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6 changes: 6 additions & 0 deletions CHANGELOG.md
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@@ -1,3 +1,9 @@
## v0.9.0 (2026-01-29)

### Feat

- **update**: new field primaryId and country data changes

## v0.8.0 (2025-08-29)

### Feat
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2 changes: 1 addition & 1 deletion README.md
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@@ -1,4 +1,4 @@
[![release: 0.8.0](https://img.shields.io/badge/rel-0.8.0-blue.svg?style=flat-square)](https://github.com/LeibnizDSMZ/microbial-data-standard)
[![release: 0.9.0](https://img.shields.io/badge/rel-0.9.0-blue.svg?style=flat-square)](https://github.com/LeibnizDSMZ/microbial-data-standard)
[![MIT LICENSE](https://img.shields.io/badge/License-MIT-brightgreen.svg?style=flat-square)](https://choosealicense.com/licenses/mit/)
[![Documentation Status](https://img.shields.io/badge/docs-GitHub-blue.svg?style=flat-square)](https://LeibnizDSMZ.github.io/microbial-data-standard/)

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224 changes: 112 additions & 112 deletions configs/dev/requirements.dev.txt

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216 changes: 108 additions & 108 deletions configs/dev/requirements.test.txt

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5 changes: 4 additions & 1 deletion docs/graph.md
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Expand Up @@ -106,7 +106,8 @@ source: string
}

class `Country`{
name: string | CountryHistoricalAlpha2 | CountryOtherCodes
name: string | null
iso_3166_2: string | CountryHistoricalAlpha2 | CountryOtherCodes
identifier: array[Identifier]
conventionOfBiologicalDiversityParty: boolean | null
cartagenaProtocolParty: boolean | null
Expand Down Expand Up @@ -178,6 +179,7 @@ logo: string | null

class `Address`{
addressCountry: string | null
addressCountryIso: string | null
addressRegion: string | null
addressLocality: string | null
postOfficeBoxNumber: string | null
Expand Down Expand Up @@ -634,6 +636,7 @@ unknown
}

class `Strain`{
primaryId: string
organismType: OrganismType
morphType: Morph | null
typeStrain: array[TypeStrain]
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8 changes: 8 additions & 0 deletions docs/schema/01. primaryId.md
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@@ -0,0 +1,8 @@
---
## 01. primaryId
Primary Identifier `Required`

Description:
> Primary Identifier for this dataset

**string**
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@@ -1,5 +1,5 @@
---
## 01. organismType
## 02. organismType
OrganismType `Required`

Description:
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@@ -1,5 +1,5 @@
---
## 02. morphType
## 03. morphType
Morph Type

Description:
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@@ -1,17 +1,17 @@
---
## 03. typeStrain
## 04. typeStrain
Type Strain `Required`

**array[object]**

---
## 03.1. typeStrain.typeStrain
## 04.1. typeStrain.typeStrain
Type Strain `Required`

**boolean**

---
## 03.2. typeStrain.source
## 04.2. typeStrain.source
Source `Required`

Description:
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34 changes: 17 additions & 17 deletions docs/schema/04. taxon.md → docs/schema/05. taxon.md
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@@ -1,17 +1,17 @@
---
## 04. taxon
## 05. taxon
Taxon `Required`

**array[object]**

---
## 04.1. taxon.name
## 05.1. taxon.name
Name `Required`

**string**

---
## 04.2. taxon.taxonRank
## 05.2. taxon.taxonRank
Taxon Rank

**string, null**
Expand All @@ -29,7 +29,7 @@ Enum:
domain

---
## 04.3. taxon.taxonStatus
## 05.3. taxon.taxonStatus
Taxon Status

**string, null**
Expand All @@ -41,7 +41,7 @@ Enum:
validly published synonym

---
## 04.4. taxon.identifier
## 05.4. taxon.identifier
Identifier

Description:
Expand All @@ -50,7 +50,7 @@ Description:
**array[object]**

---
## 04.4.1. taxon.identifier.name
## 05.4.1. taxon.identifier.name
Name `Required`

Description:
Expand All @@ -59,7 +59,7 @@ Description:
**string**

---
## 04.4.2. taxon.identifier.value
## 05.4.2. taxon.identifier.value
Value `Required`

Description:
Expand All @@ -68,7 +68,7 @@ Description:
**string**

---
## 04.4.3. taxon.identifier.propertyID
## 05.4.3. taxon.identifier.propertyID
Property ID

Description:
Expand All @@ -77,7 +77,7 @@ Description:
**string, null**

---
## 04.4.4. taxon.identifier.url
## 05.4.4. taxon.identifier.url
URL

Description:
Expand All @@ -86,7 +86,7 @@ Description:
**string, null**

---
## 04.4.5. taxon.identifier.logo
## 05.4.5. taxon.identifier.logo
Logo

Description:
Expand All @@ -95,43 +95,43 @@ Description:
**string, null**

---
## 04.5. taxon.scientificName
## 05.5. taxon.scientificName
Scientific Name

**object, null**

---
## 04.5.1. taxon.scientificName.name
## 05.5.1. taxon.scientificName.name
Name `Required`

**string**

---
## 04.5.2. taxon.scientificName.author
## 05.5.2. taxon.scientificName.author
Author `Required`

**string**

---
## 04.6. taxon.alternateName
## 05.6. taxon.alternateName
Alternate Name

**array[string]**

---
## 04.7. taxon.parentTaxon
## 05.7. taxon.parentTaxon
Parent Taxon

**object, null**

---
## 04.8. taxon.sameAs
## 05.8. taxon.sameAs
Same As

**array[string]**

---
## 04.9. taxon.source
## 05.9. taxon.source
Source `Required`

Description:
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14 changes: 7 additions & 7 deletions docs/schema/05. identifier.md → docs/schema/06. identifier.md
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@@ -1,11 +1,11 @@
---
## 05. identifier
## 06. identifier
Identifier

**array[object]**

---
## 05.1. identifier.name
## 06.1. identifier.name
Name `Required`

Description:
Expand All @@ -14,7 +14,7 @@ Description:
**string**

---
## 05.2. identifier.value
## 06.2. identifier.value
Value `Required`

Description:
Expand All @@ -23,7 +23,7 @@ Description:
**string**

---
## 05.3. identifier.propertyID
## 06.3. identifier.propertyID
Property ID

Description:
Expand All @@ -32,7 +32,7 @@ Description:
**string, null**

---
## 05.4. identifier.url
## 06.4. identifier.url
URL

Description:
Expand All @@ -41,7 +41,7 @@ Description:
**string, null**

---
## 05.5. identifier.logo
## 06.5. identifier.logo
Logo

Description:
Expand All @@ -50,7 +50,7 @@ Description:
**string, null**

---
## 05.6. identifier.source
## 06.6. identifier.source
Source `Required`

Description:
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