %scale=1_node /2a9a47b1 @BotBuildTests:aarch64_neoverse_v1+default P: bandwidth: 30362.03 MB/s (r:0, l:None, u:None) [ OK ] (10/10) EESSI_OSU_pt2pt_CPU %benchmark_info=mpi.pt2pt.osu_bw %module_name=OSU-Micro-Benchmarks/7.1-1-gompi-2023a %scale=1_node /1b24ab8e @BotBuildTests:aarch64_neoverse_v1+default P: bandwidth: 23913.01 MB/s (r:0, l:None, u:None) [ PASSED ] Ran 10/10 test case(s) from 10 check(s) (0 failure(s), 0 skipped, 0 aborted) Details ✅ job output file `slurm-106582.out` ✅ no message matching `ERROR:` ✅ no message matching `[\sFAILED\s].Ran . test case`
Nov 21 15:27:15 UTC 2025	uploaded	transfer of `eessi-2023.06-software-linux-aarch64-neoverse_v1-17637219610.tar.zst` to S3 bucket succeeded

eessi-bot-jsc · 2025-11-21T10:40:36Z

New job on instance eessi-bot-jsc for repository eessi.io-2023.06-software
Building on: nvidia-grace
Building for: aarch64/nvidia/grace
Job dir: /p/project1/ceasybuilders/eessibot/jobs/2025.11/pr_132/14242193

