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@HumanCellAtlas

Human Cell Atlas

An open international collaboration to create comprehensive reference maps of all human cells

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  1. metadata-schema metadata-schema Public

    This repo is for the metadata schemas associated with the HCA

    Python 67 32

  2. dcp2 dcp2 Public

    Shared artifacts concerning the Human Cell Atlas (HCA) Data Coordination Platform (DCP)

    4 2

Repositories

Showing 10 of 121 repositories
  • sctools Public

    Utilities for large scale distributed single cell data processing

    HumanCellAtlas/sctools’s past year of commit activity
    Python 24 BSD-3-Clause 8 13 27 Updated May 8, 2025
  • dcp-diag Public

    Development and operations diagnostic tools and libraries

    HumanCellAtlas/dcp-diag’s past year of commit activity
    Python 2 MIT 1 6 26 Updated May 8, 2025
  • dcp Public

    Data Coordination Platform manifest and integration tests.

    HumanCellAtlas/dcp’s past year of commit activity
    Python 3 1 115 19 Updated May 7, 2025
  • lira Public

    Notification listener for secondary analyses

    HumanCellAtlas/lira’s past year of commit activity
    Python 5 BSD-3-Clause 3 0 30 Updated May 7, 2025
  • data-consumer-vignettes Public

    Simple walk-throughs of interacting with the DCP as a downstream data consumer.

    HumanCellAtlas/data-consumer-vignettes’s past year of commit activity
    Jupyter Notebook 17 MIT 5 25 93 Updated May 5, 2025
  • secondary-analysis Public

    Secondary Analysis Service of the Human Cell Atlas Data Coordination Platform

    HumanCellAtlas/secondary-analysis’s past year of commit activity
    Python 3 BSD-3-Clause 2 124 129 Updated May 5, 2025
  • logs Public

    Infrastructure for centralizing and indexing logs

    HumanCellAtlas/logs’s past year of commit activity
    Python 2 MIT 2 3 145 Updated May 4, 2025
  • metadata-schema Public

    This repo is for the metadata schemas associated with the HCA

    HumanCellAtlas/metadata-schema’s past year of commit activity
    Python 67 Apache-2.0 32 85 (3 issues need help) 51 Updated Apr 29, 2025
  • falcon Public

    The workflow starter of secondary analysis service

    HumanCellAtlas/falcon’s past year of commit activity
    Python 3 BSD-3-Clause 1 0 30 Updated Mar 28, 2025
  • skylab Public

    Soon to be deprecated in favor of broadinstitute/warp github repo. Previously: Secondary analysis pipelines

    HumanCellAtlas/skylab’s past year of commit activity
    WDL 48 BSD-3-Clause 34 1 19 Updated Mar 13, 2025
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