metadata-schema/json_schema/module/biomaterial/reproduction_history.json at d9bcedc386983ae91366bc74aca3508f4e7cc215 · HumanCellAtlas/metadata-schema · GitHub

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{
    "$schema": "http://json-schema.org/draft-07/schema#",
    "description": "Reproduction history of the donor.",
    "additionalProperties": false,
    "minProperties": 1,
    "title": "Reproduction history",
    "name": "reproduction_history",
    "type": "object",
    "properties": {
        "describedBy": {
            "description": "The URL reference to the schema.",
            "type": "string",
            "pattern" : "^(http|https)://schema.(.*?)humancellatlas.org/module/biomaterial/(([0-9]{1,}.[0-9]{1,}.[0-9]{1,})|([a-zA-Z]*?))/human_specific"
        },
        "schema_version": {
            "description": "The version number of the schema in major.minor.patch format.",
            "type": "string",
            "pattern": "^[0-9]{1,}.[0-9]{1,}.[0-9]{1,}$",
            "example": "4.6.1"
        },
        "menarche_age": {
            "description": "Age at menarche, rounded to nearest whole number.",
            "type": "integer",
            "user_friendly": "Menarche age",
            "example": "13; 12; 16",
            "bionetworks": ["genetic diversity"]
        },
        "menopause_status": {
            "description": "Menopausal status of donor at time of sample collection.",
            "type": "string",
            "enum": [
                "pre-menopausal",
                "peri-menopausal",
                "post-menopausal",
                "post-menopausal (induced)"
            ],
            "user_friendly": "Menopause status",
            "example": "pre-menopausal; peri-menopausal; post-menopausal; post-menopausal (induced)",
            "guidelines": "Should be one of: pre-menopausal; peri-menopausal; post-menopausal; post-menopausal (induced)",
            "bionetworks": ["genetic diversity"]
        },
        "parity": {
            "description": "Number of children (full-term pregnancies) the donor has given birth to at time of sample collection.",
            "type": "integer",
            "user_friendly": "Full term pregnancy - parity",
            "example": "0; 2; 3",
            "bionetworks": ["genetic diversity"]
        },
        "gravidity": {
            "description": "Number of pregnancies the donor has had at time of sample collection.",
            "type": "integer",
            "user_friendly": "Pregnancy - gravidity",
            "example": "2; 3; 5",
            "bionetworks": ["genetic diversity"]
        }
    }
}