date	job status	comment
Nov 21 10:40:34 UTC 2025	submitted	job id `14242193` awaits release by job manager
Nov 21 10:41:07 UTC 2025	released	job awaits launch by Slurm scheduler
Nov 21 10:42:10 UTC 2025	running	job `14242193` is running
Nov 21 10:51:28 UTC 2025	finished	😁 SUCCESS (click triangle for details) Details ✅ job output file `slurm-14242193.out` ✅ no message matching `FATAL:` ✅ no message matching `ERROR:` ✅ no message matching `FAILED:` ✅ no message matching `required modules missing:` ✅ found message(s) matching `No missing installations` ✅ found message matching `.tar.* created!` Artefacts `eessi-2023.06-software-linux-aarch64-nvidia-grace-17637217760.tar.gz` size: 0 MiB (21621 bytes) entries: 1 modules under 2023.06/software/linux/aarch64/nvidia/grace/modules/all no module files in tarball software under 2023.06/software/linux/aarch64/nvidia/grace/software no software packages in tarball reprod directories under 2023.06/software/linux/aarch64/nvidia/grace/reprod no reprod directories in tarball other under 2023.06/software/linux/aarch64/nvidia/grace `2023.06/init/easybuild/eb_hooks.py`
Nov 21 10:51:28 UTC 2025	test result	😁 SUCCESS (click triangle for details) ReFrame Summary [ SKIP ] ( 1/28) Skipping GPU test : only 1 GPU available for this test case [ SKIP ] ( 2/28) Skipping GPU test : only 1 GPU available for this test case [ SKIP ] ( 3/28) Skipping GPU test : only 1 GPU available for this test case [ SKIP ] ( 4/28) Skipping GPU test : only 1 GPU available for this test case [ SKIP ] ( 5/28) Skipping GPU test : only 1 GPU available for this test case [ SKIP ] ( 6/28) Skipping GPU test : only 1 GPU available for this test case [ SKIP ] ( 7/28) Skipping GPU test : only 1 GPU available for this test case [ SKIP ] ( 8/28) Skipping GPU test : only 1 GPU available for this test case [ OK ] ( 9/28) EESSI_LAMMPS_lj %device_type=gpu %module_name=LAMMPS/2Aug2023_update2-foss-2023a-kokkos-CUDA-12.1.1 %scale=1_node /1f2ca7c1 @BotBuildTests:aarch64_nvidia_grace+default P: perf: 7169.526 timesteps/s (r:0, l:None, u:None) [ OK ] (10/28) EESSI_LAMMPS_lj %device_type=cpu %module_name=LAMMPS/29Aug2024-foss-2023b-kokkos %scale=1_node /aeb2d9df @BotBuildTests:aarch64_nvidia_grace+default P: perf: 1533.404 timesteps/s (r:0, l:None, u:None) [ OK ] (11/28) EESSI_LAMMPS_lj %device_type=cpu %module_name=LAMMPS/2Aug2023_update2-foss-2023a-kokkos %scale=1_node /04ff9ece @BotBuildTests:aarch64_nvidia_grace+default P: perf: 1547.691 timesteps/s (r:0, l:None, u:None) [ OK ] (12/28) EESSI_LAMMPS_lj %device_type=cpu %module_name=LAMMPS/2Aug2023_update2-foss-2023a-kokkos-CUDA-12.1.1 %scale=1_node /b22a48f5 @BotBuildTests:aarch64_nvidia_grace+default P: perf: 1513.202 timesteps/s (r:0, l:None, u:None) [ OK ] (13/28) EESSI_OSU_coll %benchmark_info=mpi.collective.osu_allreduce %module_name=OSU-Micro-Benchmarks/7.2-gompi-2023b %scale=1_node %device_type=cpu /775175bf @BotBuildTests:aarch64_nvidia_grace+default P: latency: 4.79 us (r:0, l:None, u:None) [ OK ] (14/28) EESSI_OSU_coll %benchmark_info=mpi.collective.osu_allreduce %module_name=OSU-Micro-Benchmarks/7.1-1-gompi-2023a %scale=1_node %device_type=cpu /52707c40 @BotBuildTests:aarch64_nvidia_grace+default P: latency: 4.82 us (r:0, l:None, u:None) [ OK ] (15/28) EESSI_OSU_coll %benchmark_info=mpi.collective.osu_allreduce %module_name=OSU-Micro-Benchmarks/7.5-gompi-2023b-CUDA-12.4.0 %scale=1_node %device_type=cpu /95ac9526 @BotBuildTests:aarch64_nvidia_grace+default P: latency: 5.24 us (r:0, l:None, u:None) [ OK ] (16/28) EESSI_OSU_coll %benchmark_info=mpi.collective.osu_allreduce %module_name=OSU-Micro-Benchmarks/7.2-gompi-2023a-CUDA-12.1.1 %scale=1_node %device_type=cpu /1cff5d41 @BotBuildTests:aarch64_nvidia_grace+default P: latency: 5.26 us (r:0, l:None, u:None) [ OK ] (17/28) EESSI_OSU_coll %benchmark_info=mpi.collective.osu_alltoall %module_name=OSU-Micro-Benchmarks/7.2-gompi-2023b %scale=1_node %device_type=cpu /b1aacda9 @BotBuildTests:aarch64_nvidia_grace+default P: latency: 6.93 us (r:0, l:None, u:None) [ OK ] (18/28) EESSI_OSU_coll %benchmark_info=mpi.collective.osu_alltoall %module_name=OSU-Micro-Benchmarks/7.1-1-gompi-2023a %scale=1_node %device_type=cpu /c6bad193 @BotBuildTests:aarch64_nvidia_grace+default P: latency: 7.14 us (r:0, l:None, u:None) [ OK ] (19/28) EESSI_OSU_coll %benchmark_info=mpi.collective.osu_alltoall %module_name=OSU-Micro-Benchmarks/7.5-gompi-2023b-CUDA-12.4.0 %scale=1_node %device_type=cpu /0edb8a95 @BotBuildTests:aarch64_nvidia_grace+default P: latency: 8.58 us (r:0, l:None, u:None) [ OK ] (20/28) EESSI_OSU_coll %benchmark_info=mpi.collective.osu_alltoall %module_name=OSU-Micro-Benchmarks/7.2-gompi-2023a-CUDA-12.1.1 %scale=1_node %device_type=cpu /b2ab2213 @BotBuildTests:aarch64_nvidia_grace+default P: latency: 8.69 us (r:0, l:None, u:None) [ OK ] (21/28) EESSI_OSU_pt2pt_CPU %benchmark_info=mpi.pt2pt.osu_latency %module_name=OSU-Micro-Benchmarks/7.2-gompi-2023b %scale=1_node /15cad6c4 @BotBuildTests:aarch64_nvidia_grace+default P: latency: 0.47 us (r:0, l:None, u:None) [ OK ] (22/28) EESSI_OSU_pt2pt_CPU %benchmark_info=mpi.pt2pt.osu_latency %module_name=OSU-Micro-Benchmarks/7.1-1-gompi-2023a %scale=1_node /6672deda @BotBuildTests:aarch64_nvidia_grace+default P: latency: 0.47 us (r:0, l:None, u:None) [ OK ] (23/28) EESSI_OSU_pt2pt_CPU %benchmark_info=mpi.pt2pt.osu_latency %module_name=OSU-Micro-Benchmarks/7.5-gompi-2023b-CUDA-12.4.0 %scale=1_node /8ec94746 @BotBuildTests:aarch64_nvidia_grace+default P: latency: 0.48 us (r:0, l:None, u:None) [ OK ] (24/28) EESSI_OSU_pt2pt_CPU %benchmark_info=mpi.pt2pt.osu_latency %module_name=OSU-Micro-Benchmarks/7.2-gompi-2023a-CUDA-12.1.1 %scale=1_node /1a3a497b @BotBuildTests:aarch64_nvidia_grace+default P: latency: 0.51 us (r:0, l:None, u:None) [ OK ] (25/28) EESSI_OSU_pt2pt_CPU %benchmark_info=mpi.pt2pt.osu_bw %module_name=OSU-Micro-Benchmarks/7.2-gompi-2023b %scale=1_node /2a9a47b1 @BotBuildTests:aarch64_nvidia_grace+default P: bandwidth: 40920.81 MB/s (r:0, l:None, u:None) [ OK ] (26/28) EESSI_OSU_pt2pt_CPU %benchmark_info=mpi.pt2pt.osu_bw %module_name=OSU-Micro-Benchmarks/7.1-1-gompi-2023a %scale=1_node /1b24ab8e @BotBuildTests:aarch64_nvidia_grace+default P: bandwidth: 41386.0 MB/s (r:0, l:None, u:None) [ OK ] (27/28) EESSI_OSU_pt2pt_CPU %benchmark_info=mpi.pt2pt.osu_bw %module_name=OSU-Micro-Benchmarks/7.5-gompi-2023b-CUDA-12.4.0 %scale=1_node /c9ca6dc1 @BotBuildTests:aarch64_nvidia_grace+default P: bandwidth: 41826.97 MB/s (r:0, l:None, u:None) [ OK ] (28/28) EESSI_OSU_pt2pt_CPU %benchmark_info=mpi.pt2pt.osu_bw %module_name=OSU-Micro-Benchmarks/7.2-gompi-2023a-CUDA-12.1.1 %scale=1_node /17289b2f @BotBuildTests:aarch64_nvidia_grace+default P: bandwidth: 42372.29 MB/s (r:0, l:None, u:None) [ PASSED ] Ran 20/28 test case(s) from 28 check(s) (0 failure(s), 8 skipped, 0 aborted) Details ✅ job output file `slurm-14242193.out` ✅ no message matching `ERROR:` ✅ no message matching `[\sFAILED\s].Ran . test case`
Nov 21 15:27:17 UTC 2025	uploaded	transfer of `eessi-2023.06-software-linux-aarch64-nvidia-grace-17637217760.tar.gz` to S3 bucket succeeded

eessi-bot-aws · 2025-11-21T10:40:39Z

New job on instance eessi-bot-mc-aws for repository eessi.io-2025.06-software
Building on: neoverse_v1
Building for: aarch64/neoverse_v1
Job dir: /project/def-users/SHARED/jobs/2025.11/pr_132/106583

date	job status	comment
Nov 21 10:40:38 UTC 2025	submitted	job id `106583` awaits release by job manager
Nov 21 10:40:47 UTC 2025	released	job awaits launch by Slurm scheduler
Nov 21 10:45:52 UTC 2025	running	job `106583` is running
Nov 21 10:46:56 UTC 2025	finished	😁 SUCCESS (click triangle for details) Details ✅ job output file `slurm-106583.out` ✅ no message matching `FATAL:` ✅ no message matching `ERROR:` ✅ no message matching `FAILED:` ✅ no message matching `required modules missing:` ✅ found message(s) matching `No missing installations` ✅ found message matching `.tar.* created!` Artefacts `eessi-2025.06-software-linux-aarch64-neoverse_v1-17637219510.tar.zst` size: 0 MiB (22799 bytes) entries: 1 modules under 2025.06/software/linux/aarch64/neoverse_v1/modules/all no module files in tarball software under 2025.06/software/linux/aarch64/neoverse_v1/software no software packages in tarball reprod directories under 2025.06/software/linux/aarch64/neoverse_v1/reprod no reprod directories in tarball other under 2025.06/software/linux/aarch64/neoverse_v1 `2025.06/init/easybuild/eb_hooks.py`
Nov 21 10:46:56 UTC 2025	test result	😁 SUCCESS (click triangle for details) ReFrame Summary [ OK ] (1/4) EESSI_OSU_coll %benchmark_info=mpi.collective.osu_allreduce %module_name=OSU-Micro-Benchmarks/7.5-gompi-2025a %scale=1_node %device_type=cpu /e4bf9965 @BotBuildTests:aarch64_neoverse_v1+default P: latency: 1.58 us (r:0, l:None, u:None) [ OK ] (2/4) EESSI_OSU_coll %benchmark_info=mpi.collective.osu_alltoall %module_name=OSU-Micro-Benchmarks/7.5-gompi-2025a %scale=1_node %device_type=cpu /3da4890b @BotBuildTests:aarch64_neoverse_v1+default P: latency: 4.76 us (r:0, l:None, u:None) [ OK ] (3/4) EESSI_OSU_pt2pt_CPU %benchmark_info=mpi.pt2pt.osu_latency %module_name=OSU-Micro-Benchmarks/7.5-gompi-2025a %scale=1_node /3255009a @BotBuildTests:aarch64_neoverse_v1+default P: latency: 0.26 us (r:0, l:None, u:None) [ OK ] (4/4) EESSI_OSU_pt2pt_CPU %benchmark_info=mpi.pt2pt.osu_bw %module_name=OSU-Micro-Benchmarks/7.5-gompi-2025a %scale=1_node /59f4b331 @BotBuildTests:aarch64_neoverse_v1+default P: bandwidth: 29224.59 MB/s (r:0, l:None, u:None) [ PASSED ] Ran 4/4 test case(s) from 4 check(s) (0 failure(s), 0 skipped, 0 aborted) Details ✅ job output file `slurm-106583.out` ✅ no message matching `ERROR:` ✅ no message matching `[\sFAILED\s].Ran . test case`
Nov 21 15:27:24 UTC 2025	uploaded	transfer of `eessi-2025.06-software-linux-aarch64-neoverse_v1-17637219510.tar.zst` to S3 bucket succeeded

ocaisa

LGTM

boegel · 2025-11-21T16:27:57Z

I guess this was accidentally built & deploy twice for EESSI version 2023.06, but no harm done since the eb_hooks.py was identical in both?

bedroge · 2025-11-21T16:32:11Z

I guess this was accidentally built & deploy twice for EESSI version 2023.06, but no harm done since the eb_hooks.py was identical in both?

It was built twice because I wanted to do test builds with GROMACS for both Neoverse V1 and Grace. To prevent a tarball with GROMACS from getting deployed, I did the final builds for both targets as well, otherwise I had to close the PR and make a new one. We could have set one tarball to REJECTED in the staging PR, but there's indeed no harm in deploying the exact same thing twice.

bedroge added 2 commits November 18, 2025 09:30

disable GROMACS pre_configure_hook

e2d369f

add easystack for testing purposes

e20ef88

bedroge marked this pull request as draft November 18, 2025 08:34

test 2024.3+4 on Grace

e991a0c

bedroge added 2 commits November 18, 2025 15:46

remove GROMACS hook

a52f5f4

remove easystack

e219d0b

bedroge marked this pull request as ready for review November 18, 2025 14:48

Merge branch 'main' of github.com:EESSI/software-layer-scripts into r…

71ba332

…emove_gromacs_sve_workaround

bedroge added ready-to-deploy ready-to-review labels Nov 21, 2025

ocaisa approved these changes Nov 21, 2025

View reviewed changes

ocaisa added bot:deploy and removed ready-to-deploy ready-to-review labels Nov 21, 2025

ocaisa merged commit c8f0094 into EESSI:main Nov 21, 2025
76 of 82 checks passed

bedroge deleted the remove_gromacs_sve_workaround branch November 21, 2025 16:28

Remove workaround/hook for GROMACS SVE issue #132

Remove workaround/hook for GROMACS SVE issue #132

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eessi-bot-aws bot commented Nov 18, 2025 •

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eessi-bot-jsc bot commented Nov 18, 2025 •

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eessi-bot-aws bot commented Nov 18, 2025 •

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eessi-bot-aws bot commented Nov 21, 2025 •

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eessi-bot-aws bot commented Nov 21, 2025 •

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